RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 FAM74A4Q5TZK3 123 aa12.38□□□□□ -0.43
GGPS1-206ENST00000488594 HSD17B11Q8NBQ5 300 aa12.38□□□□□ -0.43
GGPS1-206ENST00000488594 OR11H4Q8NGC9 324 aa12.38□□□□□ -0.43
GGPS1-206ENST00000488594 C1orf43Q9BWL3 253 aa12.38□□□□□ -0.43
GGPS1-206ENST00000488594 UBR4Q5T4S7 5183 aa12.37□□□□□ -0.43
GGPS1-206ENST00000488594 ARMS2P0C7Q2 107 aa12.36□□□□□ -0.43
GGPS1-206ENST00000488594 RPL36AP83881 106 aaKnown RBP12.36□□□□□ -0.43
GGPS1-206ENST00000488594 RPL36ALQ969Q0 106 aaKnown RBP12.36□□□□□ -0.43
GGPS1-206ENST00000488594 SFRP2Q96HF1 295 aa12.36□□□□□ -0.43
GGPS1-206ENST00000488594 ACTR3CQ9C0K3 210 aaPredicted RBP12.36□□□□□ -0.43
GGPS1-206ENST00000488594 TRAV34A0A0B4J273 112 aa12.35□□□□□ -0.43
GGPS1-206ENST00000488594 KRBOX1C9JBD0 128 aa12.35□□□□□ -0.43
GGPS1-206ENST00000488594 PHLDA3Q9Y5J5 127 aa12.35□□□□□ -0.43
GGPS1-206ENST00000488594 TRBV7-3A0A075B6L6 115 aa12.34□□□□□ -0.43
GGPS1-206ENST00000488594 A0A087WWL8 130 aa12.34□□□□□ -0.43
GGPS1-206ENST00000488594 IFNA7P01567 189 aa12.34□□□□□ -0.43
GGPS1-206ENST00000488594 CRPP02741 224 aa12.34□□□□□ -0.43
GGPS1-206ENST00000488594 ATP6V0CP27449 155 aa12.34□□□□□ -0.43
GGPS1-206ENST00000488594 IFITM3Q01628 133 aa12.34□□□□□ -0.43
GGPS1-206ENST00000488594 TNFSF18Q9UNG2 199 aa12.34□□□□□ -0.43
GGPS1-206ENST00000488594 TMEM262E9PQX1 116 aa12.33□□□□□ -0.44
GGPS1-206ENST00000488594 UBE2D3P61077 147 aa12.33□□□□□ -0.44
GGPS1-206ENST00000488594 UBE2D2P62837 147 aa12.33□□□□□ -0.44
GGPS1-206ENST00000488594 Q86TA4 180 aa12.33□□□□□ -0.44
GGPS1-206ENST00000488594 M0R036 132 aa12.32□□□□□ -0.44
GGPS1-206ENST00000488594 PEX7O00628 323 aa12.32□□□□□ -0.44
GGPS1-206ENST00000488594 TPT1P13693 172 aaKnown RBP12.32□□□□□ -0.44
GGPS1-206ENST00000488594 ENHOQ6UWT2 76 aa12.32□□□□□ -0.44
GGPS1-206ENST00000488594 COX8CQ7Z4L0 72 aa12.32□□□□□ -0.44
GGPS1-206ENST00000488594 HIST1H2BAQ96A08 127 aa12.32□□□□□ -0.44
GGPS1-206ENST00000488594 NKX6-2Q9C056 277 aaPredicted RBP12.32□□□□□ -0.44
GGPS1-206ENST00000488594 ZFP30Q9Y2G7 519 aa12.32□□□□□ -0.44
GGPS1-206ENST00000488594 TRBV6-8A0A0A6YYG3 113 aa12.31□□□□□ -0.44
GGPS1-206ENST00000488594 M0R381 172 aa12.31□□□□□ -0.44
GGPS1-206ENST00000488594 CRIP1P50238 77 aa12.31□□□□□ -0.44
GGPS1-206ENST00000488594 FAM162BQ5T6X4 162 aa12.31□□□□□ -0.44
GGPS1-206ENST00000488594 DGAT2L7PQ6IED9 249 aa12.31□□□□□ -0.44
GGPS1-206ENST00000488594 ZFP82Q8N141 532 aa12.31□□□□□ -0.44
GGPS1-206ENST00000488594 AQP10Q96PS8 301 aa12.31□□□□□ -0.44
GGPS1-206ENST00000488594 GRIFINA4D1Z8 144 aa12.3□□□□□ -0.44
GGPS1-206ENST00000488594 USP17L23D6RBM5 183 aa12.3□□□□□ -0.44
GGPS1-206ENST00000488594 SH2D1AO60880 128 aa12.3□□□□□ -0.44
GGPS1-206ENST00000488594 DEFA1P59665 94 aa12.3□□□□□ -0.44
GGPS1-206ENST00000488594 DEFA3P59666 94 aa12.3□□□□□ -0.44
GGPS1-206ENST00000488594 PKIAP61925 76 aa12.3□□□□□ -0.44
GGPS1-206ENST00000488594 C15orf54Q8N8G6 183 aa12.3□□□□□ -0.44
GGPS1-206ENST00000488594 OR10G8Q8NGN5 311 aa12.3□□□□□ -0.44
GGPS1-206ENST00000488594 DAZAP1Q96EP5 407 aaKnown RBP12.3□□□□□ -0.44
GGPS1-206ENST00000488594 ZC2HC1AQ96GY0 325 aa12.3□□□□□ -0.44
GGPS1-206ENST00000488594 FAT3Q8TDW7 4589 aa12.3□□□□□ -0.44
GGPS1-206ENST00000488594 ANGP03950 147 aaKnown RBP12.29□□□□□ -0.44
GGPS1-206ENST00000488594 HNRNPA3P51991 378 aaKnown RBP12.29□□□□□ -0.44
GGPS1-206ENST00000488594 MIAQ16674 131 aa12.29□□□□□ -0.44
GGPS1-206ENST00000488594 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.29□□□□□ -0.44
GGPS1-206ENST00000488594 HLA-DQA1P01909 254 aa12.28□□□□□ -0.44
GGPS1-206ENST00000488594 UBE2G2P60604 165 aa12.28□□□□□ -0.44
GGPS1-206ENST00000488594 LINC01559Q495D7 138 aa12.28□□□□□ -0.44
GGPS1-206ENST00000488594 MPV17L2Q567V2 206 aa12.28□□□□□ -0.44
GGPS1-206ENST00000488594 C9orf163Q8N9P6 203 aa12.28□□□□□ -0.44
GGPS1-206ENST00000488594 PRSS1P07477 247 aa12.27□□□□□ -0.45
GGPS1-206ENST00000488594 RAB4BP61018 213 aa12.27□□□□□ -0.45
GGPS1-206ENST00000488594 ZNF674Q2M3X9 581 aa12.27□□□□□ -0.45
GGPS1-206ENST00000488594 FMC1Q96HJ9 113 aa12.27□□□□□ -0.45
GGPS1-206ENST00000488594 CTXND1A0A1B0GTU2 59 aa12.26□□□□□ -0.45
GGPS1-206ENST00000488594 FAM74A7A6NL05 159 aa12.26□□□□□ -0.45
GGPS1-206ENST00000488594 TMSB15BA0A087X1C1 80 aa12.25□□□□□ -0.45
GGPS1-206ENST00000488594 PTTG1O95997 202 aa12.25□□□□□ -0.45
GGPS1-206ENST00000488594 UBE2G1P62253 170 aa12.25□□□□□ -0.45
GGPS1-206ENST00000488594 RPL19P84098 196 aaKnown RBP12.25□□□□□ -0.45
GGPS1-206ENST00000488594 ZNF726P1Q15940 193 aa12.25□□□□□ -0.45
GGPS1-206ENST00000488594 Q6ZRU5 148 aa12.25□□□□□ -0.45
GGPS1-206ENST00000488594 CHCHD5Q9BSY4 110 aa12.25□□□□□ -0.45
GGPS1-206ENST00000488594 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.25□□□□□ -0.45
GGPS1-206ENST00000488594 A0A0D9SG52 128 aa12.24□□□□□ -0.45
GGPS1-206ENST00000488594 TRBV6-1A0A0K0K1D8 114 aa12.24□□□□□ -0.45
GGPS1-206ENST00000488594 TMEM97Q5BJF2 176 aa12.24□□□□□ -0.45
GGPS1-206ENST00000488594 PRR27Q6MZM9 219 aa12.24□□□□□ -0.45
GGPS1-206ENST00000488594 NEXN-AS1Q8NBZ9 246 aa12.24□□□□□ -0.45
GGPS1-206ENST00000488594 TCEAL7Q9BRU2 100 aa12.24□□□□□ -0.45
GGPS1-206ENST00000488594 MT1HL1P0DM35 61 aa12.23□□□□□ -0.45
GGPS1-206ENST00000488594 ZNF56Q15929 161 aa12.23□□□□□ -0.45
GGPS1-206ENST00000488594 CLRN3Q8NCR9 226 aa12.23□□□□□ -0.45
GGPS1-206ENST00000488594 PRR34Q9NV39 138 aa12.23□□□□□ -0.45
GGPS1-206ENST00000488594 BORCS7-ASMTA0A0B4J1R7 106 aa12.22□□□□□ -0.45
GGPS1-206ENST00000488594 LTAP01374 205 aa12.22□□□□□ -0.45
GGPS1-206ENST00000488594 SDIM1Q6ZPB5 146 aa12.22□□□□□ -0.45
GGPS1-206ENST00000488594 RPL7L1Q6DKI1 246 aaKnown RBP12.21□□□□□ -0.45
GGPS1-206ENST00000488594 INO80EQ8NBZ0 244 aaPredicted RBP12.21□□□□□ -0.45
GGPS1-206ENST00000488594 A6NHS1 94 aa12.2□□□□□ -0.46
GGPS1-206ENST00000488594 ALG5Q9Y673 324 aa12.2□□□□□ -0.46
GGPS1-206ENST00000488594 PANO1I0J062 215 aa12.19□□□□□ -0.46
GGPS1-206ENST00000488594 FHITP49789 147 aa12.19□□□□□ -0.46
GGPS1-206ENST00000488594 RBX1P62877 108 aa12.19□□□□□ -0.46
GGPS1-206ENST00000488594 CIRBPQ14011 172 aaKnown RBP12.19□□□□□ -0.46
GGPS1-206ENST00000488594 AKR1C8PQ5T2L2 129 aa12.19□□□□□ -0.46
GGPS1-206ENST00000488594 KRTAP26-1Q6PEX3 210 aa12.19□□□□□ -0.46
GGPS1-206ENST00000488594 ZNF471Q9BX82 626 aaPredicted RBP12.19□□□□□ -0.46
GGPS1-206ENST00000488594 CXCL1P09341 107 aa12.18□□□□□ -0.46
GGPS1-206ENST00000488594 CNBPP62633 177 aaKnown RBP12.18□□□□□ -0.46
GGPS1-206ENST00000488594 LINC00269Q8N2A0 174 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms