RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 XKRY2A2RUG3 117 aa8.24□□□□□ -1.09
APTX-227ENST00000485479 NXPH4O95158 308 aa8.24□□□□□ -1.09
APTX-227ENST00000485479 MED14OSP0DP75 135 aa8.24□□□□□ -1.09
APTX-227ENST00000485479 NTF3P20783 257 aa8.24□□□□□ -1.09
APTX-227ENST00000485479 FOXA3P55318 350 aaPredicted RBP8.24□□□□□ -1.09
APTX-227ENST00000485479 UBE2DNLQ8IWF7 75 aa8.24□□□□□ -1.09
APTX-227ENST00000485479 C15orf53Q8NAA6 179 aa8.24□□□□□ -1.09
APTX-227ENST00000485479 VPS13DQ5THJ4 4388 aa8.24□□□□□ -1.09
APTX-227ENST00000485479 HIGD1CA8MV81 97 aa8.23□□□□□ -1.09
APTX-227ENST00000485479 EVI2AP22794 236 aa8.23□□□□□ -1.09
APTX-227ENST00000485479 ZNF56Q15929 161 aa8.23□□□□□ -1.09
APTX-227ENST00000485479 PTH2Q96A98 100 aa8.23□□□□□ -1.09
APTX-227ENST00000485479 FAM210BQ96KR6 192 aa8.23□□□□□ -1.09
APTX-227ENST00000485479 IGLV2-18A0A075B6J9 118 aa8.22□□□□□ -1.09
APTX-227ENST00000485479 CTRLP40313 264 aa8.22□□□□□ -1.09
APTX-227ENST00000485479 ESRGQ1W209 222 aa8.22□□□□□ -1.09
APTX-227ENST00000485479 C15orf54Q8N8G6 183 aa8.22□□□□□ -1.09
APTX-227ENST00000485479 OR10G8Q8NGN5 311 aa8.22□□□□□ -1.09
APTX-227ENST00000485479 OSTCQ9NRP0 149 aa8.22□□□□□ -1.09
APTX-227ENST00000485479 LINC00588Q9Y4M8 146 aa8.22□□□□□ -1.09
APTX-227ENST00000485479 A8MWL6 223 aa8.22□□□□□ -1.09
APTX-227ENST00000485479 F8W036 122 aa8.22□□□□□ -1.09
APTX-227ENST00000485479 MGPP08493 103 aa8.22□□□□□ -1.09
APTX-227ENST00000485479 TCTAP57738 103 aa8.22□□□□□ -1.09
APTX-227ENST00000485479 TWIST1Q15672 202 aa8.22□□□□□ -1.09
APTX-227ENST00000485479 LGALS9CQ6DKI2 356 aa8.22□□□□□ -1.09
APTX-227ENST00000485479 ICOSQ9Y6W8 199 aa8.22□□□□□ -1.09
APTX-227ENST00000485479 TMEM218A2RU14 115 aa8.21□□□□□ -1.09
APTX-227ENST00000485479 LINC00862A6NCI5 91 aa8.21□□□□□ -1.09
APTX-227ENST00000485479 GAGE12JA6NER3 117 aa8.21□□□□□ -1.09
APTX-227ENST00000485479 F5H697 171 aa8.21□□□□□ -1.09
APTX-227ENST00000485479 GAGE1Q13065 139 aa8.21□□□□□ -1.09
APTX-227ENST00000485479 GAGE4Q13068 117 aa8.21□□□□□ -1.09
APTX-227ENST00000485479 GAGE5Q13069 117 aa8.21□□□□□ -1.09
APTX-227ENST00000485479 GAGE13Q4V321 117 aa8.21□□□□□ -1.09
APTX-227ENST00000485479 TSKUQ8WUA8 353 aa8.21□□□□□ -1.09
APTX-227ENST00000485479 AP1S3Q96PC3 154 aa8.21□□□□□ -1.09
APTX-227ENST00000485479 A0A1W2PPQ1 181 aa8.21□□□□□ -1.1
APTX-227ENST00000485479 M0R2N4 97 aa8.21□□□□□ -1.1
APTX-227ENST00000485479 SRIP30626 198 aa8.21□□□□□ -1.1
APTX-227ENST00000485479 F2Z2F3 143 aa8.2□□□□□ -1.1
APTX-227ENST00000485479 RHOHQ15669 191 aa8.2□□□□□ -1.1
APTX-227ENST00000485479 RNF212Q495C1 297 aa8.2□□□□□ -1.1
APTX-227ENST00000485479 PIK3CD-AS1Q5SR53 167 aa8.2□□□□□ -1.1
APTX-227ENST00000485479 UQCC3Q6UW78 93 aa8.2□□□□□ -1.1
APTX-227ENST00000485479 ZFP2Q6ZN57 461 aa8.2□□□□□ -1.1
APTX-227ENST00000485479 KIF25-AS1Q9Y6Z4 181 aa8.2□□□□□ -1.1
APTX-227ENST00000485479 TRAV26-2A0A0B4J265 109 aa8.19□□□□□ -1.1
APTX-227ENST00000485479 TRBV6-4A0A1B0GX49 114 aa8.19□□□□□ -1.1
APTX-227ENST00000485479 H3BNG1 76 aa8.19□□□□□ -1.1
APTX-227ENST00000485479 RHODO00212 210 aa8.19□□□□□ -1.1
APTX-227ENST00000485479 SMIM17P0DL12 118 aa8.19□□□□□ -1.1
APTX-227ENST00000485479 LINC00315P59091 139 aa8.19□□□□□ -1.1
APTX-227ENST00000485479 SLAQ13239 276 aa8.19□□□□□ -1.1
APTX-227ENST00000485479 CT83Q5H943 113 aa8.19□□□□□ -1.1
APTX-227ENST00000485479 NUP35Q8NFH5 326 aa8.19□□□□□ -1.1
APTX-227ENST00000485479 DEFB104AQ8WTQ1 72 aa8.19□□□□□ -1.1
APTX-227ENST00000485479 PRADC1Q9BSG0 188 aa8.19□□□□□ -1.1
APTX-227ENST00000485479 CCL18P55774 89 aa8.19□□□□□ -1.1
APTX-227ENST00000485479 CACNG7P62955 275 aa8.19□□□□□ -1.1
APTX-227ENST00000485479 MRPL23Q16540 153 aaKnown RBP8.19□□□□□ -1.1
APTX-227ENST00000485479 NEGR1Q7Z3B1 354 aa8.18□□□□□ -1.1
APTX-227ENST00000485479 CNFNQ9BYD5 112 aa8.18□□□□□ -1.1
APTX-227ENST00000485479 FRAS1Q86XX4 4008 aa8.18□□□□□ -1.1
APTX-227ENST00000485479 IGHV3-38A0A0C4DH36 116 aa8.17□□□□□ -1.1
APTX-227ENST00000485479 SUMO4Q6EEV6 95 aa8.17□□□□□ -1.1
APTX-227ENST00000485479 LYPD5Q6UWN5 251 aa8.17□□□□□ -1.1
APTX-227ENST00000485479 ZNRF2Q8NHG8 242 aa8.17□□□□□ -1.1
APTX-227ENST00000485479 FAM3BP58499 235 aaPredicted RBP8.17□□□□□ -1.1
APTX-227ENST00000485479 MRPL54Q6P161 138 aaKnown RBP8.17□□□□□ -1.1
APTX-227ENST00000485479 SLC7A5P1Q8MH63 180 aa8.17□□□□□ -1.1
APTX-227ENST00000485479 A0A1B0GUT8 65 aa8.16□□□□□ -1.1
APTX-227ENST00000485479 SMIM27A0A1W2PRY6 76 aa8.16□□□□□ -1.1
APTX-227ENST00000485479 GAS8-AS1O95177 125 aa8.16□□□□□ -1.1
APTX-227ENST00000485479 TRGC1P0CF51 173 aa8.16□□□□□ -1.1
APTX-227ENST00000485479 WFDC10BQ8IUB3 73 aa8.16□□□□□ -1.1
APTX-227ENST00000485479 NEXN-AS1Q8NBZ9 246 aa8.16□□□□□ -1.1
APTX-227ENST00000485479 GFRA4Q9GZZ7 299 aa8.16□□□□□ -1.1
APTX-227ENST00000485479 DPH3P1Q9H4G8 78 aa8.16□□□□□ -1.1
APTX-227ENST00000485479 NAT8BQ9UHF3 227 aa8.16□□□□□ -1.1
APTX-227ENST00000485479 CAMPP49913 170 aa8.15□□□□□ -1.1
APTX-227ENST00000485479 RAB4BP61018 213 aa8.15□□□□□ -1.1
APTX-227ENST00000485479 PNRC1Q12796 327 aaPredicted RBP8.15□□□□□ -1.1
APTX-227ENST00000485479 BORCS7Q96B45 105 aa8.15□□□□□ -1.1
APTX-227ENST00000485479 SEC11CQ9BY50 192 aa8.15□□□□□ -1.1
APTX-227ENST00000485479 CIDEAO60543 219 aa8.15□□□□□ -1.11
APTX-227ENST00000485479 LINC00694P0DN24 101 aa8.15□□□□□ -1.11
APTX-227ENST00000485479 AMN1Q8IY45 258 aa8.15□□□□□ -1.11
APTX-227ENST00000485479 Q8N3U1 123 aa8.15□□□□□ -1.11
APTX-227ENST00000485479 ATP6V0E2Q8NHE4 81 aa8.15□□□□□ -1.11
APTX-227ENST00000485479 RPL39LQ96EH5 51 aaKnown RBP8.14□□□□□ -1.11
APTX-227ENST00000485479 KRTAP1-5Q9BYS1 174 aa8.14□□□□□ -1.11
APTX-227ENST00000485479 Q9H8V8 135 aa8.14□□□□□ -1.11
APTX-227ENST00000485479 DNAH10Q8IVF4 4471 aa8.14□□□□□ -1.11
APTX-227ENST00000485479 DNAH2Q9P225 4427 aa8.13□□□□□ -1.11
APTX-227ENST00000485479 M0QY20 66 aa8.13□□□□□ -1.11
APTX-227ENST00000485479 GATD1Q8NB37 220 aa8.13□□□□□ -1.11
APTX-227ENST00000485479 MRPS16Q9Y3D3 137 aaKnown RBP8.13□□□□□ -1.11
APTX-227ENST00000485479 FAM231BA6NCW3 169 aa8.13□□□□□ -1.11
APTX-227ENST00000485479 SMKR1H3BMG3 65 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms