RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 CYTL1Q9NRR1 136 aa8.11□□□□□ -1.11
VPS16-208ENST00000487461 ARL2-SNX15V9GYD0 113 aa8.11□□□□□ -1.11
VPS16-208ENST00000487461 DMBT1Q9UGM3 2413 aaPredicted RBP8.11□□□□□ -1.11
VPS16-208ENST00000487461 A8MWV9 139 aa8.1□□□□□ -1.11
VPS16-208ENST00000487461 FAM229AH3BQW9 127 aa8.1□□□□□ -1.11
VPS16-208ENST00000487461 CRIP1P50238 77 aa8.1□□□□□ -1.11
VPS16-208ENST00000487461 WFDC2Q14508 124 aa8.1□□□□□ -1.11
VPS16-208ENST00000487461 LAGE3Q14657 143 aa8.1□□□□□ -1.11
VPS16-208ENST00000487461 PIK3CD-AS1Q5SR53 167 aa8.1□□□□□ -1.11
VPS16-208ENST00000487461 DMRTA1Q5VZB9 504 aa8.1□□□□□ -1.11
VPS16-208ENST00000487461 C14orf178Q8N769 122 aaPredicted RBP8.1□□□□□ -1.11
VPS16-208ENST00000487461 ASIPP42127 132 aa8.09□□□□□ -1.11
VPS16-208ENST00000487461 FGF8P55075 233 aaPredicted RBP8.09□□□□□ -1.11
VPS16-208ENST00000487461 UBE2G2P60604 165 aa8.09□□□□□ -1.11
VPS16-208ENST00000487461 DAZ4Q86SG3 579 aaKnown RBP8.09□□□□□ -1.11
VPS16-208ENST00000487461 TM2D2Q9BX73 214 aa8.09□□□□□ -1.11
VPS16-208ENST00000487461 DAZ3Q9NR90 486 aaKnown RBP8.09□□□□□ -1.11
VPS16-208ENST00000487461 IL36BQ9NZH7 164 aa8.09□□□□□ -1.11
VPS16-208ENST00000487461 SRRM2Q9UQ35 2752 aaKnown RBP8.08□□□□□ -1.12
VPS16-208ENST00000487461 BORCS7-ASMTA0A0B4J1R7 106 aa8.08□□□□□ -1.12
VPS16-208ENST00000487461 CTXND1A0A1B0GTU2 59 aa8.08□□□□□ -1.12
VPS16-208ENST00000487461 FAM74A7A6NL05 159 aa8.08□□□□□ -1.12
VPS16-208ENST00000487461 B4DEV8 164 aa8.08□□□□□ -1.12
VPS16-208ENST00000487461 PEX7O00628 323 aa8.08□□□□□ -1.12
VPS16-208ENST00000487461 ZC2HC1AQ96GY0 325 aa8.08□□□□□ -1.12
VPS16-208ENST00000487461 GRIFINA4D1Z8 144 aa8.07□□□□□ -1.12
VPS16-208ENST00000487461 H3BVH4 76 aa8.07□□□□□ -1.12
VPS16-208ENST00000487461 LECT2O14960 151 aa8.07□□□□□ -1.12
VPS16-208ENST00000487461 ARMS2P0C7Q2 107 aa8.07□□□□□ -1.12
VPS16-208ENST00000487461 BLOC1S1P78537 153 aa8.07□□□□□ -1.12
VPS16-208ENST00000487461 DNLZQ5SXM8 178 aa8.07□□□□□ -1.12
VPS16-208ENST00000487461 Q86TA4 180 aa8.07□□□□□ -1.12
VPS16-208ENST00000487461 HIST1H2BAQ96A08 127 aa8.07□□□□□ -1.12
VPS16-208ENST00000487461 DNAH8Q96JB1 4490 aa8.07□□□□□ -1.12
VPS16-208ENST00000487461 MYCBP2O75592 4640 aa8.06□□□□□ -1.12
VPS16-208ENST00000487461 TRAV8-3A0A0A6YYJ7 113 aa8.06□□□□□ -1.12
VPS16-208ENST00000487461 LOC105371267A0A1B0GV96 52 aa8.06□□□□□ -1.12
VPS16-208ENST00000487461 M0R036 132 aa8.06□□□□□ -1.12
VPS16-208ENST00000487461 SH2D1AO60880 128 aa8.06□□□□□ -1.12
VPS16-208ENST00000487461 C10orf91Q5T1B1 145 aa8.06□□□□□ -1.12
VPS16-208ENST00000487461 COX8CQ7Z4L0 72 aa8.06□□□□□ -1.12
VPS16-208ENST00000487461 BAALCQ8WXS3 180 aa8.06□□□□□ -1.12
VPS16-208ENST00000487461 NKX6-2Q9C056 277 aaPredicted RBP8.06□□□□□ -1.12
VPS16-208ENST00000487461 ZFP30Q9Y2G7 519 aa8.06□□□□□ -1.12
VPS16-208ENST00000487461 A0A087WWC5 75 aa8.05□□□□□ -1.12
VPS16-208ENST00000487461 TMEM218A2RU14 115 aa8.05□□□□□ -1.12
VPS16-208ENST00000487461 SULT1A2P50226 295 aa8.05□□□□□ -1.12
VPS16-208ENST00000487461 AKR1C8PQ5T2L2 129 aa8.05□□□□□ -1.12
VPS16-208ENST00000487461 SYT8Q8NBV8 401 aa8.05□□□□□ -1.12
VPS16-208ENST00000487461 DNAJC30Q96LL9 226 aa8.05□□□□□ -1.12
VPS16-208ENST00000487461 A0A087WWL8 130 aa8.04□□□□□ -1.12
VPS16-208ENST00000487461 RHODO00212 210 aa8.04□□□□□ -1.12
VPS16-208ENST00000487461 ZNF674Q2M3X9 581 aa8.04□□□□□ -1.12
VPS16-208ENST00000487461 FAM162BQ5T6X4 162 aa8.04□□□□□ -1.12
VPS16-208ENST00000487461 FAM74A4Q5TZK3 123 aa8.04□□□□□ -1.12
VPS16-208ENST00000487461 Q6ZSA8 131 aa8.04□□□□□ -1.12
VPS16-208ENST00000487461 NIT1Q86X76 327 aa8.04□□□□□ -1.12
VPS16-208ENST00000487461 LYPD6BQ8NI32 183 aa8.04□□□□□ -1.12
VPS16-208ENST00000487461 SFRP2Q96HF1 295 aa8.04□□□□□ -1.12
VPS16-208ENST00000487461 CARHSP1Q9Y2V2 147 aaKnown RBP8.04□□□□□ -1.12
VPS16-208ENST00000487461 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.03□□□□□ -1.12
VPS16-208ENST00000487461 TMSB15BA0A087X1C1 80 aa8.03□□□□□ -1.12
VPS16-208ENST00000487461 MAP1LC3B2A6NCE7 125 aa8.03□□□□□ -1.12
VPS16-208ENST00000487461 SCO1O75880 301 aa8.03□□□□□ -1.12
VPS16-208ENST00000487461 SEC11BP0C7V7 166 aa8.03□□□□□ -1.12
VPS16-208ENST00000487461 RAB5CP51148 216 aa8.03□□□□□ -1.12
VPS16-208ENST00000487461 FMC1Q96HJ9 113 aa8.03□□□□□ -1.12
VPS16-208ENST00000487461 MAP1LC3BQ9GZQ8 125 aa8.03□□□□□ -1.12
VPS16-208ENST00000487461 TMA7Q9Y2S6 64 aaKnown RBP8.03□□□□□ -1.12
VPS16-208ENST00000487461 PHLDA3Q9Y5J5 127 aa8.03□□□□□ -1.12
VPS16-208ENST00000487461 TRBV6-1A0A0K0K1D8 114 aa8.02□□□□□ -1.13
VPS16-208ENST00000487461 M0R381 172 aa8.02□□□□□ -1.13
VPS16-208ENST00000487461 LTAP01374 205 aa8.02□□□□□ -1.13
VPS16-208ENST00000487461 H2AFB1P0C5Y9 115 aa8.02□□□□□ -1.13
VPS16-208ENST00000487461 UBE2G1P62253 170 aa8.02□□□□□ -1.13
VPS16-208ENST00000487461 LINC01559Q495D7 138 aa8.02□□□□□ -1.13
VPS16-208ENST00000487461 LINC01620Q4KN68 170 aa8.02□□□□□ -1.13
VPS16-208ENST00000487461 CST9LP1Q5W188 147 aa8.02□□□□□ -1.13
VPS16-208ENST00000487461 SVBPQ8N300 66 aa8.02□□□□□ -1.13
VPS16-208ENST00000487461 SEC11CQ9BY50 192 aa8.02□□□□□ -1.13
VPS16-208ENST00000487461 KLK12Q9UKR0 248 aa8.02□□□□□ -1.13
VPS16-208ENST00000487461 COX11Q9Y6N1 276 aa8.02□□□□□ -1.13
VPS16-208ENST00000487461 URGCP-MRPS24S4R325 110 aa8.02□□□□□ -1.13
VPS16-208ENST00000487461 IGKV2D-24A0A075B6R9 120 aa8.01□□□□□ -1.13
VPS16-208ENST00000487461 APOC3P02656 99 aa8.01□□□□□ -1.13
VPS16-208ENST00000487461 FHITP49789 147 aa8.01□□□□□ -1.13
VPS16-208ENST00000487461 PAGE4O60829 102 aa8□□□□□ -1.13
VPS16-208ENST00000487461 UBE2D3P61077 147 aa8□□□□□ -1.13
VPS16-208ENST00000487461 UBE2D2P62837 147 aa8□□□□□ -1.13
VPS16-208ENST00000487461 ZFP82Q8N141 532 aa8□□□□□ -1.13
VPS16-208ENST00000487461 Q8N976 141 aa8□□□□□ -1.13
VPS16-208ENST00000487461 UBE2WQ96B02 151 aa8□□□□□ -1.13
VPS16-208ENST00000487461 RMI2Q96E14 147 aa8□□□□□ -1.13
VPS16-208ENST00000487461 TCEAL7Q9BRU2 100 aa8□□□□□ -1.13
VPS16-208ENST00000487461 SMDT1Q9H4I9 107 aa8□□□□□ -1.13
VPS16-208ENST00000487461 TRBV7-3A0A075B6L6 115 aa7.99□□□□□ -1.13
VPS16-208ENST00000487461 TRBV10-1A0A0K0K1A3 114 aa7.99□□□□□ -1.13
VPS16-208ENST00000487461 RBFOX3A6NFN3 312 aa7.99□□□□□ -1.13
VPS16-208ENST00000487461 SNAPINO95295 136 aa7.99□□□□□ -1.13
VPS16-208ENST00000487461 PLA2G1BP04054 148 aaKnown RBP7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms