RNA–Protein interactions for RNA: ENST00000486515.1

UBR4-214, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-214ENST00000486515 GAGE12BA1L429 117 aa5.01□□□□□ -1.61
UBR4-214ENST00000486515 F5H697 171 aa5.01□□□□□ -1.61
UBR4-214ENST00000486515 RHODO00212 210 aa5.01□□□□□ -1.61
UBR4-214ENST00000486515 DEFB4AO15263 64 aa5.01□□□□□ -1.61
UBR4-214ENST00000486515 SNAI2O43623 268 aa5.01□□□□□ -1.61
UBR4-214ENST00000486515 GAGE7O76087 117 aa5.01□□□□□ -1.61
UBR4-214ENST00000486515 LINC00614P0C842 121 aa5.01□□□□□ -1.61
UBR4-214ENST00000486515 GAGE12FP0CL80 117 aa5.01□□□□□ -1.61
UBR4-214ENST00000486515 GAGE12GP0CL81 117 aa5.01□□□□□ -1.61
UBR4-214ENST00000486515 GAGE12IP0CL82 117 aa5.01□□□□□ -1.61
UBR4-214ENST00000486515 NTF3P20783 257 aa5.01□□□□□ -1.61
UBR4-214ENST00000486515 CAMPP49913 170 aa5.01□□□□□ -1.61
UBR4-214ENST00000486515 FOXA3P55318 350 aaPredicted RBP5.01□□□□□ -1.61
UBR4-214ENST00000486515 FAM3BP58499 235 aaPredicted RBP5.01□□□□□ -1.61
UBR4-214ENST00000486515 HBBP68871 147 aa5.01□□□□□ -1.61
UBR4-214ENST00000486515 C21orf62-AS1Q17RA5 79 aa5.01□□□□□ -1.61
UBR4-214ENST00000486515 PIK3CD-AS1Q5SR53 167 aa5.01□□□□□ -1.61
UBR4-214ENST00000486515 FAM74A4Q5TZK3 123 aa5.01□□□□□ -1.61
UBR4-214ENST00000486515 FAM222AQ5U5X8 452 aa5.01□□□□□ -1.61
UBR4-214ENST00000486515 NUP35Q8NFH5 326 aa5.01□□□□□ -1.61
UBR4-214ENST00000486515 C11orf45Q8TAV5 145 aa5.01□□□□□ -1.61
UBR4-214ENST00000486515 LYSTQ99698 3801 aa5.01□□□□□ -1.61
UBR4-214ENST00000486515 MRPL16Q9NX20 251 aaKnown RBP5.01□□□□□ -1.61
UBR4-214ENST00000486515 U3KQK5 164 aa5.01□□□□□ -1.61
UBR4-214ENST00000486515 CSMD3Q7Z407 3707 aa5□□□□□ -1.61
UBR4-214ENST00000486515 TRGV4A0A0C4DH28 118 aa5□□□□□ -1.61
UBR4-214ENST00000486515 MUC21A0A0G2JKD1 596 aa5□□□□□ -1.61
UBR4-214ENST00000486515 A0A0J9YWU9 116 aa5□□□□□ -1.61
UBR4-214ENST00000486515 MUC21A0A140T8X8 626 aa5□□□□□ -1.61
UBR4-214ENST00000486515 PRM2P04554 102 aa5□□□□□ -1.61
UBR4-214ENST00000486515 ATP5G1P05496 136 aa5□□□□□ -1.61
UBR4-214ENST00000486515 MGPP08493 103 aa5□□□□□ -1.61
UBR4-214ENST00000486515 IGLC6P0CF74 106 aa5□□□□□ -1.61
UBR4-214ENST00000486515 RNASE3P12724 160 aaKnown RBP5□□□□□ -1.61
UBR4-214ENST00000486515 CTRLP40313 264 aa5□□□□□ -1.61
UBR4-214ENST00000486515 GAGE1Q13065 139 aa5□□□□□ -1.61
UBR4-214ENST00000486515 SLAQ13239 276 aa5□□□□□ -1.61
UBR4-214ENST00000486515 ZNF56Q15929 161 aa5□□□□□ -1.61
UBR4-214ENST00000486515 MRPL54Q6P161 138 aaKnown RBP5□□□□□ -1.61
UBR4-214ENST00000486515 RASL11AQ6T310 242 aa5□□□□□ -1.61
UBR4-214ENST00000486515 Q8NAQ8 132 aa5□□□□□ -1.61
UBR4-214ENST00000486515 OR10AG1Q8NH19 301 aa5□□□□□ -1.61
UBR4-214ENST00000486515 GTSF1Q8WW33 167 aa5□□□□□ -1.61
UBR4-214ENST00000486515 RASL10AQ92737 203 aa5□□□□□ -1.61
UBR4-214ENST00000486515 FRZBQ92765 325 aa5□□□□□ -1.61
UBR4-214ENST00000486515 PTH2Q96A98 100 aa5□□□□□ -1.61
UBR4-214ENST00000486515 C9orf85Q96MD7 179 aa5□□□□□ -1.61
UBR4-214ENST00000486515 SSBP4Q9BWG4 385 aaPredicted RBP5□□□□□ -1.61
UBR4-214ENST00000486515 TRAV4A0A0B4J268 109 aa4.99□□□□□ -1.61
UBR4-214ENST00000486515 H7C1H1 209 aa4.99□□□□□ -1.61
UBR4-214ENST00000486515 MT-ND6P03923 174 aa4.99□□□□□ -1.61
UBR4-214ENST00000486515 HTN3P15516 51 aa4.99□□□□□ -1.61
UBR4-214ENST00000486515 TMEM88Q6PEY1 159 aa4.99□□□□□ -1.61
UBR4-214ENST00000486515 C11orf72Q8NBR9 251 aa4.99□□□□□ -1.61
UBR4-214ENST00000486515 FAM210BQ96KR6 192 aa4.99□□□□□ -1.61
UBR4-214ENST00000486515 DPH3P1Q9H4G8 78 aa4.99□□□□□ -1.61
UBR4-214ENST00000486515 SCRT2Q9NQ03 307 aa4.99□□□□□ -1.61
UBR4-214ENST00000486515 DKK2Q9UBU2 259 aa4.99□□□□□ -1.61
UBR4-214ENST00000486515 FRAS1Q86XX4 4008 aa4.99□□□□□ -1.61
UBR4-214ENST00000486515 IGHV4-4A0A075B6R2 117 aa4.98□□□□□ -1.61
UBR4-214ENST00000486515 TCAPO15273 167 aa4.98□□□□□ -1.61
UBR4-214ENST00000486515 PPP1R17O96001 155 aa4.98□□□□□ -1.61
UBR4-214ENST00000486515 IGHV3-53P01767 116 aa4.98□□□□□ -1.61
UBR4-214ENST00000486515 HLA-DQA1P01909 254 aa4.98□□□□□ -1.61
UBR4-214ENST00000486515 Q6ZTI0 123 aa4.98□□□□□ -1.61
UBR4-214ENST00000486515 C14orf178Q8N769 122 aaPredicted RBP4.98□□□□□ -1.61
UBR4-214ENST00000486515 MUC7Q8TAX7 377 aa4.98□□□□□ -1.61
UBR4-214ENST00000486515 PRADC1Q9BSG0 188 aa4.98□□□□□ -1.61
UBR4-214ENST00000486515 CNFNQ9BYD5 112 aa4.98□□□□□ -1.61
UBR4-214ENST00000486515 TMEM191AQ9H0A3 160 aa4.98□□□□□ -1.61
UBR4-214ENST00000486515 AGRNO00468 2067 aa4.98□□□□□ -1.61
UBR4-214ENST00000486515 TRBV24-1A0A075B6N3 115 aa4.97□□□□□ -1.61
UBR4-214ENST00000486515 A0A087WWL8 130 aa4.97□□□□□ -1.61
UBR4-214ENST00000486515 TGIF2-C20orf24A0A0A6YYL0 155 aa4.97□□□□□ -1.61
UBR4-214ENST00000486515 TRAV10A0A0B4J240 114 aa4.97□□□□□ -1.61
UBR4-214ENST00000486515 F5H768 121 aa4.97□□□□□ -1.61
UBR4-214ENST00000486515 CKS2P33552 79 aa4.97□□□□□ -1.61
UBR4-214ENST00000486515 RPS10P46783 165 aaKnown RBP4.97□□□□□ -1.61
UBR4-214ENST00000486515 AKR1D1P51857 326 aa4.97□□□□□ -1.61
UBR4-214ENST00000486515 ELOBQ15370 118 aa4.97□□□□□ -1.61
UBR4-214ENST00000486515 ATRAIDQ6UW56 229 aa4.97□□□□□ -1.61
UBR4-214ENST00000486515 ZFP2Q6ZN57 461 aa4.97□□□□□ -1.61
UBR4-214ENST00000486515 CBLN2Q8IUK8 224 aa4.97□□□□□ -1.61
UBR4-214ENST00000486515 GNB1LQ9BYB4 327 aa4.97□□□□□ -1.61
UBR4-214ENST00000486515 TRAPPC1Q9Y5R8 145 aa4.97□□□□□ -1.61
UBR4-214ENST00000486515 DEFB131BA0A096LNP1 70 aa4.96□□□□□ -1.62
UBR4-214ENST00000486515 IGHV3-73A0A0B4J1V6 119 aa4.96□□□□□ -1.62
UBR4-214ENST00000486515 PLAC8L1A1L4L8 177 aa4.96□□□□□ -1.62
UBR4-214ENST00000486515 H0Y8G0 127 aa4.96□□□□□ -1.62
UBR4-214ENST00000486515 RS1O15537 224 aa4.96□□□□□ -1.62
UBR4-214ENST00000486515 NXPH4O95158 308 aa4.96□□□□□ -1.62
UBR4-214ENST00000486515 APCSP02743 223 aa4.96□□□□□ -1.62
UBR4-214ENST00000486515 PPBPP02775 128 aa4.96□□□□□ -1.62
UBR4-214ENST00000486515 EVI2AP22794 236 aa4.96□□□□□ -1.62
UBR4-214ENST00000486515 FABP9Q0Z7S8 132 aa4.96□□□□□ -1.62
UBR4-214ENST00000486515 RHOHQ15669 191 aa4.96□□□□□ -1.62
UBR4-214ENST00000486515 CFAP126Q5VTH2 177 aa4.96□□□□□ -1.62
UBR4-214ENST00000486515 MRAP2Q96G30 205 aa4.96□□□□□ -1.62
UBR4-214ENST00000486515 C18orf15Q96N68 181 aa4.96□□□□□ -1.62
UBR4-214ENST00000486515 MSRB1Q9NZV6 116 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms