RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 ZC2HC1AQ96GY0 325 aa7.6□□□□□ -1.19
NIPAL3-207ENST00000488155 EIF5A2Q9GZV4 153 aaKnown RBP7.6□□□□□ -1.19
NIPAL3-207ENST00000488155 PARLQ9H300 379 aa7.6□□□□□ -1.19
NIPAL3-207ENST00000488155 MED9Q9NWA0 146 aa7.6□□□□□ -1.19
NIPAL3-207ENST00000488155 GNG13Q9P2W3 67 aa7.6□□□□□ -1.19
NIPAL3-207ENST00000488155 Q9UF83 564 aa7.6□□□□□ -1.19
NIPAL3-207ENST00000488155 K7EP13 123 aa7.59□□□□□ -1.19
NIPAL3-207ENST00000488155 CIDEAO60543 219 aa7.59□□□□□ -1.19
NIPAL3-207ENST00000488155 SH2D1AO60880 128 aa7.59□□□□□ -1.19
NIPAL3-207ENST00000488155 MGST1P10620 155 aaKnown RBP7.59□□□□□ -1.19
NIPAL3-207ENST00000488155 PEA15Q15121 130 aa7.59□□□□□ -1.19
NIPAL3-207ENST00000488155 LINC01556Q5JQF7 62 aa7.59□□□□□ -1.19
NIPAL3-207ENST00000488155 LELP1Q5T871 98 aa7.59□□□□□ -1.19
NIPAL3-207ENST00000488155 DMRTA1Q5VZB9 504 aa7.59□□□□□ -1.19
NIPAL3-207ENST00000488155 CFAP161Q6P656 301 aa7.59□□□□□ -1.19
NIPAL3-207ENST00000488155 Q8N3U1 123 aa7.59□□□□□ -1.19
NIPAL3-207ENST00000488155 C14orf178Q8N769 122 aaPredicted RBP7.59□□□□□ -1.19
NIPAL3-207ENST00000488155 HIST1H2BAQ96A08 127 aa7.59□□□□□ -1.19
NIPAL3-207ENST00000488155 PTH2Q96A98 100 aa7.59□□□□□ -1.19
NIPAL3-207ENST00000488155 GTSF1LQ9H1H1 148 aa7.59□□□□□ -1.19
NIPAL3-207ENST00000488155 FAT1Q14517 4588 aa7.58□□□□□ -1.2
NIPAL3-207ENST00000488155 RAB19A4D1S5 217 aa7.58□□□□□ -1.2
NIPAL3-207ENST00000488155 RBFOX3A6NFN3 312 aa7.58□□□□□ -1.2
NIPAL3-207ENST00000488155 A8MWV9 139 aa7.58□□□□□ -1.2
NIPAL3-207ENST00000488155 IBA57-AS1B1ANH7 110 aa7.58□□□□□ -1.2
NIPAL3-207ENST00000488155 ARMS2P0C7Q2 107 aa7.58□□□□□ -1.2
NIPAL3-207ENST00000488155 XGP55808 180 aa7.58□□□□□ -1.2
NIPAL3-207ENST00000488155 UBE2G1P62253 170 aa7.58□□□□□ -1.2
NIPAL3-207ENST00000488155 HAMPP81172 84 aa7.58□□□□□ -1.2
NIPAL3-207ENST00000488155 FAM74A4Q5TZK3 123 aa7.58□□□□□ -1.2
NIPAL3-207ENST00000488155 CDPF1Q6NVV7 123 aa7.58□□□□□ -1.2
NIPAL3-207ENST00000488155 NKX6-2Q9C056 277 aaPredicted RBP7.58□□□□□ -1.2
NIPAL3-207ENST00000488155 IL36BQ9NZH7 164 aa7.58□□□□□ -1.2
NIPAL3-207ENST00000488155 A0A087WWL8 130 aa7.57□□□□□ -1.2
NIPAL3-207ENST00000488155 KRBOX1C9JBD0 128 aa7.57□□□□□ -1.2
NIPAL3-207ENST00000488155 M0R381 172 aa7.57□□□□□ -1.2
NIPAL3-207ENST00000488155 PAGE4O60829 102 aa7.57□□□□□ -1.2
NIPAL3-207ENST00000488155 TAGLN2P37802 199 aaKnown RBP7.57□□□□□ -1.2
NIPAL3-207ENST00000488155 AKR1C3P42330 323 aa7.57□□□□□ -1.2
NIPAL3-207ENST00000488155 TOR2AQ5JU69 321 aa7.57□□□□□ -1.2
NIPAL3-207ENST00000488155 FAM162BQ5T6X4 162 aa7.57□□□□□ -1.2
NIPAL3-207ENST00000488155 MANBALQ9NQG1 85 aa7.57□□□□□ -1.2
NIPAL3-207ENST00000488155 ZFP30Q9Y2G7 519 aa7.57□□□□□ -1.2
NIPAL3-207ENST00000488155 LRCOL1A6NCL2 159 aa7.56□□□□□ -1.2
NIPAL3-207ENST00000488155 EPM2AB3EWF7 344 aa7.56□□□□□ -1.2
NIPAL3-207ENST00000488155 GCSHP23434 173 aa7.56□□□□□ -1.2
NIPAL3-207ENST00000488155 UQCC3Q6UW78 93 aa7.56□□□□□ -1.2
NIPAL3-207ENST00000488155 ZFP2Q6ZN57 461 aa7.56□□□□□ -1.2
NIPAL3-207ENST00000488155 SYT8Q8NBV8 401 aa7.56□□□□□ -1.2
NIPAL3-207ENST00000488155 FMC1Q96HJ9 113 aa7.56□□□□□ -1.2
NIPAL3-207ENST00000488155 VAX2Q9UIW0 290 aa7.56□□□□□ -1.2
NIPAL3-207ENST00000488155 PHLDA3Q9Y5J5 127 aa7.56□□□□□ -1.2
NIPAL3-207ENST00000488155 FLG2Q5D862 2391 aaPredicted RBP7.56□□□□□ -1.2
NIPAL3-207ENST00000488155 DNAH8Q96JB1 4490 aa7.56□□□□□ -1.2
NIPAL3-207ENST00000488155 IGLV5-52A0A0A0MRZ9 124 aa7.55□□□□□ -1.2
NIPAL3-207ENST00000488155 SMR3BP02814 79 aaPredicted RBP7.55□□□□□ -1.2
NIPAL3-207ENST00000488155 BCL2P10415 239 aa7.55□□□□□ -1.2
NIPAL3-207ENST00000488155 RPL19P84098 196 aaKnown RBP7.55□□□□□ -1.2
NIPAL3-207ENST00000488155 ZNF674Q2M3X9 581 aa7.55□□□□□ -1.2
NIPAL3-207ENST00000488155 UFSP1Q6NVU6 142 aa7.55□□□□□ -1.2
NIPAL3-207ENST00000488155 DAZ4Q86SG3 579 aaKnown RBP7.55□□□□□ -1.2
NIPAL3-207ENST00000488155 SMDT1Q9H4I9 107 aa7.55□□□□□ -1.2
NIPAL3-207ENST00000488155 DAZ3Q9NR90 486 aaKnown RBP7.55□□□□□ -1.2
NIPAL3-207ENST00000488155 SCO2A0A1W2PP80 73 aa7.54□□□□□ -1.2
NIPAL3-207ENST00000488155 LTAP01374 205 aa7.54□□□□□ -1.2
NIPAL3-207ENST00000488155 LINC00694P0DN24 101 aa7.54□□□□□ -1.2
NIPAL3-207ENST00000488155 SRSF3P84103 164 aaKnown RBP7.54□□□□□ -1.2
NIPAL3-207ENST00000488155 LINC01559Q495D7 138 aa7.54□□□□□ -1.2
NIPAL3-207ENST00000488155 PIK3CD-AS1Q5SR53 167 aa7.54□□□□□ -1.2
NIPAL3-207ENST00000488155 MUC21A0A0G2JKD1 596 aa7.53□□□□□ -1.2
NIPAL3-207ENST00000488155 MUC21A0A140T8X8 626 aa7.53□□□□□ -1.2
NIPAL3-207ENST00000488155 RHODO00212 210 aa7.53□□□□□ -1.2
NIPAL3-207ENST00000488155 LECT2O14960 151 aa7.53□□□□□ -1.2
NIPAL3-207ENST00000488155 CEBPGP53567 150 aa7.53□□□□□ -1.2
NIPAL3-207ENST00000488155 SSTP61278 116 aa7.53□□□□□ -1.2
NIPAL3-207ENST00000488155 WFDC2Q14508 124 aa7.53□□□□□ -1.2
NIPAL3-207ENST00000488155 DNLZQ5SXM8 178 aa7.53□□□□□ -1.2
NIPAL3-207ENST00000488155 Q8N814 137 aa7.53□□□□□ -1.2
NIPAL3-207ENST00000488155 SFRP2Q96HF1 295 aa7.53□□□□□ -1.2
NIPAL3-207ENST00000488155 VPS13BQ7Z7G8 4022 aa7.52□□□□□ -1.21
NIPAL3-207ENST00000488155 TRBV6-1A0A0K0K1D8 114 aa7.52□□□□□ -1.21
NIPAL3-207ENST00000488155 ATP6V1G1O75348 118 aa7.52□□□□□ -1.21
NIPAL3-207ENST00000488155 SRP19P09132 144 aaKnown RBP7.52□□□□□ -1.21
NIPAL3-207ENST00000488155 MEF2BQ02080 365 aaPredicted RBP7.52□□□□□ -1.21
NIPAL3-207ENST00000488155 Q5VSD8 79 aa7.52□□□□□ -1.21
NIPAL3-207ENST00000488155 PRR27Q6MZM9 219 aa7.52□□□□□ -1.21
NIPAL3-207ENST00000488155 COX8CQ7Z4L0 72 aa7.52□□□□□ -1.21
NIPAL3-207ENST00000488155 BAGE2Q86Y30 109 aa7.52□□□□□ -1.21
NIPAL3-207ENST00000488155 ZFP82Q8N141 532 aa7.52□□□□□ -1.21
NIPAL3-207ENST00000488155 DNAJC30Q96LL9 226 aa7.52□□□□□ -1.21
NIPAL3-207ENST00000488155 TMEM218A2RU14 115 aa7.51□□□□□ -1.21
NIPAL3-207ENST00000488155 PDE6DO43924 150 aa7.51□□□□□ -1.21
NIPAL3-207ENST00000488155 LAGE3Q14657 143 aa7.51□□□□□ -1.21
NIPAL3-207ENST00000488155 FRZBQ92765 325 aa7.51□□□□□ -1.21
NIPAL3-207ENST00000488155 TCEAL7Q9BRU2 100 aa7.51□□□□□ -1.21
NIPAL3-207ENST00000488155 TM2D2Q9BX73 214 aa7.51□□□□□ -1.21
NIPAL3-207ENST00000488155 URGCP-MRPS24S4R325 110 aa7.51□□□□□ -1.21
NIPAL3-207ENST00000488155 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.5□□□□□ -1.21
NIPAL3-207ENST00000488155 A0A087WWC5 75 aa7.5□□□□□ -1.21
NIPAL3-207ENST00000488155 C9JQL5 133 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms