RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 HERC1Q15751 4861 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 PRDM2Q13029 1718 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 BCORL1Q5H9F3 1711 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 STAB1Q9NY15 2570 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 DNAH10Q8IVF4 4471 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 TRBV19A0A075B6N1 114 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 TRBV25-1A0A075B6N4 114 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 TRAV9-1A0A075B6T8 112 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 hCG_1818297A0A087WSY0 165 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 A0A087WTM6 91 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 TRGV10A0A0A0MS01 117 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 TRAV3A0A0B4J244 114 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 TRAV5A0A0B4J249 113 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 TRAV12-3A0A0B4J271 114 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 TRAV17A0A0B4J275 112 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 TRBV10-1A0A0K0K1A3 114 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 SPTY2D1-AS1A0A0U1RR47 76 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 MMP24-AS1A0A0U1RRL7 71 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 LOC100130705A0A1B0GUX0 176 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 SMIM31A0A1B0GVY4 71 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 TRBV6-4A0A1B0GX49 114 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 A0A1W2PRE2 83 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 SMIM27A0A1W2PRY6 76 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 hDV103S1A0JD37 113 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 TLCD2A6NGC4 264 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 SMIM9A6NGZ8 99 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 LINC01549A6NIU2 74 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 FAM223BA6NKX1 122 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 OOSP1A8MZH6 123 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 C1orf196B1AJZ1 125 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 TMEM238C9JI98 176 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 ZNF670-ZNF695F2Z2N8 137 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 H3BMG7 143 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 H3BRM9 83 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 H3BUA1 57 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 H3BUX3 64 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 J3KT08 172 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 M0QZK8 103 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 M0R135 149 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 AIPO00170 330 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 CORTO00230 105 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 PGRMC1O00264 195 aaKnown RBP-0.06□□□□□ -2.42
SMC4-219ENST00000487747 HMGN4O00479 90 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 CCL22O00626 93 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 TAX1BP3O14907 124 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 CCL16O15467 120 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 MFSD11O43934 449 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 HIST1H2BKO60814 126 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 DCTN3O75935 186 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 ATP5HO75947 161 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 ATG12O94817 140 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 RPP14O95059 124 aaKnown RBP-0.06□□□□□ -2.42
SMC4-219ENST00000487747 NDUFB6O95139 128 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 TNFSF15O95150 251 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 GADD45GO95257 159 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 SERPINA1P01009 418 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 PPYP01298 95 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 IFNA17P01571 189 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 IGLV1-51P01701 117 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 GYPAP02724 150 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 TTRP02766 147 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 PRM1P04553 51 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 HMGN1P05114 100 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 HIST1H2BJP06899 126 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 CST2P09228 141 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 MPC1LP0DKB6 136 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 MGST1P10620 155 aaKnown RBP-0.06□□□□□ -2.42
SMC4-219ENST00000487747 SCGB1A1P11684 91 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 HIST1H1DP16402 221 aaKnown RBP-0.06□□□□□ -2.42
SMC4-219ENST00000487747 PDE6GP18545 87 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 OGNP20774 298 aaKnown RBP-0.06□□□□□ -2.42
SMC4-219ENST00000487747 HSD11B1P28845 292 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 SDC4P31431 198 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 S100A11P31949 105 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 S100A5P33763 92 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 GLRXP35754 106 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 SNCAP37840 140 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 AKR1D1P51857 326 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 CEBPGP53567 150 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 ARPP19P56211 112 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 CAV3P56539 151 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 TCTAP57738 103 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 AP3S2P59780 193 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 ROMO1P60602 79 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 NCALDP61601 193 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 HSPE1P61604 102 aaKnown RBP-0.06□□□□□ -2.42
SMC4-219ENST00000487747 RPL37P61927 97 aaKnown RBP-0.06□□□□□ -2.42
SMC4-219ENST00000487747 RHOBP62745 196 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 RANP62826 216 aaKnown RBP-0.06□□□□□ -2.42
SMC4-219ENST00000487747 S100A12P80511 92 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 MRPS10P82664 201 aaKnown RBP-0.06□□□□□ -2.42
SMC4-219ENST00000487747 RPL19P84098 196 aaKnown RBP-0.06□□□□□ -2.42
SMC4-219ENST00000487747 SERF2P84101 59 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 DR1Q01658 176 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 COX6A2Q02221 97 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 HIST1H1AQ02539 215 aaPredicted RBP-0.06□□□□□ -2.42
SMC4-219ENST00000487747 WT1-ASQ06250 92 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 AESQ08117 197 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 OR2F1Q13607 317 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 COX17Q14061 63 aa-0.06□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms