RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 ORAOV1Q8WV07 137 aa9.33□□□□□ -0.92
NELFE-209ENST00000488426 TMEM18Q96B42 140 aa9.33□□□□□ -0.92
NELFE-209ENST00000488426 MSRB1Q9NZV6 116 aa9.33□□□□□ -0.92
NELFE-209ENST00000488426 PHLDA3Q9Y5J5 127 aa9.33□□□□□ -0.92
NELFE-209ENST00000488426 K7EIL1 84 aa9.32□□□□□ -0.92
NELFE-209ENST00000488426 FXYD7P58549 80 aa9.32□□□□□ -0.92
NELFE-209ENST00000488426 AMN1Q8IY45 258 aa9.32□□□□□ -0.92
NELFE-209ENST00000488426 TMEM256Q8N2U0 113 aa9.32□□□□□ -0.92
NELFE-209ENST00000488426 MCRIP2Q9BUT9 160 aaKnown RBP9.32□□□□□ -0.92
NELFE-209ENST00000488426 TRGV11A0A075B6L2 103 aa9.32□□□□□ -0.92
NELFE-209ENST00000488426 SERF1AO75920 110 aa9.32□□□□□ -0.92
NELFE-209ENST00000488426 NXPH4O95158 308 aa9.32□□□□□ -0.92
NELFE-209ENST00000488426 INSP01308 110 aa9.32□□□□□ -0.92
NELFE-209ENST00000488426 MRAPQ8TCY5 172 aa9.32□□□□□ -0.92
NELFE-209ENST00000488426 C19orf73Q9NVV2 129 aa9.32□□□□□ -0.92
NELFE-209ENST00000488426 TIMM8BQ9Y5J9 83 aaPredicted RBP9.32□□□□□ -0.92
NELFE-209ENST00000488426 U3KQK5 164 aa9.32□□□□□ -0.92
NELFE-209ENST00000488426 IGHV3-16A0A0C4DH30 117 aa9.31□□□□□ -0.92
NELFE-209ENST00000488426 CCL25O15444 150 aa9.31□□□□□ -0.92
NELFE-209ENST00000488426 LINC00310P59036 64 aa9.31□□□□□ -0.92
NELFE-209ENST00000488426 LINC00467Q9BRT7 94 aa9.31□□□□□ -0.92
NELFE-209ENST00000488426 C20orf202A1L168 122 aa9.3□□□□□ -0.92
NELFE-209ENST00000488426 RBMY1A1P0DJD3 496 aaKnown RBP9.3□□□□□ -0.92
NELFE-209ENST00000488426 RBMY1CP0DJD4 496 aa9.3□□□□□ -0.92
NELFE-209ENST00000488426 RBMY1FQ15415 496 aaKnown RBP9.3□□□□□ -0.92
NELFE-209ENST00000488426 MRPL51Q4U2R6 128 aaKnown RBP9.3□□□□□ -0.92
NELFE-209ENST00000488426 ORMDL3Q8N138 153 aa9.3□□□□□ -0.92
NELFE-209ENST00000488426 Q8N1Y9 231 aa9.3□□□□□ -0.92
NELFE-209ENST00000488426 C9orf85Q96MD7 179 aa9.3□□□□□ -0.92
NELFE-209ENST00000488426 M0R381 172 aa9.3□□□□□ -0.92
NELFE-209ENST00000488426 ZNF705AQ6ZN79 300 aaPredicted RBP9.3□□□□□ -0.92
NELFE-209ENST00000488426 RNF185Q96GF1 192 aa9.3□□□□□ -0.92
NELFE-209ENST00000488426 TMEM238C9JI98 176 aa9.29□□□□□ -0.92
NELFE-209ENST00000488426 D6R8Y8 96 aa9.29□□□□□ -0.92
NELFE-209ENST00000488426 NUPR1O60356 82 aa9.29□□□□□ -0.92
NELFE-209ENST00000488426 EVI2AP22794 236 aa9.29□□□□□ -0.92
NELFE-209ENST00000488426 EGFEM1PQ0D2K5 195 aa9.29□□□□□ -0.92
NELFE-209ENST00000488426 TEX43Q6ZNM6 134 aa9.29□□□□□ -0.92
NELFE-209ENST00000488426 AP1S3Q96PC3 154 aa9.29□□□□□ -0.92
NELFE-209ENST00000488426 RCHY1Q96PM5 261 aa9.29□□□□□ -0.92
NELFE-209ENST00000488426 CBY3A6NI87 242 aa9.28□□□□□ -0.92
NELFE-209ENST00000488426 CKS2P33552 79 aa9.28□□□□□ -0.92
NELFE-209ENST00000488426 GTSCR1Q86UQ5 136 aa9.28□□□□□ -0.92
NELFE-209ENST00000488426 PRELID3AQ96N28 172 aa9.28□□□□□ -0.92
NELFE-209ENST00000488426 LAMTOR2Q9Y2Q5 125 aa9.28□□□□□ -0.92
NELFE-209ENST00000488426 UBE2V1Q13404 147 aa9.28□□□□□ -0.92
NELFE-209ENST00000488426 SYT8Q8NBV8 401 aa9.28□□□□□ -0.92
NELFE-209ENST00000488426 CSTL1Q9H114 145 aa9.28□□□□□ -0.92
NELFE-209ENST00000488426 MDFICQ9P1T7 246 aa9.28□□□□□ -0.92
NELFE-209ENST00000488426 MORN3Q6PF18 240 aaPredicted RBP9.27□□□□□ -0.93
NELFE-209ENST00000488426 CHCHD1Q96BP2 118 aaKnown RBP9.27□□□□□ -0.93
NELFE-209ENST00000488426 WFDC10AQ9H1F0 79 aa9.27□□□□□ -0.93
NELFE-209ENST00000488426 DPH3P1Q9H4G8 78 aa9.27□□□□□ -0.93
NELFE-209ENST00000488426 XCL2Q9UBD3 114 aa9.27□□□□□ -0.93
NELFE-209ENST00000488426 MUC4Q99102 2169 aa9.26□□□□□ -0.93
NELFE-209ENST00000488426 DEFB121Q5J5C9 76 aa9.26□□□□□ -0.93
NELFE-209ENST00000488426 NIT1Q86X76 327 aa9.26□□□□□ -0.93
NELFE-209ENST00000488426 MRAP2Q96G30 205 aa9.26□□□□□ -0.93
NELFE-209ENST00000488426 LINC01587Q99440 93 aa9.26□□□□□ -0.93
NELFE-209ENST00000488426 C1QTNF4Q9BXJ3 329 aa9.26□□□□□ -0.93
NELFE-209ENST00000488426 SAMD10Q9BYL1 202 aa9.26□□□□□ -0.93
NELFE-209ENST00000488426 SPRY2O43597 315 aa9.25□□□□□ -0.93
NELFE-209ENST00000488426 ZNF415Q09FC8 603 aa9.25□□□□□ -0.93
NELFE-209ENST00000488426 RNASEKQ6P5S7 137 aaKnown RBP9.25□□□□□ -0.93
NELFE-209ENST00000488426 A6NJY4 79 aa9.25□□□□□ -0.93
NELFE-209ENST00000488426 HSBP1O75506 76 aa9.25□□□□□ -0.93
NELFE-209ENST00000488426 SCGB1D1O95968 90 aa9.25□□□□□ -0.93
NELFE-209ENST00000488426 URB1-AS1Q96HZ7 61 aa9.25□□□□□ -0.93
NELFE-209ENST00000488426 SMKR1H3BMG3 65 aa9.24□□□□□ -0.93
NELFE-209ENST00000488426 NCR2O95944 276 aa9.24□□□□□ -0.93
NELFE-209ENST00000488426 NPYP01303 97 aa9.24□□□□□ -0.93
NELFE-209ENST00000488426 SMIM17P0DL12 118 aa9.24□□□□□ -0.93
NELFE-209ENST00000488426 AMTP48728 403 aa9.24□□□□□ -0.93
NELFE-209ENST00000488426 PIK3CD-AS1Q5SR53 167 aa9.24□□□□□ -0.93
NELFE-209ENST00000488426 C1orf158Q8N1D5 194 aa9.24□□□□□ -0.93
NELFE-209ENST00000488426 C14orf178Q8N769 122 aaPredicted RBP9.24□□□□□ -0.93
NELFE-209ENST00000488426 POM121L12Q8N7R1 296 aa9.24□□□□□ -0.93
NELFE-209ENST00000488426 PTH2Q96A98 100 aa9.24□□□□□ -0.93
NELFE-209ENST00000488426 GIG44P09565 113 aaPredicted RBP9.23□□□□□ -0.93
NELFE-209ENST00000488426 HTN1P15515 57 aa9.23□□□□□ -0.93
NELFE-209ENST00000488426 RPL35AP18077 110 aaKnown RBP9.23□□□□□ -0.93
NELFE-209ENST00000488426 DEFB125Q8N687 156 aa9.23□□□□□ -0.93
NELFE-209ENST00000488426 MAP1LC3AQ9H492 121 aa9.23□□□□□ -0.93
NELFE-209ENST00000488426 KIF25-AS1Q9Y6Z4 181 aa9.23□□□□□ -0.93
NELFE-209ENST00000488426 HUWE1Q7Z6Z7 4374 aaKnown RBP9.23□□□□□ -0.93
NELFE-209ENST00000488426 PMCHP20382 165 aa9.23□□□□□ -0.93
NELFE-209ENST00000488426 C11orf72Q8NBR9 251 aa9.23□□□□□ -0.93
NELFE-209ENST00000488426 PRSS3P2Q8NHM4 247 aa9.23□□□□□ -0.93
NELFE-209ENST00000488426 SPXQ9BT56 116 aa9.23□□□□□ -0.93
NELFE-209ENST00000488426 TNFRSF6BO95407 300 aa9.22□□□□□ -0.93
NELFE-209ENST00000488426 ZNF876PQ49A33 203 aa9.22□□□□□ -0.93
NELFE-209ENST00000488426 FA2HQ7L5A8 372 aa9.22□□□□□ -0.93
NELFE-209ENST00000488426 AP5S1Q9NUS5 200 aa9.22□□□□□ -0.93
NELFE-209ENST00000488426 M0R2P5 195 aa9.21□□□□□ -0.93
NELFE-209ENST00000488426 MGPP08493 103 aa9.21□□□□□ -0.93
NELFE-209ENST00000488426 STPG4Q8N801 248 aa9.21□□□□□ -0.93
NELFE-209ENST00000488426 NRACQ8N912 160 aa9.21□□□□□ -0.93
NELFE-209ENST00000488426 PPP1R17O96001 155 aa9.21□□□□□ -0.94
NELFE-209ENST00000488426 IFI27P40305 119 aaPredicted RBP9.21□□□□□ -0.94
NELFE-209ENST00000488426 LINC00315P59091 139 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms