RNA–Protein interactions for RNA: ENST00000489131.1

TOP3A-206, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-206ENST00000489131 HTN1P15515 57 aa9.22□□□□□ -0.93
TOP3A-206ENST00000489131 UFSP1Q6NVU6 142 aa9.22□□□□□ -0.93
TOP3A-206ENST00000489131 ORMDL3Q8N138 153 aa9.22□□□□□ -0.93
TOP3A-206ENST00000489131 LINC00612Q8N6U2 182 aa9.22□□□□□ -0.93
TOP3A-206ENST00000489131 C18orf15Q96N68 181 aa9.22□□□□□ -0.93
TOP3A-206ENST00000489131 C5orf52A6NGY3 159 aa9.21□□□□□ -0.94
TOP3A-206ENST00000489131 SRIP30626 198 aa9.21□□□□□ -0.94
TOP3A-206ENST00000489131 KIAA1644Q3SXP7 199 aa9.21□□□□□ -0.94
TOP3A-206ENST00000489131 C14orf178Q8N769 122 aaPredicted RBP9.21□□□□□ -0.94
TOP3A-206ENST00000489131 C18orf32Q8TCD1 76 aa9.21□□□□□ -0.94
TOP3A-206ENST00000489131 PRSS47A8MTI9 375 aa9.2□□□□□ -0.94
TOP3A-206ENST00000489131 D6R8Y8 96 aa9.2□□□□□ -0.94
TOP3A-206ENST00000489131 RHODO00212 210 aa9.2□□□□□ -0.94
TOP3A-206ENST00000489131 RS1O15537 224 aa9.2□□□□□ -0.94
TOP3A-206ENST00000489131 ESDP10768 282 aa9.2□□□□□ -0.94
TOP3A-206ENST00000489131 MIFP14174 115 aa9.2□□□□□ -0.94
TOP3A-206ENST00000489131 SSTP61278 116 aa9.2□□□□□ -0.94
TOP3A-206ENST00000489131 DEFB135Q30KP9 77 aa9.2□□□□□ -0.94
TOP3A-206ENST00000489131 ZFP2Q6ZN57 461 aa9.2□□□□□ -0.94
TOP3A-206ENST00000489131 CIDEAO60543 219 aa9.19□□□□□ -0.94
TOP3A-206ENST00000489131 SMIM17P0DL12 118 aa9.19□□□□□ -0.94
TOP3A-206ENST00000489131 Q8NAQ8 132 aa9.19□□□□□ -0.94
TOP3A-206ENST00000489131 JPT2Q9H910 190 aa9.19□□□□□ -0.94
TOP3A-206ENST00000489131 K7EIL1 84 aa9.18□□□□□ -0.94
TOP3A-206ENST00000489131 PPP1R17O96001 155 aa9.18□□□□□ -0.94
TOP3A-206ENST00000489131 S100A6P06703 90 aa9.18□□□□□ -0.94
TOP3A-206ENST00000489131 CKS2P33552 79 aa9.18□□□□□ -0.94
TOP3A-206ENST00000489131 CFAP126Q5VTH2 177 aa9.18□□□□□ -0.94
TOP3A-206ENST00000489131 NRACQ8N912 160 aa9.18□□□□□ -0.94
TOP3A-206ENST00000489131 OR11H2Q8NH07 326 aa9.18□□□□□ -0.94
TOP3A-206ENST00000489131 PRELID3AQ96N28 172 aa9.18□□□□□ -0.94
TOP3A-206ENST00000489131 SAMD10Q9BYL1 202 aa9.18□□□□□ -0.94
TOP3A-206ENST00000489131 TRAV4A0A0B4J268 109 aa9.17□□□□□ -0.94
TOP3A-206ENST00000489131 LINC01546A6NGU7 62 aa9.17□□□□□ -0.94
TOP3A-206ENST00000489131 LYRM9A8MSI8 78 aa9.17□□□□□ -0.94
TOP3A-206ENST00000489131 HOXA5P20719 270 aa9.17□□□□□ -0.94
TOP3A-206ENST00000489131 NDUFA6P56556 154 aa9.17□□□□□ -0.94
TOP3A-206ENST00000489131 LINC00310P59036 64 aa9.17□□□□□ -0.94
TOP3A-206ENST00000489131 RPL32P62910 135 aaKnown RBP9.17□□□□□ -0.94
TOP3A-206ENST00000489131 Q6ZTI0 123 aa9.17□□□□□ -0.94
TOP3A-206ENST00000489131 NOP10Q9NPE3 64 aaKnown RBP9.17□□□□□ -0.94
TOP3A-206ENST00000489131 MRPL16Q9NX20 251 aaKnown RBP9.17□□□□□ -0.94
TOP3A-206ENST00000489131 A0A087WWL8 130 aa9.16□□□□□ -0.94
TOP3A-206ENST00000489131 TRGV1A0A0A0MS02 117 aa9.16□□□□□ -0.94
TOP3A-206ENST00000489131 TRBV6-5A0A0K0K1A5 114 aa9.16□□□□□ -0.94
TOP3A-206ENST00000489131 TNFRSF6BO95407 300 aa9.16□□□□□ -0.94
TOP3A-206ENST00000489131 NPYP01303 97 aa9.16□□□□□ -0.94
TOP3A-206ENST00000489131 SUMO4Q6EEV6 95 aa9.16□□□□□ -0.94
TOP3A-206ENST00000489131 PACRGQ96M98 296 aaPredicted RBP9.16□□□□□ -0.94
TOP3A-206ENST00000489131 C20orf78Q9BR46 151 aa9.16□□□□□ -0.94
TOP3A-206ENST00000489131 NACAE9PAV3 2078 aa9.16□□□□□ -0.94
TOP3A-206ENST00000489131 IGHV4-28A0A0C4DH34 117 aa9.15□□□□□ -0.94
TOP3A-206ENST00000489131 M0QY20 66 aa9.15□□□□□ -0.94
TOP3A-206ENST00000489131 GAS8-AS1O95177 125 aa9.15□□□□□ -0.94
TOP3A-206ENST00000489131 IGHV3-53P01767 116 aa9.15□□□□□ -0.94
TOP3A-206ENST00000489131 SNRPEP62304 92 aaKnown RBP9.15□□□□□ -0.94
TOP3A-206ENST00000489131 CHCHD1Q96BP2 118 aaKnown RBP9.15□□□□□ -0.94
TOP3A-206ENST00000489131 URB1-AS1Q96HZ7 61 aa9.15□□□□□ -0.94
TOP3A-206ENST00000489131 MGAM2Q2M2H8 2515 aa9.15□□□□□ -0.94
TOP3A-206ENST00000489131 TRAV26-2A0A0B4J265 109 aa9.14□□□□□ -0.95
TOP3A-206ENST00000489131 SMKR1H3BMG3 65 aa9.14□□□□□ -0.95
TOP3A-206ENST00000489131 H7C1H1 209 aa9.14□□□□□ -0.95
TOP3A-206ENST00000489131 SERF1AO75920 110 aa9.14□□□□□ -0.95
TOP3A-206ENST00000489131 NCR2O95944 276 aa9.14□□□□□ -0.95
TOP3A-206ENST00000489131 MGPP08493 103 aa9.14□□□□□ -0.95
TOP3A-206ENST00000489131 BAGE3Q86Y29 109 aa9.14□□□□□ -0.95
TOP3A-206ENST00000489131 HIST3H2BBQ8N257 126 aa9.14□□□□□ -0.95
TOP3A-206ENST00000489131 TM2D3Q9BRN9 247 aa9.14□□□□□ -0.95
TOP3A-206ENST00000489131 C11orf68Q9H3H3 251 aaKnown RBP9.14□□□□□ -0.95
TOP3A-206ENST00000489131 IGLV2-18A0A075B6J9 118 aa9.13□□□□□ -0.95
TOP3A-206ENST00000489131 TEX48A0A1B0GUV7 120 aa9.13□□□□□ -0.95
TOP3A-206ENST00000489131 GATA1P15976 413 aaPredicted RBP9.13□□□□□ -0.95
TOP3A-206ENST00000489131 ZNF56Q15929 161 aa9.13□□□□□ -0.95
TOP3A-206ENST00000489131 IQCJQ1A5X6 159 aa9.13□□□□□ -0.95
TOP3A-206ENST00000489131 FAM74A4Q5TZK3 123 aa9.13□□□□□ -0.95
TOP3A-206ENST00000489131 OR4C5Q8NGB2 326 aa9.13□□□□□ -0.95
TOP3A-206ENST00000489131 MAP1LC3AQ9H492 121 aa9.13□□□□□ -0.95
TOP3A-206ENST00000489131 NXT2Q9NPJ8 142 aaKnown RBP9.13□□□□□ -0.95
TOP3A-206ENST00000489131 DKK2Q9UBU2 259 aa9.13□□□□□ -0.95
TOP3A-206ENST00000489131 NOTCH1P46531 2555 aa9.13□□□□□ -0.95
TOP3A-206ENST00000489131 LOC105371267A0A1B0GV96 52 aa9.12□□□□□ -0.95
TOP3A-206ENST00000489131 K7EMI3 77 aa9.12□□□□□ -0.95
TOP3A-206ENST00000489131 SUMO2P61956 95 aaKnown RBP9.12□□□□□ -0.95
TOP3A-206ENST00000489131 NIT1Q86X76 327 aa9.12□□□□□ -0.95
TOP3A-206ENST00000489131 TRBV10-1A0A0K0K1A3 114 aa9.11□□□□□ -0.95
TOP3A-206ENST00000489131 GAGE12BA1L429 117 aa9.11□□□□□ -0.95
TOP3A-206ENST00000489131 IFITM10A6NMD0 228 aa9.11□□□□□ -0.95
TOP3A-206ENST00000489131 F5H697 171 aa9.11□□□□□ -0.95
TOP3A-206ENST00000489131 NUPR1O60356 82 aa9.11□□□□□ -0.95
TOP3A-206ENST00000489131 GAGE7O76087 117 aa9.11□□□□□ -0.95
TOP3A-206ENST00000489131 LINC00614P0C842 121 aa9.11□□□□□ -0.95
TOP3A-206ENST00000489131 GAGE12FP0CL80 117 aa9.11□□□□□ -0.95
TOP3A-206ENST00000489131 GAGE12GP0CL81 117 aa9.11□□□□□ -0.95
TOP3A-206ENST00000489131 GAGE12IP0CL82 117 aa9.11□□□□□ -0.95
TOP3A-206ENST00000489131 POLR2KP53803 58 aaKnown RBP9.11□□□□□ -0.95
TOP3A-206ENST00000489131 SBSPONQ8IVN8 264 aa9.11□□□□□ -0.95
TOP3A-206ENST00000489131 Q8N8P6 123 aa9.11□□□□□ -0.95
TOP3A-206ENST00000489131 RPL39LQ96EH5 51 aaKnown RBP9.11□□□□□ -0.95
TOP3A-206ENST00000489131 DNAJC30Q96LL9 226 aa9.11□□□□□ -0.95
TOP3A-206ENST00000489131 SPATA25Q9BR10 227 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms