RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 TRGC1P0CF51 173 aa8.01□□□□□ -1.13
NUP50-216ENST00000486184 ADCYAP1P18509 176 aa8.01□□□□□ -1.13
NUP50-216ENST00000486184 CTRLP40313 264 aa8.01□□□□□ -1.13
NUP50-216ENST00000486184 FHL2Q14192 279 aa8.01□□□□□ -1.13
NUP50-216ENST00000486184 TWIST1Q15672 202 aa8.01□□□□□ -1.13
NUP50-216ENST00000486184 NDUFA5Q16718 116 aa8.01□□□□□ -1.13
NUP50-216ENST00000486184 ZFP2Q6ZN57 461 aa8.01□□□□□ -1.13
NUP50-216ENST00000486184 POM121L12Q8N7R1 296 aa8.01□□□□□ -1.13
NUP50-216ENST00000486184 ANAPC16Q96DE5 110 aa8.01□□□□□ -1.13
NUP50-216ENST00000486184 PGLYRP4Q96LB8 373 aa8.01□□□□□ -1.13
NUP50-216ENST00000486184 HHLA3Q9XRX5 114 aa8.01□□□□□ -1.13
NUP50-216ENST00000486184 A0A087WWL8 130 aa8□□□□□ -1.13
NUP50-216ENST00000486184 HIGD1CA8MV81 97 aa8□□□□□ -1.13
NUP50-216ENST00000486184 ZNF56Q15929 161 aa8□□□□□ -1.13
NUP50-216ENST00000486184 WDR73Q6P4I2 378 aa8□□□□□ -1.13
NUP50-216ENST00000486184 SMIM15Q7Z3B0 74 aa8□□□□□ -1.13
NUP50-216ENST00000486184 GTSF1Q8WW33 167 aa8□□□□□ -1.13
NUP50-216ENST00000486184 JPT2Q9H910 190 aa8□□□□□ -1.13
NUP50-216ENST00000486184 NAT8BQ9UHF3 227 aa8□□□□□ -1.13
NUP50-216ENST00000486184 H3BNG1 76 aa7.99□□□□□ -1.13
NUP50-216ENST00000486184 NTF3P20783 257 aa7.99□□□□□ -1.13
NUP50-216ENST00000486184 CRYBA4P53673 196 aa7.99□□□□□ -1.13
NUP50-216ENST00000486184 RHOHQ15669 191 aa7.99□□□□□ -1.13
NUP50-216ENST00000486184 RNF212Q495C1 297 aa7.99□□□□□ -1.13
NUP50-216ENST00000486184 C14orf178Q8N769 122 aaPredicted RBP7.99□□□□□ -1.13
NUP50-216ENST00000486184 PRADC1Q9BSG0 188 aa7.99□□□□□ -1.13
NUP50-216ENST00000486184 APLNQ9ULZ1 77 aa7.99□□□□□ -1.13
NUP50-216ENST00000486184 ICOSQ9Y6W8 199 aa7.99□□□□□ -1.13
NUP50-216ENST00000486184 DNAH7Q8WXX0 4024 aa7.98□□□□□ -1.13
NUP50-216ENST00000486184 A0A1B0GUT8 65 aa7.98□□□□□ -1.13
NUP50-216ENST00000486184 F5H697 171 aa7.98□□□□□ -1.13
NUP50-216ENST00000486184 MGPP08493 103 aa7.98□□□□□ -1.13
NUP50-216ENST00000486184 GATA1P15976 413 aaPredicted RBP7.98□□□□□ -1.13
NUP50-216ENST00000486184 FOXA3P55318 350 aaPredicted RBP7.98□□□□□ -1.13
NUP50-216ENST00000486184 RIGQ13278 110 aa7.98□□□□□ -1.13
NUP50-216ENST00000486184 CNFNQ9BYD5 112 aa7.98□□□□□ -1.13
NUP50-216ENST00000486184 SAMD10Q9BYL1 202 aa7.98□□□□□ -1.13
NUP50-216ENST00000486184 MSRB1Q9NZV6 116 aa7.98□□□□□ -1.13
NUP50-216ENST00000486184 TRBV6-4A0A1B0GX49 114 aa7.97□□□□□ -1.13
NUP50-216ENST00000486184 SMIM27A0A1W2PRY6 76 aa7.97□□□□□ -1.13
NUP50-216ENST00000486184 K7EQD1 137 aa7.97□□□□□ -1.13
NUP50-216ENST00000486184 CRYGDP07320 174 aa7.97□□□□□ -1.13
NUP50-216ENST00000486184 GYPEP15421 78 aa7.97□□□□□ -1.13
NUP50-216ENST00000486184 SRIP30626 198 aa7.97□□□□□ -1.13
NUP50-216ENST00000486184 UBE2DNLQ8IWF7 75 aa7.97□□□□□ -1.13
NUP50-216ENST00000486184 SLC25A29Q8N8R3 303 aa7.97□□□□□ -1.13
NUP50-216ENST00000486184 VSIG2Q96IQ7 327 aa7.97□□□□□ -1.13
NUP50-216ENST00000486184 DPH3P1Q9H4G8 78 aa7.97□□□□□ -1.13
NUP50-216ENST00000486184 CARHSP1Q9Y2V2 147 aaKnown RBP7.97□□□□□ -1.13
NUP50-216ENST00000486184 TENM2Q9NT68 2774 aa7.96□□□□□ -1.13
NUP50-216ENST00000486184 EREGO14944 169 aa7.96□□□□□ -1.14
NUP50-216ENST00000486184 APOC3P02656 99 aa7.96□□□□□ -1.14
NUP50-216ENST00000486184 P0DMU3 169 aa7.96□□□□□ -1.14
NUP50-216ENST00000486184 FAM231AP0DMU4 169 aa7.96□□□□□ -1.14
NUP50-216ENST00000486184 FAM231CP0DMU5 169 aa7.96□□□□□ -1.14
NUP50-216ENST00000486184 RAB4BP61018 213 aa7.96□□□□□ -1.14
NUP50-216ENST00000486184 MRPL23Q16540 153 aaKnown RBP7.96□□□□□ -1.14
NUP50-216ENST00000486184 C10orf91Q5T1B1 145 aa7.96□□□□□ -1.14
NUP50-216ENST00000486184 UFSP1Q6NVU6 142 aa7.96□□□□□ -1.14
NUP50-216ENST00000486184 NUP35Q8NFH5 326 aa7.96□□□□□ -1.14
NUP50-216ENST00000486184 CTDSP1Q9GZU7 261 aa7.96□□□□□ -1.14
NUP50-216ENST00000486184 H7C1H1 209 aa7.95□□□□□ -1.14
NUP50-216ENST00000486184 S100A8P05109 93 aa7.95□□□□□ -1.14
NUP50-216ENST00000486184 EVI2AP22794 236 aa7.95□□□□□ -1.14
NUP50-216ENST00000486184 RHEBQ15382 184 aa7.95□□□□□ -1.14
NUP50-216ENST00000486184 KCNIP4Q6PIL6 250 aa7.95□□□□□ -1.14
NUP50-216ENST00000486184 SH2D6Q7Z4S9 175 aa7.95□□□□□ -1.14
NUP50-216ENST00000486184 SLC7A5P1Q8MH63 180 aa7.95□□□□□ -1.14
NUP50-216ENST00000486184 SVBPQ8N300 66 aa7.95□□□□□ -1.14
NUP50-216ENST00000486184 CSMD3Q7Z407 3707 aa7.94□□□□□ -1.14
NUP50-216ENST00000486184 A0A096LPF7 62 aa7.94□□□□□ -1.14
NUP50-216ENST00000486184 A0A1B0GW15 77 aa7.94□□□□□ -1.14
NUP50-216ENST00000486184 SNAPINO95295 136 aa7.94□□□□□ -1.14
NUP50-216ENST00000486184 LY6G6CO95867 125 aa7.94□□□□□ -1.14
NUP50-216ENST00000486184 S100PP25815 95 aa7.94□□□□□ -1.14
NUP50-216ENST00000486184 CCL18P55774 89 aa7.94□□□□□ -1.14
NUP50-216ENST00000486184 NEGR1Q7Z3B1 354 aa7.94□□□□□ -1.14
NUP50-216ENST00000486184 CLRN3Q8NCR9 226 aa7.94□□□□□ -1.14
NUP50-216ENST00000486184 RPS10P5Q9NQ39 176 aa7.94□□□□□ -1.14
NUP50-216ENST00000486184 TRBV10-1A0A0K0K1A3 114 aa7.93□□□□□ -1.14
NUP50-216ENST00000486184 LOC100131303A0A0U1RQF7 123 aa7.93□□□□□ -1.14
NUP50-216ENST00000486184 C7orf77A4D0Y5 90 aa7.93□□□□□ -1.14
NUP50-216ENST00000486184 GAGE12JA6NER3 117 aa7.93□□□□□ -1.14
NUP50-216ENST00000486184 CAMPP49913 170 aa7.93□□□□□ -1.14
NUP50-216ENST00000486184 HBBP68871 147 aa7.93□□□□□ -1.14
NUP50-216ENST00000486184 RPL36AP83881 106 aaKnown RBP7.93□□□□□ -1.14
NUP50-216ENST00000486184 GAGE1Q13065 139 aa7.93□□□□□ -1.14
NUP50-216ENST00000486184 GAGE4Q13068 117 aa7.93□□□□□ -1.14
NUP50-216ENST00000486184 GAGE5Q13069 117 aa7.93□□□□□ -1.14
NUP50-216ENST00000486184 GAGE13Q4V321 117 aa7.93□□□□□ -1.14
NUP50-216ENST00000486184 LGALS9CQ6DKI2 356 aa7.93□□□□□ -1.14
NUP50-216ENST00000486184 MRPL54Q6P161 138 aaKnown RBP7.93□□□□□ -1.14
NUP50-216ENST00000486184 Q6ZSN1 163 aa7.93□□□□□ -1.14
NUP50-216ENST00000486184 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.93□□□□□ -1.14
NUP50-216ENST00000486184 RPL36ALQ969Q0 106 aaKnown RBP7.93□□□□□ -1.14
NUP50-216ENST00000486184 KIF25-AS1Q9Y6Z4 181 aa7.93□□□□□ -1.14
NUP50-216ENST00000486184 A0A087WWC5 75 aa7.92□□□□□ -1.14
NUP50-216ENST00000486184 FAM3BP58499 235 aaPredicted RBP7.92□□□□□ -1.14
NUP50-216ENST00000486184 LINC00476Q8WZB0 136 aa7.92□□□□□ -1.14
NUP50-216ENST00000486184 IMMP2LQ96T52 175 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms