RNA–Protein interactions for RNA: ENST00000488912.5

COL21A1-211, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 2,327 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-211ENST00000488912 CRXO43186 299 aaPredicted RBP8.03□□□□□ -1.12
COL21A1-211ENST00000488912 ERASQ7Z444 233 aa8.03□□□□□ -1.12
COL21A1-211ENST00000488912 TRPT1Q86TN4 253 aaKnown RBP8.03□□□□□ -1.12
COL21A1-211ENST00000488912 NUDT3O95989 172 aa8.03□□□□□ -1.12
COL21A1-211ENST00000488912 IGLC6P0CF74 106 aa8.03□□□□□ -1.12
COL21A1-211ENST00000488912 ANXA2RQ3ZCQ2 193 aa8.03□□□□□ -1.12
COL21A1-211ENST00000488912 ATOH7Q8N100 152 aa8.03□□□□□ -1.12
COL21A1-211ENST00000488912 FAM19A2Q8N3H0 131 aa8.03□□□□□ -1.12
COL21A1-211ENST00000488912 PKD1L1Q8TDX9 2849 aa8.02□□□□□ -1.12
COL21A1-211ENST00000488912 CMYA5Q8N3K9 4069 aa8.02□□□□□ -1.13
COL21A1-211ENST00000488912 MUC21A0A0G2JKD1 596 aa8.02□□□□□ -1.13
COL21A1-211ENST00000488912 MUC21A0A140T8X8 626 aa8.02□□□□□ -1.13
COL21A1-211ENST00000488912 ARMS2P0C7Q2 107 aa8.02□□□□□ -1.13
COL21A1-211ENST00000488912 RBMY1A1P0DJD3 496 aaKnown RBP8.02□□□□□ -1.13
COL21A1-211ENST00000488912 RBMY1CP0DJD4 496 aa8.02□□□□□ -1.13
COL21A1-211ENST00000488912 SRIP30626 198 aa8.02□□□□□ -1.13
COL21A1-211ENST00000488912 RBMY1FQ15415 496 aaKnown RBP8.02□□□□□ -1.13
COL21A1-211ENST00000488912 LYZL1Q6UWQ5 148 aa8.02□□□□□ -1.13
COL21A1-211ENST00000488912 A0A1B0GXF2 115 aa8.02□□□□□ -1.13
COL21A1-211ENST00000488912 WIPF1O43516 503 aa8.02□□□□□ -1.13
COL21A1-211ENST00000488912 GTF2H5Q6ZYL4 71 aa8.02□□□□□ -1.13
COL21A1-211ENST00000488912 GTSCR1Q86UQ5 136 aa8.02□□□□□ -1.13
COL21A1-211ENST00000488912 ANK2Q01484 3957 aa8.01□□□□□ -1.13
COL21A1-211ENST00000488912 GAGE10A6NGK3 116 aa8.01□□□□□ -1.13
COL21A1-211ENST00000488912 CAMPP49913 170 aa8.01□□□□□ -1.13
COL21A1-211ENST00000488912 ATP5L2Q7Z4Y8 100 aa8.01□□□□□ -1.13
COL21A1-211ENST00000488912 A0A1B0GUT8 65 aa8.01□□□□□ -1.13
COL21A1-211ENST00000488912 HLA-DQA1P01909 254 aa8.01□□□□□ -1.13
COL21A1-211ENST00000488912 HBBP68871 147 aa8.01□□□□□ -1.13
COL21A1-211ENST00000488912 FAM159AQ6UWV7 190 aa8.01□□□□□ -1.13
COL21A1-211ENST00000488912 C18orf32Q8TCD1 76 aa8.01□□□□□ -1.13
COL21A1-211ENST00000488912 H3BVH4 76 aa8□□□□□ -1.13
COL21A1-211ENST00000488912 GNRH2O43555 120 aa8□□□□□ -1.13
COL21A1-211ENST00000488912 PRR31Q5SQ13 230 aa8□□□□□ -1.13
COL21A1-211ENST00000488912 MDFIQ99750 246 aa8□□□□□ -1.13
COL21A1-211ENST00000488912 SSBP4Q9BWG4 385 aaPredicted RBP8□□□□□ -1.13
COL21A1-211ENST00000488912 RPL35AP18077 110 aaKnown RBP8□□□□□ -1.13
COL21A1-211ENST00000488912 OXLD1Q5BKU9 147 aa8□□□□□ -1.13
COL21A1-211ENST00000488912 SLC25A34Q6PIV7 304 aa8□□□□□ -1.13
COL21A1-211ENST00000488912 RASL11AQ6T310 242 aa8□□□□□ -1.13
COL21A1-211ENST00000488912 SPATA12Q7Z6I5 190 aa8□□□□□ -1.13
COL21A1-211ENST00000488912 XCL2Q9UBD3 114 aa8□□□□□ -1.13
COL21A1-211ENST00000488912 MUC4Q99102 2169 aa7.99□□□□□ -1.13
COL21A1-211ENST00000488912 AZU1P20160 251 aa7.99□□□□□ -1.13
COL21A1-211ENST00000488912 ASIPP42127 132 aa7.99□□□□□ -1.13
COL21A1-211ENST00000488912 SIGMAR1Q99720 223 aa7.99□□□□□ -1.13
COL21A1-211ENST00000488912 TIMM8BQ9Y5J9 83 aaPredicted RBP7.99□□□□□ -1.13
COL21A1-211ENST00000488912 IGHV1OR15-1A0A075B7D0 117 aa7.98□□□□□ -1.13
COL21A1-211ENST00000488912 K7EP34 96 aa7.98□□□□□ -1.13
COL21A1-211ENST00000488912 INSP01308 110 aa7.98□□□□□ -1.13
COL21A1-211ENST00000488912 OR5AL1P0C617 328 aa7.98□□□□□ -1.13
COL21A1-211ENST00000488912 NTF3P20783 257 aa7.98□□□□□ -1.13
COL21A1-211ENST00000488912 SEC11AP67812 179 aa7.98□□□□□ -1.13
COL21A1-211ENST00000488912 SLAQ13239 276 aa7.98□□□□□ -1.13
COL21A1-211ENST00000488912 RIGQ13278 110 aa7.98□□□□□ -1.13
COL21A1-211ENST00000488912 OR10AG1Q8NH19 301 aa7.98□□□□□ -1.13
COL21A1-211ENST00000488912 CNFNQ9BYD5 112 aa7.98□□□□□ -1.13
COL21A1-211ENST00000488912 SPRY2O43597 315 aa7.98□□□□□ -1.13
COL21A1-211ENST00000488912 SNAI2O43623 268 aa7.98□□□□□ -1.13
COL21A1-211ENST00000488912 APCSP02743 223 aa7.98□□□□□ -1.13
COL21A1-211ENST00000488912 GIG44P09565 113 aaPredicted RBP7.98□□□□□ -1.13
COL21A1-211ENST00000488912 RNASE3P12724 160 aaKnown RBP7.98□□□□□ -1.13
COL21A1-211ENST00000488912 S100A4P26447 101 aaKnown RBP7.98□□□□□ -1.13
COL21A1-211ENST00000488912 Q8N1Y9 231 aa7.98□□□□□ -1.13
COL21A1-211ENST00000488912 MSRB1Q9NZV6 116 aa7.98□□□□□ -1.13
COL21A1-211ENST00000488912 SCRT2Q9NQ03 307 aa7.97□□□□□ -1.13
COL21A1-211ENST00000488912 TP73-AS1Q9UF72 201 aa7.97□□□□□ -1.13
COL21A1-211ENST00000488912 C9orf118A6NHY6 69 aa7.97□□□□□ -1.13
COL21A1-211ENST00000488912 PRM2P04554 102 aa7.97□□□□□ -1.13
COL21A1-211ENST00000488912 HTN1P15515 57 aa7.97□□□□□ -1.13
COL21A1-211ENST00000488912 TWIST1Q15672 202 aa7.97□□□□□ -1.13
COL21A1-211ENST00000488912 IGHV3-16A0A0C4DH30 117 aa7.96□□□□□ -1.13
COL21A1-211ENST00000488912 A0A1B0GW15 77 aa7.96□□□□□ -1.13
COL21A1-211ENST00000488912 H3BRM9 83 aa7.96□□□□□ -1.13
COL21A1-211ENST00000488912 CRYBA4P53673 196 aa7.96□□□□□ -1.13
COL21A1-211ENST00000488912 OR5A1Q8NGJ0 315 aa7.96□□□□□ -1.13
COL21A1-211ENST00000488912 MDFICQ9P1T7 246 aa7.96□□□□□ -1.13
COL21A1-211ENST00000488912 MED14OSP0DP75 135 aa7.96□□□□□ -1.14
COL21A1-211ENST00000488912 C1orf158Q8N1D5 194 aa7.96□□□□□ -1.14
COL21A1-211ENST00000488912 URB1-AS1Q96HZ7 61 aa7.96□□□□□ -1.14
COL21A1-211ENST00000488912 LINC01587Q99440 93 aa7.96□□□□□ -1.14
COL21A1-211ENST00000488912 PMCHL2Q9BQD1 86 aa7.96□□□□□ -1.14
COL21A1-211ENST00000488912 TMEM70Q9BUB7 260 aa7.96□□□□□ -1.14
COL21A1-211ENST00000488912 TRAV26-1A0A087WT03 109 aa7.95□□□□□ -1.14
COL21A1-211ENST00000488912 M0R381 172 aa7.95□□□□□ -1.14
COL21A1-211ENST00000488912 KRTAP10-11P60412 298 aa7.95□□□□□ -1.14
COL21A1-211ENST00000488912 SPANXN1Q5VSR9 72 aa7.95□□□□□ -1.14
COL21A1-211ENST00000488912 GATD1Q8NB37 220 aa7.95□□□□□ -1.14
COL21A1-211ENST00000488912 PHLDA3Q9Y5J5 127 aa7.95□□□□□ -1.14
COL21A1-211ENST00000488912 IGHV3OR16-12A0A075B7B8 117 aa7.95□□□□□ -1.14
COL21A1-211ENST00000488912 HSBP1O75506 76 aa7.95□□□□□ -1.14
COL21A1-211ENST00000488912 HSD52Q0P140 79 aa7.95□□□□□ -1.14
COL21A1-211ENST00000488912 MORN3Q6PF18 240 aaPredicted RBP7.95□□□□□ -1.14
COL21A1-211ENST00000488912 ZNF493Q6ZR52 646 aa7.95□□□□□ -1.14
COL21A1-211ENST00000488912 TRGV11A0A075B6L2 103 aa7.94□□□□□ -1.14
COL21A1-211ENST00000488912 IGHV4-4A0A075B6R2 117 aa7.94□□□□□ -1.14
COL21A1-211ENST00000488912 CKS1BP61024 79 aa7.94□□□□□ -1.14
COL21A1-211ENST00000488912 CACNG7P62955 275 aa7.94□□□□□ -1.14
COL21A1-211ENST00000488912 EGFEM1PQ0D2K5 195 aa7.94□□□□□ -1.14
COL21A1-211ENST00000488912 C9orf85Q96MD7 179 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms