RNA–Protein interactions for RNA: ENST00000485303.5

NECTIN3-206, Transcript of nectin cell adhesion molecule 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NECTIN3, Length 3,664 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-206ENST00000485303 LINC00614P0C842 121 aa13.63□□□□□ -0.23
NECTIN3-206ENST00000485303 MRPL16Q9NX20 251 aaKnown RBP13.62□□□□□ -0.23
NECTIN3-206ENST00000485303 COTL1Q14019 142 aa13.62□□□□□ -0.23
NECTIN3-206ENST00000485303 GOLT1BQ9Y3E0 138 aa13.62□□□□□ -0.23
NECTIN3-206ENST00000485303 NOTCH1P46531 2555 aa13.62□□□□□ -0.23
NECTIN3-206ENST00000485303 SNAI2O43623 268 aa13.62□□□□□ -0.23
NECTIN3-206ENST00000485303 ZNF415Q09FC8 603 aa13.62□□□□□ -0.23
NECTIN3-206ENST00000485303 TRPT1Q86TN4 253 aaKnown RBP13.62□□□□□ -0.23
NECTIN3-206ENST00000485303 ZNF664Q8N3J9 261 aa13.62□□□□□ -0.23
NECTIN3-206ENST00000485303 TNFRSF6BO95407 300 aa13.61□□□□□ -0.23
NECTIN3-206ENST00000485303 COA6Q5JTJ3 125 aaKnown RBP13.61□□□□□ -0.23
NECTIN3-206ENST00000485303 ZNF493Q6ZR52 646 aa13.61□□□□□ -0.23
NECTIN3-206ENST00000485303 TRGV1A0A0A0MS02 117 aa13.61□□□□□ -0.23
NECTIN3-206ENST00000485303 IGHV3-53P01767 116 aa13.61□□□□□ -0.23
NECTIN3-206ENST00000485303 INSL3P51460 131 aa13.6□□□□□ -0.23
NECTIN3-206ENST00000485303 LINC00310P59036 64 aa13.6□□□□□ -0.23
NECTIN3-206ENST00000485303 MCRIP2Q9BUT9 160 aaKnown RBP13.6□□□□□ -0.23
NECTIN3-206ENST00000485303 EREGO14944 169 aa13.59□□□□□ -0.23
NECTIN3-206ENST00000485303 AZU1P20160 251 aa13.59□□□□□ -0.23
NECTIN3-206ENST00000485303 OR2K2Q8NGT1 345 aa13.59□□□□□ -0.23
NECTIN3-206ENST00000485303 RNF185Q96GF1 192 aa13.59□□□□□ -0.23
NECTIN3-206ENST00000485303 MUC4Q99102 2169 aa13.59□□□□□ -0.23
NECTIN3-206ENST00000485303 TMEM158Q8WZ71 300 aa13.59□□□□□ -0.23
NECTIN3-206ENST00000485303 RPL39LQ96EH5 51 aaKnown RBP13.59□□□□□ -0.23
NECTIN3-206ENST00000485303 RIPPLY3P57055 190 aa13.58□□□□□ -0.24
NECTIN3-206ENST00000485303 BEAN1Q3B7T3 259 aa13.58□□□□□ -0.24
NECTIN3-206ENST00000485303 NEGR1Q7Z3B1 354 aa13.58□□□□□ -0.24
NECTIN3-206ENST00000485303 CNFNQ9BYD5 112 aa13.58□□□□□ -0.24
NECTIN3-206ENST00000485303 PPBPP02775 128 aa13.58□□□□□ -0.24
NECTIN3-206ENST00000485303 RRN3P1Q2M238 152 aa13.57□□□□□ -0.24
NECTIN3-206ENST00000485303 TDRG1Q3Y452 100 aa13.57□□□□□ -0.24
NECTIN3-206ENST00000485303 C18orf15Q96N68 181 aa13.57□□□□□ -0.24
NECTIN3-206ENST00000485303 C1QTNF4Q9BXJ3 329 aa13.57□□□□□ -0.24
NECTIN3-206ENST00000485303 LEPROTL1O95214 131 aa13.57□□□□□ -0.24
NECTIN3-206ENST00000485303 JOSD1Q15040 202 aaPredicted RBP13.57□□□□□ -0.24
NECTIN3-206ENST00000485303 C1orf158Q8N1D5 194 aa13.56□□□□□ -0.24
NECTIN3-206ENST00000485303 CSTL1Q9H114 145 aa13.56□□□□□ -0.24
NECTIN3-206ENST00000485303 SHISA2Q6UWI4 295 aa13.55□□□□□ -0.24
NECTIN3-206ENST00000485303 MGAM2Q2M2H8 2515 aa13.55□□□□□ -0.24
NECTIN3-206ENST00000485303 FBN1P35555 2871 aaKnown RBP13.55□□□□□ -0.24
NECTIN3-206ENST00000485303 NOP10Q9NPE3 64 aaKnown RBP13.55□□□□□ -0.24
NECTIN3-206ENST00000485303 Q6ZWC4 215 aa13.55□□□□□ -0.24
NECTIN3-206ENST00000485303 ATOH7Q8N100 152 aa13.55□□□□□ -0.24
NECTIN3-206ENST00000485303 M0R143 59 aa13.54□□□□□ -0.24
NECTIN3-206ENST00000485303 TRGV2A0A075B6R0 118 aa13.54□□□□□ -0.24
NECTIN3-206ENST00000485303 DEFB135Q30KP9 77 aa13.54□□□□□ -0.24
NECTIN3-206ENST00000485303 MED14OSP0DP75 135 aa13.54□□□□□ -0.24
NECTIN3-206ENST00000485303 IGHV1-24A0A0C4DH33 117 aa13.53□□□□□ -0.24
NECTIN3-206ENST00000485303 TRRAPQ9Y4A5 3859 aa13.53□□□□□ -0.24
NECTIN3-206ENST00000485303 M0R2P5 195 aa13.53□□□□□ -0.24
NECTIN3-206ENST00000485303 NPSP0C0P6 89 aa13.53□□□□□ -0.24
NECTIN3-206ENST00000485303 C9orf85Q96MD7 179 aa13.53□□□□□ -0.24
NECTIN3-206ENST00000485303 PMCHL2Q9BQD1 86 aa13.53□□□□□ -0.24
NECTIN3-206ENST00000485303 NDUFAF3Q9BU61 184 aa13.53□□□□□ -0.24
NECTIN3-206ENST00000485303 GAGE12BA1L429 117 aa13.52□□□□□ -0.24
NECTIN3-206ENST00000485303 DEFB4AO15263 64 aa13.52□□□□□ -0.24
NECTIN3-206ENST00000485303 GAGE7O76087 117 aa13.52□□□□□ -0.24
NECTIN3-206ENST00000485303 GAGE12FP0CL80 117 aa13.52□□□□□ -0.24
NECTIN3-206ENST00000485303 GAGE12GP0CL81 117 aa13.52□□□□□ -0.24
NECTIN3-206ENST00000485303 GAGE12IP0CL82 117 aa13.52□□□□□ -0.24
NECTIN3-206ENST00000485303 LINC00173Q6ZV60 143 aa13.52□□□□□ -0.24
NECTIN3-206ENST00000485303 GATD1Q8NB37 220 aa13.52□□□□□ -0.24
NECTIN3-206ENST00000485303 ZNF747Q9BV97 191 aa13.52□□□□□ -0.24
NECTIN3-206ENST00000485303 SCRT2Q9NQ03 307 aa13.52□□□□□ -0.24
NECTIN3-206ENST00000485303 C19orf73Q9NVV2 129 aa13.52□□□□□ -0.24
NECTIN3-206ENST00000485303 SUMO4Q6EEV6 95 aa13.52□□□□□ -0.25
NECTIN3-206ENST00000485303 CHCHD1Q96BP2 118 aaKnown RBP13.52□□□□□ -0.25
NECTIN3-206ENST00000485303 URB1-AS1Q96HZ7 61 aa13.52□□□□□ -0.25
NECTIN3-206ENST00000485303 DEFB130BP0DP73 79 aa13.51□□□□□ -0.25
NECTIN3-206ENST00000485303 DEFB130AP0DP74 79 aa13.51□□□□□ -0.25
NECTIN3-206ENST00000485303 NUDT3O95989 172 aa13.51□□□□□ -0.25
NECTIN3-206ENST00000485303 MRAP2Q96G30 205 aa13.51□□□□□ -0.25
NECTIN3-206ENST00000485303 VAMP8Q9BV40 100 aa13.51□□□□□ -0.25
NECTIN3-206ENST00000485303 IGHV4-4A0A075B6R2 117 aa13.5□□□□□ -0.25
NECTIN3-206ENST00000485303 OR4C5Q8NGB2 326 aa13.5□□□□□ -0.25
NECTIN3-206ENST00000485303 ST20Q9HBF5 79 aa13.5□□□□□ -0.25
NECTIN3-206ENST00000485303 C3orf79P0CE67 100 aa13.5□□□□□ -0.25
NECTIN3-206ENST00000485303 SUMO2P61956 95 aaKnown RBP13.5□□□□□ -0.25
NECTIN3-206ENST00000485303 Q6ZTI0 123 aa13.5□□□□□ -0.25
NECTIN3-206ENST00000485303 PRB2P02812 416 aaPredicted RBP13.49□□□□□ -0.25
NECTIN3-206ENST00000485303 P0DMU3 169 aa13.49□□□□□ -0.25
NECTIN3-206ENST00000485303 FAM231AP0DMU4 169 aa13.49□□□□□ -0.25
NECTIN3-206ENST00000485303 FAM231CP0DMU5 169 aa13.49□□□□□ -0.25
NECTIN3-206ENST00000485303 NXT2Q9NPJ8 142 aaKnown RBP13.49□□□□□ -0.25
NECTIN3-206ENST00000485303 MORN3Q6PF18 240 aaPredicted RBP13.49□□□□□ -0.25
NECTIN3-206ENST00000485303 ERASQ7Z444 233 aa13.49□□□□□ -0.25
NECTIN3-206ENST00000485303 FCER1GP30273 86 aa13.49□□□□□ -0.25
NECTIN3-206ENST00000485303 TCTAP57738 103 aa13.48□□□□□ -0.25
NECTIN3-206ENST00000485303 RASL10AQ92737 203 aa13.48□□□□□ -0.25
NECTIN3-206ENST00000485303 C20orf144Q9BQM9 153 aa13.48□□□□□ -0.25
NECTIN3-206ENST00000485303 MAP1LC3CQ9BXW4 147 aa13.48□□□□□ -0.25
NECTIN3-206ENST00000485303 SNHG12Q9BXW3 62 aa13.48□□□□□ -0.25
NECTIN3-206ENST00000485303 A8MTW9 85 aa13.47□□□□□ -0.25
NECTIN3-206ENST00000485303 HSPB8Q9UJY1 196 aa13.47□□□□□ -0.25
NECTIN3-206ENST00000485303 PRSS1P07477 247 aa13.47□□□□□ -0.25
NECTIN3-206ENST00000485303 U3KQK5 164 aa13.47□□□□□ -0.25
NECTIN3-206ENST00000485303 HBDP02042 147 aa13.46□□□□□ -0.25
NECTIN3-206ENST00000485303 TMEM263Q8WUH6 116 aaKnown RBP13.46□□□□□ -0.25
NECTIN3-206ENST00000485303 SPXQ9BT56 116 aa13.46□□□□□ -0.25
NECTIN3-206ENST00000485303 SMIM2Q9BVW6 85 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms