RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 LINC01590Q5TEZ4 76 aa3.13□□□□□ -1.91
RTN4-213ENST00000485749 IGFL3Q6UXB1 125 aa3.13□□□□□ -1.91
RTN4-213ENST00000485749 C6orf201Q7Z4U5 140 aa3.13□□□□□ -1.91
RTN4-213ENST00000485749 LINC00643Q86TS7 51 aa3.13□□□□□ -1.91
RTN4-213ENST00000485749 Q96M85 177 aa3.13□□□□□ -1.91
RTN4-213ENST00000485749 LRRK1Q38SD2 2015 aa3.13□□□□□ -1.91
RTN4-213ENST00000485749 DYSFO75923 2080 aa3.12□□□□□ -1.91
RTN4-213ENST00000485749 BPY2O14599 106 aa3.12□□□□□ -1.91
RTN4-213ENST00000485749 SH2D1AO60880 128 aa3.12□□□□□ -1.91
RTN4-213ENST00000485749 PRH1P02810 166 aa3.12□□□□□ -1.91
RTN4-213ENST00000485749 IGHV1-8P0DP01 117 aa3.12□□□□□ -1.91
RTN4-213ENST00000485749 Q1T7F1 81 aa3.12□□□□□ -1.91
RTN4-213ENST00000485749 LINC00269Q8N2A0 174 aa3.12□□□□□ -1.91
RTN4-213ENST00000485749 TMEM141Q96I45 108 aa3.12□□□□□ -1.91
RTN4-213ENST00000485749 SLC50A1Q9BRV3 221 aa3.12□□□□□ -1.91
RTN4-213ENST00000485749 R4GMQ9 66 aa3.12□□□□□ -1.91
RTN4-213ENST00000485749 C2orf16Q68DN1 1984 aa3.12□□□□□ -1.91
RTN4-213ENST00000485749 SCN8AQ9UQD0 1980 aa3.12□□□□□ -1.91
RTN4-213ENST00000485749 COL4A6Q14031 1691 aa3.11□□□□□ -1.91
RTN4-213ENST00000485749 TRAV3A0A0B4J244 114 aa3.11□□□□□ -1.91
RTN4-213ENST00000485749 BCE1O60756 84 aa3.11□□□□□ -1.91
RTN4-213ENST00000485749 LY6HO94772 140 aa3.11□□□□□ -1.91
RTN4-213ENST00000485749 STATHP02808 62 aa3.11□□□□□ -1.91
RTN4-213ENST00000485749 COX8AP10176 69 aa3.11□□□□□ -1.91
RTN4-213ENST00000485749 SUPT4H1P63272 117 aaKnown RBP3.11□□□□□ -1.91
RTN4-213ENST00000485749 ZNF117Q03924 483 aa3.11□□□□□ -1.91
RTN4-213ENST00000485749 ESRGQ1W209 222 aa3.11□□□□□ -1.91
RTN4-213ENST00000485749 DEFB134Q4QY38 66 aa3.11□□□□□ -1.91
RTN4-213ENST00000485749 BAGE3Q86Y29 109 aa3.11□□□□□ -1.91
RTN4-213ENST00000485749 BAGE2Q86Y30 109 aa3.11□□□□□ -1.91
RTN4-213ENST00000485749 Q8N976 141 aa3.11□□□□□ -1.91
RTN4-213ENST00000485749 ODF3Q96PU9 254 aa3.11□□□□□ -1.91
RTN4-213ENST00000485749 DYNLRB1Q9NP97 96 aa3.11□□□□□ -1.91
RTN4-213ENST00000485749 TRAPPC1Q9Y5R8 145 aa3.11□□□□□ -1.91
RTN4-213ENST00000485749 FER1L5A0AVI2 2057 aa3.11□□□□□ -1.91
RTN4-213ENST00000485749 ANKRD12Q6UB98 2062 aa3.1□□□□□ -1.91
RTN4-213ENST00000485749 PLXNA2O75051 1894 aa3.1□□□□□ -1.91
RTN4-213ENST00000485749 PLXNA4Q9HCM2 1894 aa3.1□□□□□ -1.91
RTN4-213ENST00000485749 IGLV3-9A0A075B6K5 115 aa3.1□□□□□ -1.91
RTN4-213ENST00000485749 GNRH2O43555 120 aa3.1□□□□□ -1.91
RTN4-213ENST00000485749 CCL5P13501 91 aa3.1□□□□□ -1.91
RTN4-213ENST00000485749 ZNF56Q15929 161 aa3.1□□□□□ -1.91
RTN4-213ENST00000485749 C2orf83Q53S99 150 aa3.1□□□□□ -1.91
RTN4-213ENST00000485749 C16orf47Q6ZP98 133 aaPredicted RBP3.1□□□□□ -1.91
RTN4-213ENST00000485749 ZNF525Q8N782 197 aa3.1□□□□□ -1.91
RTN4-213ENST00000485749 C20orf203Q8NBC4 194 aa3.1□□□□□ -1.91
RTN4-213ENST00000485749 ZNF563Q8TA94 476 aa3.1□□□□□ -1.91
RTN4-213ENST00000485749 SMCR5Q8TEV8 140 aa3.1□□□□□ -1.91
RTN4-213ENST00000485749 SCRT1Q9BWW7 348 aa3.1□□□□□ -1.91
RTN4-213ENST00000485749 MANBALQ9NQG1 85 aa3.1□□□□□ -1.91
RTN4-213ENST00000485749 ZNF581Q9P0T4 197 aa3.1□□□□□ -1.91
RTN4-213ENST00000485749 HIGD1BQ9P298 99 aa3.1□□□□□ -1.91
RTN4-213ENST00000485749 NDUFA12Q9UI09 145 aa3.1□□□□□ -1.91
RTN4-213ENST00000485749 CCL26Q9Y258 94 aa3.1□□□□□ -1.91
RTN4-213ENST00000485749 TIMM9Q9Y5J7 89 aa3.1□□□□□ -1.91
RTN4-213ENST00000485749 SCN5AQ14524 2016 aa3.1□□□□□ -1.91
RTN4-213ENST00000485749 KIAA1671Q9BY89 1806 aa3.09□□□□□ -1.91
RTN4-213ENST00000485749 ALPK3Q96L96 1907 aa3.09□□□□□ -1.91
RTN4-213ENST00000485749 IGKV1D-42A0A075B6H8 117 aa3.09□□□□□ -1.91
RTN4-213ENST00000485749 IGHV3-73A0A0B4J1V6 119 aa3.09□□□□□ -1.91
RTN4-213ENST00000485749 TRAV13-2A0A0B4J235 113 aa3.09□□□□□ -1.91
RTN4-213ENST00000485749 A0A1W2PPR1 153 aa3.09□□□□□ -1.91
RTN4-213ENST00000485749 TCRBV4S1A1TA0A5B7 111 aa3.09□□□□□ -1.91
RTN4-213ENST00000485749 CYSRT1A8MQ03 144 aa3.09□□□□□ -1.91
RTN4-213ENST00000485749 IGKV1D-33P01593 117 aa3.09□□□□□ -1.91
RTN4-213ENST00000485749 IGKV1-33P01594 117 aa3.09□□□□□ -1.91
RTN4-213ENST00000485749 TRGV3P03979 118 aa3.09□□□□□ -1.91
RTN4-213ENST00000485749 CISD3P0C7P0 127 aa3.09□□□□□ -1.91
RTN4-213ENST00000485749 CFC1BP0CG36 223 aa3.09□□□□□ -1.91
RTN4-213ENST00000485749 CFC1P0CG37 223 aa3.09□□□□□ -1.91
RTN4-213ENST00000485749 CGB3P0DN86 165 aa3.09□□□□□ -1.91
RTN4-213ENST00000485749 CGB7P0DN87 165 aa3.09□□□□□ -1.91
RTN4-213ENST00000485749 RPL28P46779 137 aaKnown RBP3.09□□□□□ -1.91
RTN4-213ENST00000485749 C1orf147Q96MC9 270 aaPredicted RBP3.09□□□□□ -1.91
RTN4-213ENST00000485749 LINC01600Q96MT4 127 aa3.09□□□□□ -1.91
RTN4-213ENST00000485749 DOCK7Q96N67 2140 aa3.09□□□□□ -1.91
RTN4-213ENST00000485749 TIMM21Q9BVV7 248 aa3.09□□□□□ -1.91
RTN4-213ENST00000485749 ARL2-SNX15V9GYD0 113 aa3.09□□□□□ -1.91
RTN4-213ENST00000485749 BPTFQ12830 3046 aa3.09□□□□□ -1.92
RTN4-213ENST00000485749 TRPM7Q96QT4 1865 aa3.08□□□□□ -1.92
RTN4-213ENST00000485749 IGHV1-3A0A0C4DH29 117 aa3.08□□□□□ -1.92
RTN4-213ENST00000485749 TMEM14DPA8MWL7 114 aa3.08□□□□□ -1.92
RTN4-213ENST00000485749 A8MWP4 228 aa3.08□□□□□ -1.92
RTN4-213ENST00000485749 H0YGG7 62 aa3.08□□□□□ -1.92
RTN4-213ENST00000485749 INSP01308 110 aa3.08□□□□□ -1.92
RTN4-213ENST00000485749 IGHV1-46P01743 117 aa3.08□□□□□ -1.92
RTN4-213ENST00000485749 C3orf79P0CE67 100 aa3.08□□□□□ -1.92
RTN4-213ENST00000485749 Q6P435 159 aa3.08□□□□□ -1.92
RTN4-213ENST00000485749 CASC2Q6XLA1 102 aa3.08□□□□□ -1.92
RTN4-213ENST00000485749 DEFB132Q7Z7B7 95 aa3.08□□□□□ -1.92
RTN4-213ENST00000485749 Q8N377 158 aa3.08□□□□□ -1.92
RTN4-213ENST00000485749 SPTSSBQ8NFR3 76 aa3.08□□□□□ -1.92
RTN4-213ENST00000485749 CYP4F30PQ9H0H9 118 aa3.08□□□□□ -1.92
RTN4-213ENST00000485749 GNG13Q9P2W3 67 aa3.08□□□□□ -1.92
RTN4-213ENST00000485749 PLXNB3Q9ULL4 1909 aa3.08□□□□□ -1.92
RTN4-213ENST00000485749 TCF20Q9UGU0 1960 aaKnown RBP3.08□□□□□ -1.92
RTN4-213ENST00000485749 SCN2AQ99250 2005 aa3.08□□□□□ -1.92
RTN4-213ENST00000485749 KIF26AQ9ULI4 1882 aaPredicted RBP3.07□□□□□ -1.92
RTN4-213ENST00000485749 IGKV1D-17A0A075B6S4 117 aa3.07□□□□□ -1.92
RTN4-213ENST00000485749 TRBV10-3A0A0K0K1G6 114 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms