RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 SEC11BP0C7V7 166 aa12.11□□□□□ -0.47
HDAC6-231ENST00000488905 LINC01620Q4KN68 170 aa12.11□□□□□ -0.47
HDAC6-231ENST00000488905 Q5BKY6 102 aa12.11□□□□□ -0.47
HDAC6-231ENST00000488905 SCXQ7RTU7 201 aa12.11□□□□□ -0.47
HDAC6-231ENST00000488905 HIST1H2BAQ96A08 127 aa12.11□□□□□ -0.47
HDAC6-231ENST00000488905 IGKV2D-24A0A075B6R9 120 aa12.1□□□□□ -0.47
HDAC6-231ENST00000488905 FAM74A7A6NL05 159 aa12.1□□□□□ -0.47
HDAC6-231ENST00000488905 SH2D1AO60880 128 aa12.1□□□□□ -0.47
HDAC6-231ENST00000488905 CRIP1P50238 77 aa12.1□□□□□ -0.47
HDAC6-231ENST00000488905 INO80EQ8NBZ0 244 aaPredicted RBP12.1□□□□□ -0.47
HDAC6-231ENST00000488905 DNAJC30Q96LL9 226 aa12.1□□□□□ -0.47
HDAC6-231ENST00000488905 NKX6-2Q9C056 277 aaPredicted RBP12.1□□□□□ -0.47
HDAC6-231ENST00000488905 A0A087WWL8 130 aa12.09□□□□□ -0.47
HDAC6-231ENST00000488905 BORCS7-ASMTA0A0B4J1R7 106 aa12.09□□□□□ -0.47
HDAC6-231ENST00000488905 GRIFINA4D1Z8 144 aa12.09□□□□□ -0.47
HDAC6-231ENST00000488905 KRTAP29-1A8MX34 341 aaPredicted RBP12.09□□□□□ -0.47
HDAC6-231ENST00000488905 PTTG1O95997 202 aa12.09□□□□□ -0.47
HDAC6-231ENST00000488905 GIPP09681 153 aaPredicted RBP12.09□□□□□ -0.47
HDAC6-231ENST00000488905 FAM162BQ5T6X4 162 aa12.09□□□□□ -0.47
HDAC6-231ENST00000488905 COX8CQ7Z4L0 72 aa12.09□□□□□ -0.47
HDAC6-231ENST00000488905 Q8N976 141 aa12.09□□□□□ -0.47
HDAC6-231ENST00000488905 DEFB104AQ8WTQ1 72 aa12.09□□□□□ -0.47
HDAC6-231ENST00000488905 SFRP2Q96HF1 295 aa12.09□□□□□ -0.47
HDAC6-231ENST00000488905 CHCHD7Q9BUK0 85 aa12.09□□□□□ -0.47
HDAC6-231ENST00000488905 KLK12Q9UKR0 248 aa12.09□□□□□ -0.47
HDAC6-231ENST00000488905 PHLDA3Q9Y5J5 127 aa12.09□□□□□ -0.47
HDAC6-231ENST00000488905 RBFOX3A6NFN3 312 aa12.08□□□□□ -0.48
HDAC6-231ENST00000488905 ZFP30Q9Y2G7 519 aa12.08□□□□□ -0.48
HDAC6-231ENST00000488905 A0A087WX48 190 aa12.07□□□□□ -0.48
HDAC6-231ENST00000488905 FXYD6-FXYD2A0A087WZ82 144 aa12.07□□□□□ -0.48
HDAC6-231ENST00000488905 M0R381 172 aa12.07□□□□□ -0.48
HDAC6-231ENST00000488905 TPT1P13693 172 aaKnown RBP12.07□□□□□ -0.48
HDAC6-231ENST00000488905 LINC01559Q495D7 138 aa12.07□□□□□ -0.48
HDAC6-231ENST00000488905 AKR1C8PQ5T2L2 129 aa12.07□□□□□ -0.48
HDAC6-231ENST00000488905 UBE2WQ96B02 151 aa12.07□□□□□ -0.48
HDAC6-231ENST00000488905 FMC1Q96HJ9 113 aa12.07□□□□□ -0.48
HDAC6-231ENST00000488905 HMCN2Q8NDA2 5059 aa12.06□□□□□ -0.48
HDAC6-231ENST00000488905 TRBV10-1A0A0K0K1A3 114 aa12.06□□□□□ -0.48
HDAC6-231ENST00000488905 UBE2G1P62253 170 aa12.06□□□□□ -0.48
HDAC6-231ENST00000488905 ATRAIDQ6UW56 229 aa12.06□□□□□ -0.48
HDAC6-231ENST00000488905 ZFP82Q8N141 532 aa12.06□□□□□ -0.48
HDAC6-231ENST00000488905 TMSB15BA0A087X1C1 80 aa12.05□□□□□ -0.48
HDAC6-231ENST00000488905 RPL36AP83881 106 aaKnown RBP12.05□□□□□ -0.48
HDAC6-231ENST00000488905 ELOBQ15370 118 aa12.05□□□□□ -0.48
HDAC6-231ENST00000488905 ZNF674Q2M3X9 581 aa12.05□□□□□ -0.48
HDAC6-231ENST00000488905 KCNIP4Q6PIL6 250 aa12.05□□□□□ -0.48
HDAC6-231ENST00000488905 RPL36ALQ969Q0 106 aaKnown RBP12.05□□□□□ -0.48
HDAC6-231ENST00000488905 CHAC1Q9BUX1 264 aa12.05□□□□□ -0.48
HDAC6-231ENST00000488905 MAP1LC3B2A6NCE7 125 aa12.04□□□□□ -0.48
HDAC6-231ENST00000488905 LTAP01374 205 aa12.04□□□□□ -0.48
HDAC6-231ENST00000488905 UBE2D3P61077 147 aa12.04□□□□□ -0.48
HDAC6-231ENST00000488905 UBE2D2P62837 147 aa12.04□□□□□ -0.48
HDAC6-231ENST00000488905 TCEAL7Q9BRU2 100 aa12.04□□□□□ -0.48
HDAC6-231ENST00000488905 MAP1LC3BQ9GZQ8 125 aa12.04□□□□□ -0.48
HDAC6-231ENST00000488905 TRBV7-3A0A075B6L6 115 aa12.03□□□□□ -0.48
HDAC6-231ENST00000488905 TRBV6-1A0A0K0K1D8 114 aa12.03□□□□□ -0.48
HDAC6-231ENST00000488905 KRTAP10-4P60372 401 aaPredicted RBP12.03□□□□□ -0.48
HDAC6-231ENST00000488905 Q0VG73 95 aa12.02□□□□□ -0.49
HDAC6-231ENST00000488905 OR10G8Q8NGN5 311 aa12.02□□□□□ -0.49
HDAC6-231ENST00000488905 FHITP49789 147 aa12.01□□□□□ -0.49
HDAC6-231ENST00000488905 CIRBP-AS1Q8TBR5 109 aa12.01□□□□□ -0.49
HDAC6-231ENST00000488905 C1orf43Q9BWL3 253 aa12.01□□□□□ -0.49
HDAC6-231ENST00000488905 TRBV6-8A0A0A6YYG3 113 aa12□□□□□ -0.49
HDAC6-231ENST00000488905 CRPP02741 224 aa12□□□□□ -0.49
HDAC6-231ENST00000488905 AKR1C3P42330 323 aa12□□□□□ -0.49
HDAC6-231ENST00000488905 C14orf177Q52M58 125 aa12□□□□□ -0.49
HDAC6-231ENST00000488905 CST9LP1Q5W188 147 aa12□□□□□ -0.49
HDAC6-231ENST00000488905 G3V3Q6 166 aa11.99□□□□□ -0.49
HDAC6-231ENST00000488905 ZNF56Q15929 161 aa11.99□□□□□ -0.49
HDAC6-231ENST00000488905 MPV17L2Q567V2 206 aa11.99□□□□□ -0.49
HDAC6-231ENST00000488905 STOML3Q8TAV4 291 aa11.99□□□□□ -0.49
HDAC6-231ENST00000488905 TMEM262E9PQX1 116 aa11.98□□□□□ -0.49
HDAC6-231ENST00000488905 IGLV2-8P01709 118 aa11.98□□□□□ -0.49
HDAC6-231ENST00000488905 RAB4BP61018 213 aa11.98□□□□□ -0.49
HDAC6-231ENST00000488905 ENHOQ6UWT2 76 aa11.98□□□□□ -0.49
HDAC6-231ENST00000488905 C15orf54Q8N8G6 183 aa11.98□□□□□ -0.49
HDAC6-231ENST00000488905 NEXN-AS1Q8NBZ9 246 aa11.98□□□□□ -0.49
HDAC6-231ENST00000488905 RPL19P84098 196 aaKnown RBP11.97□□□□□ -0.49
HDAC6-231ENST00000488905 PRR27Q6MZM9 219 aa11.97□□□□□ -0.49
HDAC6-231ENST00000488905 OR10AG1Q8NH19 301 aa11.97□□□□□ -0.49
HDAC6-231ENST00000488905 CYTL1Q9NRR1 136 aa11.97□□□□□ -0.49
HDAC6-231ENST00000488905 ARPC5O15511 151 aa11.96□□□□□ -0.49
HDAC6-231ENST00000488905 ANGP03950 147 aaKnown RBP11.96□□□□□ -0.49
HDAC6-231ENST00000488905 CXCL1P09341 107 aa11.96□□□□□ -0.49
HDAC6-231ENST00000488905 PAGE4O60829 102 aa11.95□□□□□ -0.5
HDAC6-231ENST00000488905 HLA-DQA1P01909 254 aa11.95□□□□□ -0.5
HDAC6-231ENST00000488905 PKIAP61925 76 aa11.95□□□□□ -0.5
HDAC6-231ENST00000488905 BATF3Q9NR55 127 aa11.95□□□□□ -0.5
HDAC6-231ENST00000488905 USP17L23D6RBM5 183 aa11.94□□□□□ -0.5
HDAC6-231ENST00000488905 SNAI2O43623 268 aa11.94□□□□□ -0.5
HDAC6-231ENST00000488905 OXTP01178 125 aa11.94□□□□□ -0.5
HDAC6-231ENST00000488905 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.94□□□□□ -0.5
HDAC6-231ENST00000488905 CHCHD5Q9BSY4 110 aa11.94□□□□□ -0.5
HDAC6-231ENST00000488905 ZNF471Q9BX82 626 aaPredicted RBP11.94□□□□□ -0.5
HDAC6-231ENST00000488905 UBR4Q5T4S7 5183 aa11.94□□□□□ -0.5
HDAC6-231ENST00000488905 SCO2A0A1W2PP80 73 aa11.93□□□□□ -0.5
HDAC6-231ENST00000488905 S100A9P06702 114 aaKnown RBP11.93□□□□□ -0.5
HDAC6-231ENST00000488905 MIAQ16674 131 aa11.93□□□□□ -0.5
HDAC6-231ENST00000488905 SERTAD4-AS1Q5TG53 156 aa11.93□□□□□ -0.5
HDAC6-231ENST00000488905 OR5AL1P0C617 328 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms