RNA–Protein interactions for RNA: ENST00000487150.2

LIMS3-205, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 3 BASIC

Gene LIMS3, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-205ENST00000487150 CTRLP40313 264 aa10.15□□□□□ -0.78
LIMS3-205ENST00000487150 TIRAPP58753 221 aa10.15□□□□□ -0.78
LIMS3-205ENST00000487150 SOHLH1Q5JUK2 328 aa10.15□□□□□ -0.78
LIMS3-205ENST00000487150 UFSP1Q6NVU6 142 aa10.15□□□□□ -0.78
LIMS3-205ENST00000487150 WDR73Q6P4I2 378 aa10.15□□□□□ -0.78
LIMS3-205ENST00000487150 ZNF575Q86XF7 245 aa10.15□□□□□ -0.78
LIMS3-205ENST00000487150 RNASE7Q9H1E1 156 aaKnown RBP10.15□□□□□ -0.78
LIMS3-205ENST00000487150 NAT8Q9UHE5 227 aa10.15□□□□□ -0.78
LIMS3-205ENST00000487150 LINC00588Q9Y4M8 146 aa10.15□□□□□ -0.78
LIMS3-205ENST00000487150 RYR2Q92736 4967 aa10.15□□□□□ -0.79
LIMS3-205ENST00000487150 TRBV10-1A0A0K0K1A3 114 aa10.14□□□□□ -0.79
LIMS3-205ENST00000487150 BORCS7Q96B45 105 aa10.14□□□□□ -0.79
LIMS3-205ENST00000487150 A0A087WWL8 130 aa10.13□□□□□ -0.79
LIMS3-205ENST00000487150 RAB4BP61018 213 aa10.13□□□□□ -0.79
LIMS3-205ENST00000487150 ESRGQ1W209 222 aa10.13□□□□□ -0.79
LIMS3-205ENST00000487150 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.13□□□□□ -0.79
LIMS3-205ENST00000487150 ZNRF2Q8NHG8 242 aa10.13□□□□□ -0.79
LIMS3-205ENST00000487150 CNFNQ9BYD5 112 aa10.13□□□□□ -0.79
LIMS3-205ENST00000487150 GFRA4Q9GZZ7 299 aa10.13□□□□□ -0.79
LIMS3-205ENST00000487150 OSTCQ9NRP0 149 aa10.13□□□□□ -0.79
LIMS3-205ENST00000487150 FAM231BA6NCW3 169 aa10.12□□□□□ -0.79
LIMS3-205ENST00000487150 CRYGDP07320 174 aa10.12□□□□□ -0.79
LIMS3-205ENST00000487150 GZMBP10144 247 aa10.12□□□□□ -0.79
LIMS3-205ENST00000487150 ZNF56Q15929 161 aa10.12□□□□□ -0.79
LIMS3-205ENST00000487150 SMIM15Q7Z3B0 74 aa10.12□□□□□ -0.79
LIMS3-205ENST00000487150 SAMD10Q9BYL1 202 aa10.12□□□□□ -0.79
LIMS3-205ENST00000487150 KRTAP3-3Q9BYR6 98 aa10.12□□□□□ -0.79
LIMS3-205ENST00000487150 KRTAP3-2Q9BYR7 98 aa10.12□□□□□ -0.79
LIMS3-205ENST00000487150 JPT2Q9H910 190 aa10.12□□□□□ -0.79
LIMS3-205ENST00000487150 RYR3Q15413 4870 aa10.11□□□□□ -0.79
LIMS3-205ENST00000487150 H7C1H1 209 aa10.11□□□□□ -0.79
LIMS3-205ENST00000487150 K7EP13 123 aa10.11□□□□□ -0.79
LIMS3-205ENST00000487150 BTF3P20290 206 aaKnown RBP10.11□□□□□ -0.79
LIMS3-205ENST00000487150 RPL36AP83881 106 aaKnown RBP10.11□□□□□ -0.79
LIMS3-205ENST00000487150 ADIRFQ15847 76 aa10.11□□□□□ -0.79
LIMS3-205ENST00000487150 LYZL1Q6UWQ5 148 aa10.11□□□□□ -0.79
LIMS3-205ENST00000487150 TSKUQ8WUA8 353 aa10.11□□□□□ -0.79
LIMS3-205ENST00000487150 RPL36ALQ969Q0 106 aaKnown RBP10.11□□□□□ -0.79
LIMS3-205ENST00000487150 Q9H8V8 135 aa10.11□□□□□ -0.79
LIMS3-205ENST00000487150 UQCC3Q6UW78 93 aa10.1□□□□□ -0.79
LIMS3-205ENST00000487150 LYPD5Q6UWN5 251 aa10.1□□□□□ -0.79
LIMS3-205ENST00000487150 ATP6V0E2Q8NHE4 81 aa10.1□□□□□ -0.79
LIMS3-205ENST00000487150 ISOC2Q96AB3 205 aa10.1□□□□□ -0.79
LIMS3-205ENST00000487150 IGLV2-18A0A075B6J9 118 aa10.09□□□□□ -0.79
LIMS3-205ENST00000487150 TRAV9-2A0A087WT02 112 aa10.09□□□□□ -0.79
LIMS3-205ENST00000487150 A0A087WWC5 75 aa10.09□□□□□ -0.79
LIMS3-205ENST00000487150 MUC21A0A0G2JKD1 596 aa10.09□□□□□ -0.79
LIMS3-205ENST00000487150 LOC100131303A0A0U1RQF7 123 aa10.09□□□□□ -0.79
LIMS3-205ENST00000487150 NBDYA0A0U1RRE5 68 aa10.09□□□□□ -0.79
LIMS3-205ENST00000487150 MUC21A0A140T8X8 626 aa10.09□□□□□ -0.79
LIMS3-205ENST00000487150 C9JQL5 133 aa10.09□□□□□ -0.79
LIMS3-205ENST00000487150 F5H697 171 aa10.09□□□□□ -0.79
LIMS3-205ENST00000487150 SIVA1O15304 175 aa10.09□□□□□ -0.79
LIMS3-205ENST00000487150 RPL23P62829 140 aaKnown RBP10.09□□□□□ -0.79
LIMS3-205ENST00000487150 SRSF3P84103 164 aaKnown RBP10.09□□□□□ -0.79
LIMS3-205ENST00000487150 PNRC1Q12796 327 aaPredicted RBP10.09□□□□□ -0.79
LIMS3-205ENST00000487150 C14orf178Q8N769 122 aaPredicted RBP10.09□□□□□ -0.79
LIMS3-205ENST00000487150 GTSF1LQ9H1H1 148 aa10.09□□□□□ -0.79
LIMS3-205ENST00000487150 DPH3P1Q9H4G8 78 aa10.09□□□□□ -0.79
LIMS3-205ENST00000487150 TRAV8-6A0A0B4J262 113 aa10.08□□□□□ -0.8
LIMS3-205ENST00000487150 NTF3P20783 257 aa10.08□□□□□ -0.8
LIMS3-205ENST00000487150 FOXA3P55318 350 aaPredicted RBP10.08□□□□□ -0.8
LIMS3-205ENST00000487150 TWIST1Q15672 202 aa10.08□□□□□ -0.8
LIMS3-205ENST00000487150 Q6ZR54 194 aa10.08□□□□□ -0.8
LIMS3-205ENST00000487150 LINC00336Q6ZUF6 198 aa10.08□□□□□ -0.8
LIMS3-205ENST00000487150 OR10G8Q8NGN5 311 aa10.08□□□□□ -0.8
LIMS3-205ENST00000487150 TRBV7-3A0A075B6L6 115 aa10.07□□□□□ -0.8
LIMS3-205ENST00000487150 GAGE12JA6NER3 117 aa10.07□□□□□ -0.8
LIMS3-205ENST00000487150 MGPP08493 103 aa10.07□□□□□ -0.8
LIMS3-205ENST00000487150 LINC00694P0DN24 101 aa10.07□□□□□ -0.8
LIMS3-205ENST00000487150 SSTP61278 116 aa10.07□□□□□ -0.8
LIMS3-205ENST00000487150 IFITM2Q01629 132 aa10.07□□□□□ -0.8
LIMS3-205ENST00000487150 GAGE1Q13065 139 aa10.07□□□□□ -0.8
LIMS3-205ENST00000487150 GAGE4Q13068 117 aa10.07□□□□□ -0.8
LIMS3-205ENST00000487150 GAGE5Q13069 117 aa10.07□□□□□ -0.8
LIMS3-205ENST00000487150 GAGE13Q4V321 117 aa10.07□□□□□ -0.8
LIMS3-205ENST00000487150 LELP1Q5T871 98 aa10.07□□□□□ -0.8
LIMS3-205ENST00000487150 Q6ZSN1 163 aa10.07□□□□□ -0.8
LIMS3-205ENST00000487150 VPS13DQ5THJ4 4388 aa10.07□□□□□ -0.8
LIMS3-205ENST00000487150 HIGD1CA8MV81 97 aa10.06□□□□□ -0.8
LIMS3-205ENST00000487150 PPP1R2P9O14990 202 aa10.06□□□□□ -0.8
LIMS3-205ENST00000487150 EVI2AP22794 236 aa10.06□□□□□ -0.8
LIMS3-205ENST00000487150 C1orf134Q5TEV5 83 aa10.06□□□□□ -0.8
LIMS3-205ENST00000487150 C10orf126Q8N4M7 172 aa10.06□□□□□ -0.8
LIMS3-205ENST00000487150 GTSF1Q8WW33 167 aa10.06□□□□□ -0.8
LIMS3-205ENST00000487150 NAT8BQ9UHF3 227 aa10.06□□□□□ -0.8
LIMS3-205ENST00000487150 V9GYV3 84 aa10.06□□□□□ -0.8
LIMS3-205ENST00000487150 A0A1B0GUT8 65 aa10.05□□□□□ -0.8
LIMS3-205ENST00000487150 M0R2N4 97 aa10.05□□□□□ -0.8
LIMS3-205ENST00000487150 TMEM97Q5BJF2 176 aa10.05□□□□□ -0.8
LIMS3-205ENST00000487150 OR10J3Q5JRS4 329 aa10.05□□□□□ -0.8
LIMS3-205ENST00000487150 PGLYRP4Q96LB8 373 aa10.05□□□□□ -0.8
LIMS3-205ENST00000487150 DNAJC30Q96LL9 226 aa10.05□□□□□ -0.8
LIMS3-205ENST00000487150 KIF25-AS1Q9Y6Z4 181 aa10.05□□□□□ -0.8
LIMS3-205ENST00000487150 DNAH10OSP0CZ25 163 aa10.04□□□□□ -0.8
LIMS3-205ENST00000487150 RIGQ13278 110 aa10.04□□□□□ -0.8
LIMS3-205ENST00000487150 DAZ4Q86SG3 579 aaKnown RBP10.04□□□□□ -0.8
LIMS3-205ENST00000487150 FRZBQ92765 325 aa10.04□□□□□ -0.8
LIMS3-205ENST00000487150 DAZ3Q9NR90 486 aaKnown RBP10.04□□□□□ -0.8
LIMS3-205ENST00000487150 MSRB1Q9NZV6 116 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms