RNA–Protein interactions for RNA: ENST00000488384.1

ERGIC3-216, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 766 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-216ENST00000488384 MUC21A0A0G2JKD1 596 aa10.98□□□□□ -0.65
ERGIC3-216ENST00000488384 MUC21A0A140T8X8 626 aa10.98□□□□□ -0.65
ERGIC3-216ENST00000488384 CRYGDP07320 174 aa10.98□□□□□ -0.65
ERGIC3-216ENST00000488384 SRP19P09132 144 aaKnown RBP10.98□□□□□ -0.65
ERGIC3-216ENST00000488384 RPS20P60866 119 aaKnown RBP10.98□□□□□ -0.65
ERGIC3-216ENST00000488384 KRTAP1-5Q9BYS1 174 aa10.98□□□□□ -0.65
ERGIC3-216ENST00000488384 RTL8CO15255 209 aa10.97□□□□□ -0.65
ERGIC3-216ENST00000488384 LINC00694P0DN24 101 aa10.97□□□□□ -0.65
ERGIC3-216ENST00000488384 FER1L6-AS1Q8NA97 138 aa10.97□□□□□ -0.65
ERGIC3-216ENST00000488384 NUDT10Q8NFP7 164 aa10.97□□□□□ -0.65
ERGIC3-216ENST00000488384 NUDT11Q96G61 164 aa10.97□□□□□ -0.65
ERGIC3-216ENST00000488384 RNASE7Q9H1E1 156 aaKnown RBP10.97□□□□□ -0.65
ERGIC3-216ENST00000488384 SPANXN1Q5VSR9 72 aa10.96□□□□□ -0.65
ERGIC3-216ENST00000488384 SH2D6Q7Z4S9 175 aa10.96□□□□□ -0.65
ERGIC3-216ENST00000488384 C14orf178Q8N769 122 aaPredicted RBP10.96□□□□□ -0.65
ERGIC3-216ENST00000488384 SMIM7Q9BQ49 75 aa10.96□□□□□ -0.65
ERGIC3-216ENST00000488384 Q9UF83 564 aa10.96□□□□□ -0.65
ERGIC3-216ENST00000488384 ATP6V1G1O75348 118 aa10.95□□□□□ -0.66
ERGIC3-216ENST00000488384 TIRAPP58753 221 aa10.95□□□□□ -0.66
ERGIC3-216ENST00000488384 TPPP3Q9BW30 176 aa10.95□□□□□ -0.66
ERGIC3-216ENST00000488384 RPP21Q9H633 154 aaKnown RBP10.95□□□□□ -0.66
ERGIC3-216ENST00000488384 LY96Q9Y6Y9 160 aa10.95□□□□□ -0.66
ERGIC3-216ENST00000488384 XKRY2A2RUG3 117 aa10.94□□□□□ -0.66
ERGIC3-216ENST00000488384 C9JQL5 133 aa10.94□□□□□ -0.66
ERGIC3-216ENST00000488384 SIVA1O15304 175 aa10.94□□□□□ -0.66
ERGIC3-216ENST00000488384 SRSF3P84103 164 aaKnown RBP10.94□□□□□ -0.66
ERGIC3-216ENST00000488384 TTC32Q5I0X7 151 aa10.94□□□□□ -0.66
ERGIC3-216ENST00000488384 WFDC10BQ8IUB3 73 aa10.94□□□□□ -0.66
ERGIC3-216ENST00000488384 GAGE12JA6NER3 117 aa10.93□□□□□ -0.66
ERGIC3-216ENST00000488384 ZNF727A8MUV8 499 aa10.93□□□□□ -0.66
ERGIC3-216ENST00000488384 CTRLP40313 264 aa10.93□□□□□ -0.66
ERGIC3-216ENST00000488384 SSTP61278 116 aa10.93□□□□□ -0.66
ERGIC3-216ENST00000488384 GAGE1Q13065 139 aa10.93□□□□□ -0.66
ERGIC3-216ENST00000488384 GAGE4Q13068 117 aa10.93□□□□□ -0.66
ERGIC3-216ENST00000488384 GAGE5Q13069 117 aa10.93□□□□□ -0.66
ERGIC3-216ENST00000488384 GAGE13Q4V321 117 aa10.93□□□□□ -0.66
ERGIC3-216ENST00000488384 C1orf134Q5TEV5 83 aa10.93□□□□□ -0.66
ERGIC3-216ENST00000488384 LINC00336Q6ZUF6 198 aa10.93□□□□□ -0.66
ERGIC3-216ENST00000488384 AP1S3Q96PC3 154 aa10.93□□□□□ -0.66
ERGIC3-216ENST00000488384 A0A1W2PPQ1 181 aa10.92□□□□□ -0.66
ERGIC3-216ENST00000488384 NDUFA5Q16718 116 aa10.92□□□□□ -0.66
ERGIC3-216ENST00000488384 LYZL1Q6UWQ5 148 aa10.92□□□□□ -0.66
ERGIC3-216ENST00000488384 FAM231DQ6ZW35 169 aa10.92□□□□□ -0.66
ERGIC3-216ENST00000488384 LINC01551Q86U37 167 aa10.92□□□□□ -0.66
ERGIC3-216ENST00000488384 C6orf223Q8N319 242 aa10.92□□□□□ -0.66
ERGIC3-216ENST00000488384 KIF25-AS1Q9Y6Z4 181 aa10.92□□□□□ -0.66
ERGIC3-216ENST00000488384 DNAH11Q96DT5 4516 aa10.92□□□□□ -0.66
ERGIC3-216ENST00000488384 KIAA1109Q2LD37 5005 aa10.92□□□□□ -0.66
ERGIC3-216ENST00000488384 PKD1P98161 4303 aa10.91□□□□□ -0.66
ERGIC3-216ENST00000488384 CACNG7P62955 275 aa10.91□□□□□ -0.66
ERGIC3-216ENST00000488384 ZNF56Q15929 161 aa10.91□□□□□ -0.66
ERGIC3-216ENST00000488384 SOHLH1Q5JUK2 328 aa10.91□□□□□ -0.66
ERGIC3-216ENST00000488384 ATP6V0E2Q8NHE4 81 aa10.91□□□□□ -0.66
ERGIC3-216ENST00000488384 KRTAP17-1Q9BYP8 105 aa10.91□□□□□ -0.66
ERGIC3-216ENST00000488384 MSRB1Q9NZV6 116 aa10.91□□□□□ -0.66
ERGIC3-216ENST00000488384 DYNC1H1Q14204 4646 aaKnown RBP10.9□□□□□ -0.66
ERGIC3-216ENST00000488384 TRBV10-1A0A0K0K1A3 114 aa10.9□□□□□ -0.66
ERGIC3-216ENST00000488384 F2Z2F3 143 aa10.9□□□□□ -0.66
ERGIC3-216ENST00000488384 LINC00315P59091 139 aa10.9□□□□□ -0.66
ERGIC3-216ENST00000488384 RAB4BP61018 213 aa10.9□□□□□ -0.66
ERGIC3-216ENST00000488384 GTSF1Q8WW33 167 aa10.9□□□□□ -0.66
ERGIC3-216ENST00000488384 CNFNQ9BYD5 112 aa10.9□□□□□ -0.66
ERGIC3-216ENST00000488384 GTSF1LQ9H1H1 148 aa10.9□□□□□ -0.66
ERGIC3-216ENST00000488384 PKHD1P08F94 4074 aa10.9□□□□□ -0.66
ERGIC3-216ENST00000488384 PRSS29PA6NIE9 313 aa10.89□□□□□ -0.67
ERGIC3-216ENST00000488384 GATCO43716 136 aaKnown RBP10.89□□□□□ -0.67
ERGIC3-216ENST00000488384 DNAH10OSP0CZ25 163 aa10.89□□□□□ -0.67
ERGIC3-216ENST00000488384 ERVFC1-1P60608 527 aa10.89□□□□□ -0.67
ERGIC3-216ENST00000488384 PEA15Q15121 130 aa10.89□□□□□ -0.67
ERGIC3-216ENST00000488384 A0A1B0GVY2 172 aa10.88□□□□□ -0.67
ERGIC3-216ENST00000488384 SMIM17P0DL12 118 aa10.88□□□□□ -0.67
ERGIC3-216ENST00000488384 FAM74A3Q4VXF1 159 aa10.88□□□□□ -0.67
ERGIC3-216ENST00000488384 CT83Q5H943 113 aa10.88□□□□□ -0.67
ERGIC3-216ENST00000488384 LELP1Q5T871 98 aa10.88□□□□□ -0.67
ERGIC3-216ENST00000488384 OR10G8Q8NGN5 311 aa10.88□□□□□ -0.67
ERGIC3-216ENST00000488384 SMDT1Q9H4I9 107 aa10.88□□□□□ -0.67
ERGIC3-216ENST00000488384 NTF3P20783 257 aa10.87□□□□□ -0.67
ERGIC3-216ENST00000488384 OR10J3Q5JRS4 329 aa10.87□□□□□ -0.67
ERGIC3-216ENST00000488384 WDR73Q6P4I2 378 aa10.87□□□□□ -0.67
ERGIC3-216ENST00000488384 NEXN-AS1Q8NBZ9 246 aa10.87□□□□□ -0.67
ERGIC3-216ENST00000488384 TRAV8-6A0A0B4J262 113 aa10.86□□□□□ -0.67
ERGIC3-216ENST00000488384 A8MWL6 223 aa10.86□□□□□ -0.67
ERGIC3-216ENST00000488384 F5H697 171 aa10.86□□□□□ -0.67
ERGIC3-216ENST00000488384 EVI2AP22794 236 aa10.86□□□□□ -0.67
ERGIC3-216ENST00000488384 S100A1P23297 94 aa10.86□□□□□ -0.67
ERGIC3-216ENST00000488384 UBE2D3P61077 147 aa10.86□□□□□ -0.67
ERGIC3-216ENST00000488384 RPL23P62829 140 aaKnown RBP10.86□□□□□ -0.67
ERGIC3-216ENST00000488384 UBE2D2P62837 147 aa10.86□□□□□ -0.67
ERGIC3-216ENST00000488384 RPL36AP83881 106 aaKnown RBP10.86□□□□□ -0.67
ERGIC3-216ENST00000488384 TMEM241Q24JQ0 296 aa10.86□□□□□ -0.67
ERGIC3-216ENST00000488384 RPL36ALQ969Q0 106 aaKnown RBP10.86□□□□□ -0.67
ERGIC3-216ENST00000488384 ISOC2Q96AB3 205 aa10.86□□□□□ -0.67
ERGIC3-216ENST00000488384 OSTCQ9NRP0 149 aa10.86□□□□□ -0.67
ERGIC3-216ENST00000488384 NAT8Q9UHE5 227 aa10.86□□□□□ -0.67
ERGIC3-216ENST00000488384 TRBV7-3A0A075B6L6 115 aa10.85□□□□□ -0.67
ERGIC3-216ENST00000488384 IGHV3-38A0A0C4DH36 116 aa10.85□□□□□ -0.67
ERGIC3-216ENST00000488384 MGPP08493 103 aa10.85□□□□□ -0.67
ERGIC3-216ENST00000488384 TRGC1P0CF51 173 aa10.85□□□□□ -0.67
ERGIC3-216ENST00000488384 BTF3P20290 206 aaKnown RBP10.85□□□□□ -0.67
ERGIC3-216ENST00000488384 RAB14P61106 215 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms