RNA–Protein interactions for RNA: ENST00000486810.5

COPS3-209, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 938 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-209ENST00000486810 LTBP2Q14767 1821 aa3.91□□□□□ -1.78
COPS3-209ENST00000486810 MPDZO75970 2070 aa3.9□□□□□ -1.78
COPS3-209ENST00000486810 IGKV3D-15A0A087WSY6 115 aa3.9□□□□□ -1.79
COPS3-209ENST00000486810 A0A087WW49 117 aa3.9□□□□□ -1.79
COPS3-209ENST00000486810 TRAV12-1A0A0B4J245 112 aa3.9□□□□□ -1.79
COPS3-209ENST00000486810 IGHV3OR16-9A0A0B4J2B5 98 aa3.9□□□□□ -1.79
COPS3-209ENST00000486810 TMEM30CPA0ZSE6 113 aa3.9□□□□□ -1.79
COPS3-209ENST00000486810 H0Y9J4 135 aa3.9□□□□□ -1.79
COPS3-209ENST00000486810 IGHV4-31P0DP07 118 aa3.9□□□□□ -1.79
COPS3-209ENST00000486810 CCL4P13236 92 aa3.9□□□□□ -1.79
COPS3-209ENST00000486810 PLGLAQ15195 96 aa3.9□□□□□ -1.79
COPS3-209ENST00000486810 MRPL51Q4U2R6 128 aaKnown RBP3.9□□□□□ -1.79
COPS3-209ENST00000486810 ATP5EP2Q5VTU8 51 aa3.9□□□□□ -1.79
COPS3-209ENST00000486810 GUSBP11Q6P575 273 aa3.9□□□□□ -1.79
COPS3-209ENST00000486810 ZNF818PQ6ZRF7 136 aa3.9□□□□□ -1.79
COPS3-209ENST00000486810 C7orf65Q6ZTY9 151 aa3.9□□□□□ -1.79
COPS3-209ENST00000486810 VMO1Q7Z5L0 202 aa3.9□□□□□ -1.79
COPS3-209ENST00000486810 TMEM263Q8WUH6 116 aaKnown RBP3.9□□□□□ -1.79
COPS3-209ENST00000486810 TTTY13Q9BZ97 58 aa3.9□□□□□ -1.79
COPS3-209ENST00000486810 RPP21Q9H633 154 aaKnown RBP3.9□□□□□ -1.79
COPS3-209ENST00000486810 ESM1Q9NQ30 184 aa3.9□□□□□ -1.79
COPS3-209ENST00000486810 MYOFQ9NZM1 2061 aa3.9□□□□□ -1.79
COPS3-209ENST00000486810 IGLV1-36A0A0B4J1U3 117 aa3.89□□□□□ -1.79
COPS3-209ENST00000486810 IGHV1OR15-9A0A0B4J2B8 117 aa3.89□□□□□ -1.79
COPS3-209ENST00000486810 TRBV5-4A0A0C4DH59 114 aa3.89□□□□□ -1.79
COPS3-209ENST00000486810 LOC100131303A0A0U1RQF7 123 aa3.89□□□□□ -1.79
COPS3-209ENST00000486810 TMEM223A0PJW6 202 aa3.89□□□□□ -1.79
COPS3-209ENST00000486810 COX7A2LO14548 114 aa3.89□□□□□ -1.79
COPS3-209ENST00000486810 IGHV3-30P01768 117 aa3.89□□□□□ -1.79
COPS3-209ENST00000486810 IGHV4-34P06331 123 aa3.89□□□□□ -1.79
COPS3-209ENST00000486810 IGHV3-30-5P0DP03 117 aa3.89□□□□□ -1.79
COPS3-209ENST00000486810 FGF12P61328 243 aa3.89□□□□□ -1.79
COPS3-209ENST00000486810 BLCAPP62952 87 aa3.89□□□□□ -1.79
COPS3-209ENST00000486810 PRR3P79522 188 aaKnown RBP3.89□□□□□ -1.79
COPS3-209ENST00000486810 LPAL2Q16609 132 aa3.89□□□□□ -1.79
COPS3-209ENST00000486810 SPANXN5Q5MJ07 72 aa3.89□□□□□ -1.79
COPS3-209ENST00000486810 DYNAPQ8N1N2 210 aa3.89□□□□□ -1.79
COPS3-209ENST00000486810 C20orf197Q8N268 126 aa3.89□□□□□ -1.79
COPS3-209ENST00000486810 LINC00337Q8N6G1 96 aa3.89□□□□□ -1.79
COPS3-209ENST00000486810 NKAPP1Q8N9T2 125 aa3.89□□□□□ -1.79
COPS3-209ENST00000486810 DYNLRB2Q8TF09 96 aa3.89□□□□□ -1.79
COPS3-209ENST00000486810 COL4A6Q14031 1691 aa3.88□□□□□ -1.79
COPS3-209ENST00000486810 IGKV1D-17A0A075B6S4 117 aa3.88□□□□□ -1.79
COPS3-209ENST00000486810 A0A1B0GUT8 65 aa3.88□□□□□ -1.79
COPS3-209ENST00000486810 A6NN06 94 aa3.88□□□□□ -1.79
COPS3-209ENST00000486810 ERC2-IT1O76042 136 aa3.88□□□□□ -1.79
COPS3-209ENST00000486810 PIRTP0C851 137 aa3.88□□□□□ -1.79
COPS3-209ENST00000486810 COX6B1P14854 86 aa3.88□□□□□ -1.79
COPS3-209ENST00000486810 LINC00313P59037 77 aa3.88□□□□□ -1.79
COPS3-209ENST00000486810 EIF4EBP1Q13541 118 aaPredicted RBP3.88□□□□□ -1.79
COPS3-209ENST00000486810 CIRBPQ14011 172 aaKnown RBP3.88□□□□□ -1.79
COPS3-209ENST00000486810 S100A7L2Q5SY68 101 aa3.88□□□□□ -1.79
COPS3-209ENST00000486810 ZNF826PQ6ZT77 177 aa3.88□□□□□ -1.79
COPS3-209ENST00000486810 GPHB5Q86YW7 130 aa3.88□□□□□ -1.79
COPS3-209ENST00000486810 ZNF491Q8N8L2 437 aa3.88□□□□□ -1.79
COPS3-209ENST00000486810 PCNX2A6NKB5 2137 aa3.88□□□□□ -1.79
COPS3-209ENST00000486810 A0A0J9YY99 117 aa3.87□□□□□ -1.79
COPS3-209ENST00000486810 EPOPA6NHQ4 379 aa3.87□□□□□ -1.79
COPS3-209ENST00000486810 IGKV1-5P01602 117 aa3.87□□□□□ -1.79
COPS3-209ENST00000486810 IAPPP10997 89 aa3.87□□□□□ -1.79
COPS3-209ENST00000486810 FUSP35637 526 aaKnown RBP eCLIP3.87□□□□□ -1.79
COPS3-209ENST00000486810 UBE2AP49459 152 aa3.87□□□□□ -1.79
COPS3-209ENST00000486810 FXYD4P59646 89 aa3.87□□□□□ -1.79
COPS3-209ENST00000486810 TFF3Q07654 80 aa3.87□□□□□ -1.79
COPS3-209ENST00000486810 ORMDL3Q8N138 153 aa3.87□□□□□ -1.79
COPS3-209ENST00000486810 BPTFQ12830 3046 aa3.87□□□□□ -1.79
COPS3-209ENST00000486810 IGHV3OR16-10A0A075B7F0 116 aa3.86□□□□□ -1.79
COPS3-209ENST00000486810 TRAV40A0A0B4J280 105 aa3.86□□□□□ -1.79
COPS3-209ENST00000486810 IGKV1-9A0A0C4DH69 117 aa3.86□□□□□ -1.79
COPS3-209ENST00000486810 A0A0G2JRQ6 117 aa3.86□□□□□ -1.79
COPS3-209ENST00000486810 F8VRH5 84 aa3.86□□□□□ -1.79
COPS3-209ENST00000486810 BUB1B-PAK6H3BSN5 160 aa3.86□□□□□ -1.79
COPS3-209ENST00000486810 MIFP14174 115 aa3.86□□□□□ -1.79
COPS3-209ENST00000486810 SFTA2Q6UW10 78 aa3.86□□□□□ -1.79
COPS3-209ENST00000486810 Q9HAA7 133 aa3.86□□□□□ -1.79
COPS3-209ENST00000486810 SPRR3Q9UBC9 169 aa3.86□□□□□ -1.79
COPS3-209ENST00000486810 NACAE9PAV3 2078 aa3.86□□□□□ -1.79
COPS3-209ENST00000486810 FREM3P0C091 2139 aa3.86□□□□□ -1.79
COPS3-209ENST00000486810 SPTBP11277 2137 aa3.85□□□□□ -1.79
COPS3-209ENST00000486810 TRBV6-1A0A0K0K1D8 114 aa3.85□□□□□ -1.79
COPS3-209ENST00000486810 LOC389332A0A1B0GUA5 103 aa3.85□□□□□ -1.79
COPS3-209ENST00000486810 E7EUB6 86 aa3.85□□□□□ -1.79
COPS3-209ENST00000486810 F8WEM9 126 aa3.85□□□□□ -1.79
COPS3-209ENST00000486810 SH2D1AO60880 128 aa3.85□□□□□ -1.79
COPS3-209ENST00000486810 IGLV3-25P01717 112 aa3.85□□□□□ -1.79
COPS3-209ENST00000486810 IGLV3-27P01718 113 aa3.85□□□□□ -1.79
COPS3-209ENST00000486810 RNASE4P34096 147 aaKnown RBP3.85□□□□□ -1.79
COPS3-209ENST00000486810 ASB16-AS1Q495Z4 193 aa3.85□□□□□ -1.79
COPS3-209ENST00000486810 LINC01554Q52M75 96 aa3.85□□□□□ -1.79
COPS3-209ENST00000486810 IGFL3Q6UXB1 125 aa3.85□□□□□ -1.79
COPS3-209ENST00000486810 C11orf72Q8NBR9 251 aa3.85□□□□□ -1.79
COPS3-209ENST00000486810 BPESC1Q9GZL8 116 aa3.85□□□□□ -1.79
COPS3-209ENST00000486810 TIMM8BQ9Y5J9 83 aaPredicted RBP3.85□□□□□ -1.79
COPS3-209ENST00000486810 SMAD5-AS1Q9Y6J3 95 aa3.85□□□□□ -1.79
COPS3-209ENST00000486810 NOTCH3Q9UM47 2321 aa3.84□□□□□ -1.79
COPS3-209ENST00000486810 IGHV1OR21-1A0A087WYE8 117 aa3.84□□□□□ -1.79
COPS3-209ENST00000486810 ZNF815PA8K554 130 aa3.84□□□□□ -1.79
COPS3-209ENST00000486810 M0R135 149 aa3.84□□□□□ -1.79
COPS3-209ENST00000486810 PLXNB1O43157 2135 aa3.84□□□□□ -1.79
COPS3-209ENST00000486810 EDDM3BP56851 147 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms