RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 TRAV9-1A0A075B6T8 112 aa3.79□□□□□ -1.8
CCDC39-205ENST00000485055 M0R378 163 aa3.79□□□□□ -1.8
CCDC39-205ENST00000485055 SCGB1C2P0DMR2 95 aa3.79□□□□□ -1.8
CCDC39-205ENST00000485055 TAS2R19P59542 299 aa3.79□□□□□ -1.8
CCDC39-205ENST00000485055 CEMP1Q6PRD7 247 aaPredicted RBP3.79□□□□□ -1.8
CCDC39-205ENST00000485055 ALKAL2Q6UX46 152 aa3.79□□□□□ -1.8
CCDC39-205ENST00000485055 NOTCH2NLQ7Z3S9 236 aa3.79□□□□□ -1.8
CCDC39-205ENST00000485055 LINC00305Q7Z4B0 112 aa3.79□□□□□ -1.8
CCDC39-205ENST00000485055 OR51H1Q8NH63 302 aa3.79□□□□□ -1.8
CCDC39-205ENST00000485055 SCGB1C1Q8TD33 95 aa3.79□□□□□ -1.8
CCDC39-205ENST00000485055 A8MWV9 139 aa3.79□□□□□ -1.8
CCDC39-205ENST00000485055 TMEM250H0YL14 139 aa3.79□□□□□ -1.8
CCDC39-205ENST00000485055 K7ERJ3 54 aa3.79□□□□□ -1.8
CCDC39-205ENST00000485055 BMPR1BO00238 502 aa3.79□□□□□ -1.8
CCDC39-205ENST00000485055 SEC11BP0C7V7 166 aa3.79□□□□□ -1.8
CCDC39-205ENST00000485055 SAA1P0DJI8 122 aaPredicted RBP3.79□□□□□ -1.8
CCDC39-205ENST00000485055 SYNJ2BPP57105 145 aa3.79□□□□□ -1.8
CCDC39-205ENST00000485055 DEFA5Q01523 94 aa3.79□□□□□ -1.8
CCDC39-205ENST00000485055 GTSCR1Q86UQ5 136 aa3.79□□□□□ -1.8
CCDC39-205ENST00000485055 TMEM252Q8N6L7 170 aa3.79□□□□□ -1.8
CCDC39-205ENST00000485055 NKAPP1Q8N9T2 125 aa3.79□□□□□ -1.8
CCDC39-205ENST00000485055 ATG5Q9H1Y0 275 aa3.79□□□□□ -1.8
CCDC39-205ENST00000485055 NDUFA4L2Q9NRX3 87 aa3.79□□□□□ -1.8
CCDC39-205ENST00000485055 TMEM14BQ9NUH8 114 aa3.79□□□□□ -1.8
CCDC39-205ENST00000485055 MGAM2Q2M2H8 2515 aa3.79□□□□□ -1.8
CCDC39-205ENST00000485055 IGLC7A0M8Q6 106 aa3.78□□□□□ -1.8
CCDC39-205ENST00000485055 LCE2BO14633 110 aa3.78□□□□□ -1.8
CCDC39-205ENST00000485055 GABARAPO95166 117 aa3.78□□□□□ -1.8
CCDC39-205ENST00000485055 PPYP01298 95 aa3.78□□□□□ -1.8
CCDC39-205ENST00000485055 TRGV3P03979 118 aa3.78□□□□□ -1.8
CCDC39-205ENST00000485055 RPL30P62888 115 aaKnown RBP3.78□□□□□ -1.8
CCDC39-205ENST00000485055 ATP5G2Q06055 141 aa3.78□□□□□ -1.8
CCDC39-205ENST00000485055 S100A16Q96FQ6 103 aaKnown RBP3.78□□□□□ -1.8
CCDC39-205ENST00000485055 CYYR1Q96J86 154 aa3.78□□□□□ -1.8
CCDC39-205ENST00000485055 SEC11CQ9BY50 192 aa3.78□□□□□ -1.8
CCDC39-205ENST00000485055 TAS2R8Q9NYW2 309 aa3.78□□□□□ -1.8
CCDC39-205ENST00000485055 PIGBOS1A0A0B4J2F0 54 aa3.78□□□□□ -1.8
CCDC39-205ENST00000485055 PLA2G10O15496 165 aa3.78□□□□□ -1.8
CCDC39-205ENST00000485055 CHTF8P0CG12 524 aa3.78□□□□□ -1.8
CCDC39-205ENST00000485055 DEFB114Q30KQ6 69 aa3.78□□□□□ -1.8
CCDC39-205ENST00000485055 MRPL54Q6P161 138 aaKnown RBP3.78□□□□□ -1.8
CCDC39-205ENST00000485055 NFE4Q86UQ8 179 aa3.78□□□□□ -1.8
CCDC39-205ENST00000485055 PCP2Q8IVA1 136 aa3.78□□□□□ -1.8
CCDC39-205ENST00000485055 MIEN1Q9BRT3 115 aa3.78□□□□□ -1.8
CCDC39-205ENST00000485055 IMUPQ9GZP8 106 aa3.78□□□□□ -1.8
CCDC39-205ENST00000485055 IGHV3-7P01780 117 aa3.77□□□□□ -1.81
CCDC39-205ENST00000485055 PRSS1P07477 247 aa3.77□□□□□ -1.81
CCDC39-205ENST00000485055 TGFBR1P36897 503 aa3.77□□□□□ -1.81
CCDC39-205ENST00000485055 TMBIM6P55061 237 aa3.77□□□□□ -1.81
CCDC39-205ENST00000485055 TDRG1Q3Y452 100 aa3.77□□□□□ -1.81
CCDC39-205ENST00000485055 C10orf25Q5T742 122 aa3.77□□□□□ -1.81
CCDC39-205ENST00000485055 YPEL4Q96NS1 127 aa3.77□□□□□ -1.81
CCDC39-205ENST00000485055 SLC25A2Q9BXI2 301 aa3.77□□□□□ -1.81
CCDC39-205ENST00000485055 ZNF492Q9P255 531 aa3.77□□□□□ -1.81
CCDC39-205ENST00000485055 TRBV20-1A0A075B6N2 111 aa3.77□□□□□ -1.81
CCDC39-205ENST00000485055 ZNF705GA8MUZ8 300 aaPredicted RBP3.77□□□□□ -1.81
CCDC39-205ENST00000485055 H3BMG7 143 aa3.77□□□□□ -1.81
CCDC39-205ENST00000485055 TMEM256-PLSCR3K7ERE1 68 aa3.77□□□□□ -1.81
CCDC39-205ENST00000485055 NDUFA4O00483 81 aa3.77□□□□□ -1.81
CCDC39-205ENST00000485055 IGLC1P0CG04 106 aa3.77□□□□□ -1.81
CCDC39-205ENST00000485055 IFITM1P13164 125 aa3.77□□□□□ -1.81
CCDC39-205ENST00000485055 RPL27AP46776 148 aaKnown RBP3.77□□□□□ -1.81
CCDC39-205ENST00000485055 FXYD6Q9H0Q3 95 aa3.77□□□□□ -1.81
CCDC39-205ENST00000485055 IGLV5-39A0A0G2JS06 123 aa3.77□□□□□ -1.81
CCDC39-205ENST00000485055 OR2T8A6NH00 312 aa3.77□□□□□ -1.81
CCDC39-205ENST00000485055 IGLL5B9A064 214 aa3.77□□□□□ -1.81
CCDC39-205ENST00000485055 ZNF705DP0CH99 300 aaPredicted RBP3.77□□□□□ -1.81
CCDC39-205ENST00000485055 Q6AWC8 147 aa3.77□□□□□ -1.81
CCDC39-205ENST00000485055 VAMP8Q9BV40 100 aa3.77□□□□□ -1.81
CCDC39-205ENST00000485055 TRAV9-2A0A087WT02 112 aa3.76□□□□□ -1.81
CCDC39-205ENST00000485055 C2orf70A6NJV1 201 aa3.76□□□□□ -1.81
CCDC39-205ENST00000485055 KRASP01116 189 aa3.76□□□□□ -1.81
CCDC39-205ENST00000485055 MT-ND6P03923 174 aa3.76□□□□□ -1.81
CCDC39-205ENST00000485055 MT-ATP8P03928 68 aa3.76□□□□□ -1.81
CCDC39-205ENST00000485055 TRAPPC2P0DI81 140 aa3.76□□□□□ -1.81
CCDC39-205ENST00000485055 TRAPPC2BP0DI82 140 aa3.76□□□□□ -1.81
CCDC39-205ENST00000485055 NMUP48645 174 aa3.76□□□□□ -1.81
CCDC39-205ENST00000485055 ADAMTSL4-AS1Q5T5F5 129 aa3.76□□□□□ -1.81
CCDC39-205ENST00000485055 C10orf126Q8N4M7 172 aa3.76□□□□□ -1.81
CCDC39-205ENST00000485055 UBALD1Q8TB05 177 aa3.76□□□□□ -1.81
CCDC39-205ENST00000485055 TMEM191AQ9H0A3 160 aa3.76□□□□□ -1.81
CCDC39-205ENST00000485055 TMEM235A6NFC5 223 aa3.76□□□□□ -1.81
CCDC39-205ENST00000485055 IGHV3-48P01763 117 aa3.76□□□□□ -1.81
CCDC39-205ENST00000485055 AKR1C1Q04828 323 aa3.76□□□□□ -1.81
CCDC39-205ENST00000485055 PLGLAQ15195 96 aa3.76□□□□□ -1.81
CCDC39-205ENST00000485055 DEFB136Q30KP8 78 aa3.76□□□□□ -1.81
CCDC39-205ENST00000485055 AADACL3Q5VUY0 350 aa3.76□□□□□ -1.81
CCDC39-205ENST00000485055 SLC25A34Q6PIV7 304 aa3.76□□□□□ -1.81
CCDC39-205ENST00000485055 ZNF818PQ6ZRF7 136 aa3.76□□□□□ -1.81
CCDC39-205ENST00000485055 LCA10Q71F78 164 aa3.76□□□□□ -1.81
CCDC39-205ENST00000485055 SBSPONQ8IVN8 264 aa3.76□□□□□ -1.81
CCDC39-205ENST00000485055 MUC7Q8TAX7 377 aa3.76□□□□□ -1.81
CCDC39-205ENST00000485055 TMEM190Q8WZ59 177 aa3.76□□□□□ -1.81
CCDC39-205ENST00000485055 LSM10Q969L4 123 aaKnown RBP3.76□□□□□ -1.81
CCDC39-205ENST00000485055 MRPL32Q9BYC8 188 aaKnown RBP3.76□□□□□ -1.81
CCDC39-205ENST00000485055 C21orf62Q9NYP8 219 aa3.76□□□□□ -1.81
CCDC39-205ENST00000485055 IGHV4-4A0A075B6R2 117 aa3.75□□□□□ -1.81
CCDC39-205ENST00000485055 TRBV7-6A0A0J9YX20 115 aa3.75□□□□□ -1.81
CCDC39-205ENST00000485055 LCE6AA0A183 80 aa3.75□□□□□ -1.81
CCDC39-205ENST00000485055 UBE2L6O14933 153 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms