RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 TMEM218A2RU14 115 aa5.81□□□□□ -1.48
SF3A1-208ENST00000485618 LINC00862A6NCI5 91 aa5.81□□□□□ -1.48
SF3A1-208ENST00000485618 F8W036 122 aa5.81□□□□□ -1.48
SF3A1-208ENST00000485618 SRIP30626 198 aa5.81□□□□□ -1.48
SF3A1-208ENST00000485618 CRYBA4P53673 196 aa5.81□□□□□ -1.48
SF3A1-208ENST00000485618 RPL23P62829 140 aaKnown RBP5.81□□□□□ -1.48
SF3A1-208ENST00000485618 FHL2Q14192 279 aa5.81□□□□□ -1.48
SF3A1-208ENST00000485618 RHOHQ15669 191 aa5.81□□□□□ -1.48
SF3A1-208ENST00000485618 TWIST1Q15672 202 aa5.81□□□□□ -1.48
SF3A1-208ENST00000485618 NDUFA5Q16718 116 aa5.81□□□□□ -1.48
SF3A1-208ENST00000485618 RNF212Q495C1 297 aa5.81□□□□□ -1.48
SF3A1-208ENST00000485618 LGALS9CQ6DKI2 356 aa5.81□□□□□ -1.48
SF3A1-208ENST00000485618 LYZL1Q6UWQ5 148 aa5.81□□□□□ -1.48
SF3A1-208ENST00000485618 TSKUQ8WUA8 353 aa5.81□□□□□ -1.48
SF3A1-208ENST00000485618 LINC00476Q8WZB0 136 aa5.81□□□□□ -1.48
SF3A1-208ENST00000485618 ISOC2Q96AB3 205 aa5.81□□□□□ -1.48
SF3A1-208ENST00000485618 ZNF479Q96JC4 524 aa5.81□□□□□ -1.48
SF3A1-208ENST00000485618 APLNQ9ULZ1 77 aa5.81□□□□□ -1.48
SF3A1-208ENST00000485618 ALMS1Q8TCU4 4167 aa5.81□□□□□ -1.48
SF3A1-208ENST00000485618 F5H697 171 aa5.8□□□□□ -1.48
SF3A1-208ENST00000485618 H7C1H1 209 aa5.8□□□□□ -1.48
SF3A1-208ENST00000485618 NXPH4O95158 308 aa5.8□□□□□ -1.48
SF3A1-208ENST00000485618 LY6G6CO95867 125 aa5.8□□□□□ -1.48
SF3A1-208ENST00000485618 S100A8P05109 93 aa5.8□□□□□ -1.48
SF3A1-208ENST00000485618 IGLC6P0CF74 106 aa5.8□□□□□ -1.48
SF3A1-208ENST00000485618 GZMBP10144 247 aa5.8□□□□□ -1.48
SF3A1-208ENST00000485618 GATA1P15976 413 aaPredicted RBP5.8□□□□□ -1.48
SF3A1-208ENST00000485618 HOXA5P20719 270 aa5.8□□□□□ -1.48
SF3A1-208ENST00000485618 FOXA3P55318 350 aaPredicted RBP5.8□□□□□ -1.48
SF3A1-208ENST00000485618 RAB4BP61018 213 aa5.8□□□□□ -1.48
SF3A1-208ENST00000485618 SSTP61278 116 aa5.8□□□□□ -1.48
SF3A1-208ENST00000485618 RIGQ13278 110 aa5.8□□□□□ -1.48
SF3A1-208ENST00000485618 FAM74A4Q5TZK3 123 aa5.8□□□□□ -1.48
SF3A1-208ENST00000485618 OR10AG1Q8NH19 301 aa5.8□□□□□ -1.48
SF3A1-208ENST00000485618 ANAPC16Q96DE5 110 aa5.8□□□□□ -1.48
SF3A1-208ENST00000485618 NAT8BQ9UHF3 227 aa5.8□□□□□ -1.48
SF3A1-208ENST00000485618 IGHV3-73A0A0B4J1V6 119 aa5.79□□□□□ -1.48
SF3A1-208ENST00000485618 TRBV10-1A0A0K0K1A3 114 aa5.79□□□□□ -1.48
SF3A1-208ENST00000485618 A0A1B0GUT8 65 aa5.79□□□□□ -1.48
SF3A1-208ENST00000485618 A0A1B0GW15 77 aa5.79□□□□□ -1.48
SF3A1-208ENST00000485618 GYPEP15421 78 aa5.79□□□□□ -1.48
SF3A1-208ENST00000485618 NTF3P20783 257 aa5.79□□□□□ -1.48
SF3A1-208ENST00000485618 CTRLP40313 264 aa5.79□□□□□ -1.48
SF3A1-208ENST00000485618 NEGR1Q7Z3B1 354 aa5.79□□□□□ -1.48
SF3A1-208ENST00000485618 POM121L12Q8N7R1 296 aa5.79□□□□□ -1.48
SF3A1-208ENST00000485618 SLC25A29Q8N8R3 303 aa5.79□□□□□ -1.48
SF3A1-208ENST00000485618 PGLYRP4Q96LB8 373 aa5.79□□□□□ -1.48
SF3A1-208ENST00000485618 SEC11CQ9BY50 192 aa5.79□□□□□ -1.48
SF3A1-208ENST00000485618 NACAE9PAV3 2078 aa5.79□□□□□ -1.48
SF3A1-208ENST00000485618 A0A087WWL8 130 aa5.78□□□□□ -1.48
SF3A1-208ENST00000485618 MUC21A0A0G2JKD1 596 aa5.78□□□□□ -1.48
SF3A1-208ENST00000485618 MUC21A0A140T8X8 626 aa5.78□□□□□ -1.48
SF3A1-208ENST00000485618 HIGD1CA8MV81 97 aa5.78□□□□□ -1.48
SF3A1-208ENST00000485618 K7EQD1 137 aa5.78□□□□□ -1.48
SF3A1-208ENST00000485618 RPL36AP83881 106 aaKnown RBP5.78□□□□□ -1.48
SF3A1-208ENST00000485618 ZNF56Q15929 161 aa5.78□□□□□ -1.48
SF3A1-208ENST00000485618 ZNF575Q86XF7 245 aa5.78□□□□□ -1.48
SF3A1-208ENST00000485618 C14orf178Q8N769 122 aaPredicted RBP5.78□□□□□ -1.48
SF3A1-208ENST00000485618 FRZBQ92765 325 aa5.78□□□□□ -1.48
SF3A1-208ENST00000485618 RPL36ALQ969Q0 106 aaKnown RBP5.78□□□□□ -1.48
SF3A1-208ENST00000485618 CNFNQ9BYD5 112 aa5.78□□□□□ -1.48
SF3A1-208ENST00000485618 CTDSP1Q9GZU7 261 aa5.78□□□□□ -1.48
SF3A1-208ENST00000485618 DPH3P1Q9H4G8 78 aa5.78□□□□□ -1.48
SF3A1-208ENST00000485618 A0A087WWC5 75 aa5.77□□□□□ -1.49
SF3A1-208ENST00000485618 CRYGDP07320 174 aa5.77□□□□□ -1.49
SF3A1-208ENST00000485618 TIRAPP58753 221 aa5.77□□□□□ -1.49
SF3A1-208ENST00000485618 VSIG2Q96IQ7 327 aa5.77□□□□□ -1.49
SF3A1-208ENST00000485618 TNFRSF18Q9Y5U5 241 aa5.77□□□□□ -1.49
SF3A1-208ENST00000485618 V9GYV3 84 aa5.77□□□□□ -1.49
SF3A1-208ENST00000485618 TRAV9-2A0A087WT02 112 aa5.76□□□□□ -1.49
SF3A1-208ENST00000485618 A0A096LPF7 62 aa5.76□□□□□ -1.49
SF3A1-208ENST00000485618 TRAV8-6A0A0B4J262 113 aa5.76□□□□□ -1.49
SF3A1-208ENST00000485618 SMIM27A0A1W2PRY6 76 aa5.76□□□□□ -1.49
SF3A1-208ENST00000485618 PPP1R17O96001 155 aa5.76□□□□□ -1.49
SF3A1-208ENST00000485618 MGPP08493 103 aa5.76□□□□□ -1.49
SF3A1-208ENST00000485618 S100PP25815 95 aa5.76□□□□□ -1.49
SF3A1-208ENST00000485618 TMEM97Q5BJF2 176 aa5.76□□□□□ -1.49
SF3A1-208ENST00000485618 KCNIP4Q6PIL6 250 aa5.76□□□□□ -1.49
SF3A1-208ENST00000485618 ATP6V0E2Q8NHE4 81 aa5.76□□□□□ -1.49
SF3A1-208ENST00000485618 GTSF1Q8WW33 167 aa5.76□□□□□ -1.49
SF3A1-208ENST00000485618 DNAJC30Q96LL9 226 aa5.76□□□□□ -1.49
SF3A1-208ENST00000485618 IMMP2LQ96T52 175 aa5.76□□□□□ -1.49
SF3A1-208ENST00000485618 SAMD10Q9BYL1 202 aa5.76□□□□□ -1.49
SF3A1-208ENST00000485618 KIAA1109Q2LD37 5005 aa5.75□□□□□ -1.49
SF3A1-208ENST00000485618 ABCA13Q86UQ4 5058 aa5.75□□□□□ -1.49
SF3A1-208ENST00000485618 TRBV7-3A0A075B6L6 115 aa5.75□□□□□ -1.49
SF3A1-208ENST00000485618 K7EP13 123 aa5.75□□□□□ -1.49
SF3A1-208ENST00000485618 RHEBQ15382 184 aa5.75□□□□□ -1.49
SF3A1-208ENST00000485618 UFSP1Q6NVU6 142 aa5.75□□□□□ -1.49
SF3A1-208ENST00000485618 LYPD5Q6UWN5 251 aa5.75□□□□□ -1.49
SF3A1-208ENST00000485618 ATP5L2Q7Z4Y8 100 aa5.75□□□□□ -1.49
SF3A1-208ENST00000485618 SVBPQ8N300 66 aa5.75□□□□□ -1.49
SF3A1-208ENST00000485618 NUP35Q8NFH5 326 aa5.75□□□□□ -1.49
SF3A1-208ENST00000485618 BTF3L4Q96K17 158 aa5.75□□□□□ -1.49
SF3A1-208ENST00000485618 JPT2Q9H910 190 aa5.75□□□□□ -1.49
SF3A1-208ENST00000485618 TMEM242Q9NWH2 141 aa5.75□□□□□ -1.49
SF3A1-208ENST00000485618 FRAS1Q86XX4 4008 aa5.75□□□□□ -1.49
SF3A1-208ENST00000485618 PLECQ15149 4684 aaKnown RBP5.75□□□□□ -1.49
SF3A1-208ENST00000485618 GAGE12JA6NER3 117 aa5.74□□□□□ -1.49
SF3A1-208ENST00000485618 SNAPINO95295 136 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms