RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 GAGE1Q13065 139 aa8.72□□□□□ -1.01
HDAC1-209ENST00000484305 GAGE4Q13068 117 aa8.72□□□□□ -1.01
HDAC1-209ENST00000484305 GAGE5Q13069 117 aa8.72□□□□□ -1.01
HDAC1-209ENST00000484305 GAGE13Q4V321 117 aa8.72□□□□□ -1.01
HDAC1-209ENST00000484305 OR10J3Q5JRS4 329 aa8.72□□□□□ -1.01
HDAC1-209ENST00000484305 FAM74A4Q5TZK3 123 aa8.72□□□□□ -1.01
HDAC1-209ENST00000484305 ZFP82Q8N141 532 aa8.72□□□□□ -1.01
HDAC1-209ENST00000484305 C9orf62Q8N4C0 152 aa8.72□□□□□ -1.01
HDAC1-209ENST00000484305 GTSF1LQ9H1H1 148 aa8.72□□□□□ -1.01
HDAC1-209ENST00000484305 TRAV8-6A0A0B4J262 113 aa8.71□□□□□ -1.02
HDAC1-209ENST00000484305 RHODO00212 210 aa8.71□□□□□ -1.02
HDAC1-209ENST00000484305 IGLV2-8P01709 118 aa8.71□□□□□ -1.02
HDAC1-209ENST00000484305 MEF2BQ02080 365 aaPredicted RBP8.71□□□□□ -1.02
HDAC1-209ENST00000484305 LELP1Q5T871 98 aa8.71□□□□□ -1.02
HDAC1-209ENST00000484305 NFE4Q86UQ8 179 aa8.71□□□□□ -1.02
HDAC1-209ENST00000484305 OR10AG1Q8NH19 301 aa8.71□□□□□ -1.02
HDAC1-209ENST00000484305 RAB19A4D1S5 217 aa8.7□□□□□ -1.02
HDAC1-209ENST00000484305 CENPWQ5EE01 88 aa8.7□□□□□ -1.02
HDAC1-209ENST00000484305 LINC01556Q5JQF7 62 aa8.7□□□□□ -1.02
HDAC1-209ENST00000484305 C10orf126Q8N4M7 172 aa8.7□□□□□ -1.02
HDAC1-209ENST00000484305 MUC21A0A0G2JKD1 596 aa8.69□□□□□ -1.02
HDAC1-209ENST00000484305 MUC21A0A140T8X8 626 aa8.69□□□□□ -1.02
HDAC1-209ENST00000484305 IGHV3-30P01768 117 aa8.69□□□□□ -1.02
HDAC1-209ENST00000484305 IGHV3-33P01772 117 aa8.69□□□□□ -1.02
HDAC1-209ENST00000484305 CXCL1P09341 107 aa8.69□□□□□ -1.02
HDAC1-209ENST00000484305 IGHV3-30-3P0DP02 117 aa8.69□□□□□ -1.02
HDAC1-209ENST00000484305 IGHV3-30-5P0DP03 117 aa8.69□□□□□ -1.02
HDAC1-209ENST00000484305 SSBP4Q9BWG4 385 aaPredicted RBP8.69□□□□□ -1.02
HDAC1-209ENST00000484305 TRBV20OR9-2A0A075B6H5 130 aa8.68□□□□□ -1.02
HDAC1-209ENST00000484305 SNAI2O43623 268 aa8.68□□□□□ -1.02
HDAC1-209ENST00000484305 PDE6DO43924 150 aa8.68□□□□□ -1.02
HDAC1-209ENST00000484305 IFNA1P01562 189 aa8.68□□□□□ -1.02
HDAC1-209ENST00000484305 OR5AL1P0C617 328 aa8.68□□□□□ -1.02
HDAC1-209ENST00000484305 BCL2P10415 239 aa8.68□□□□□ -1.02
HDAC1-209ENST00000484305 GNG4P50150 75 aa8.68□□□□□ -1.02
HDAC1-209ENST00000484305 Q8N3U1 123 aa8.68□□□□□ -1.02
HDAC1-209ENST00000484305 MED9Q9NWA0 146 aa8.68□□□□□ -1.02
HDAC1-209ENST00000484305 RYR1P21817 5038 aa8.68□□□□□ -1.02
HDAC1-209ENST00000484305 LRP1BQ9NZR2 4599 aa8.68□□□□□ -1.02
HDAC1-209ENST00000484305 A0A1B0GVG6 124 aa8.67□□□□□ -1.02
HDAC1-209ENST00000484305 IBA57-AS1B1ANH7 110 aa8.67□□□□□ -1.02
HDAC1-209ENST00000484305 FUSP35637 526 aaKnown RBP eCLIP8.67□□□□□ -1.02
HDAC1-209ENST00000484305 ERVFC1-1P60608 527 aa8.67□□□□□ -1.02
HDAC1-209ENST00000484305 SSTP61278 116 aa8.67□□□□□ -1.02
HDAC1-209ENST00000484305 ALKAL2Q6UX46 152 aa8.67□□□□□ -1.02
HDAC1-209ENST00000484305 VAX2Q9UIW0 290 aa8.67□□□□□ -1.02
HDAC1-209ENST00000484305 A0A087WTM6 91 aa8.66□□□□□ -1.02
HDAC1-209ENST00000484305 C19orf71A6NCJ1 209 aa8.66□□□□□ -1.02
HDAC1-209ENST00000484305 GZMBP10144 247 aa8.66□□□□□ -1.02
HDAC1-209ENST00000484305 SPANXN1Q5VSR9 72 aa8.66□□□□□ -1.02
HDAC1-209ENST00000484305 DAZAP1Q96EP5 407 aaKnown RBP8.66□□□□□ -1.02
HDAC1-209ENST00000484305 KRTAP17-1Q9BYP8 105 aa8.66□□□□□ -1.02
HDAC1-209ENST00000484305 DNAH5Q8TE73 4624 aa8.65□□□□□ -1.02
HDAC1-209ENST00000484305 A0A087WWC5 75 aa8.65□□□□□ -1.02
HDAC1-209ENST00000484305 TRBV10-1A0A0K0K1A3 114 aa8.65□□□□□ -1.02
HDAC1-209ENST00000484305 EREGO14944 169 aa8.65□□□□□ -1.02
HDAC1-209ENST00000484305 CDK2AP2O75956 126 aa8.65□□□□□ -1.02
HDAC1-209ENST00000484305 NKX2-5P52952 324 aaPredicted RBP8.65□□□□□ -1.02
HDAC1-209ENST00000484305 RAB4BP61018 213 aa8.65□□□□□ -1.02
HDAC1-209ENST00000484305 ZNF56Q15929 161 aa8.65□□□□□ -1.02
HDAC1-209ENST00000484305 OR2D3Q8NGH3 330 aa8.65□□□□□ -1.02
HDAC1-209ENST00000484305 SMIM12Q96EX1 92 aa8.65□□□□□ -1.02
HDAC1-209ENST00000484305 Q9HAA7 133 aa8.65□□□□□ -1.02
HDAC1-209ENST00000484305 RBFOX3A6NFN3 312 aa8.64□□□□□ -1.03
HDAC1-209ENST00000484305 IGLC6P0CF74 106 aa8.64□□□□□ -1.03
HDAC1-209ENST00000484305 UBE2D3P61077 147 aa8.64□□□□□ -1.03
HDAC1-209ENST00000484305 UBE2D2P62837 147 aa8.64□□□□□ -1.03
HDAC1-209ENST00000484305 PGPEP1Q9NXJ5 209 aa8.64□□□□□ -1.03
HDAC1-209ENST00000484305 TRBV7-3A0A075B6L6 115 aa8.63□□□□□ -1.03
HDAC1-209ENST00000484305 PSCAO43653 123 aa8.63□□□□□ -1.03
HDAC1-209ENST00000484305 P01737 135 aa8.63□□□□□ -1.03
HDAC1-209ENST00000484305 TAGLN2P37802 199 aaKnown RBP8.63□□□□□ -1.03
HDAC1-209ENST00000484305 RPS20P60866 119 aaKnown RBP8.63□□□□□ -1.03
HDAC1-209ENST00000484305 BLOC1S1P78537 153 aa8.63□□□□□ -1.03
HDAC1-209ENST00000484305 RPL36AP83881 106 aaKnown RBP8.63□□□□□ -1.03
HDAC1-209ENST00000484305 DAZ4Q86SG3 579 aaKnown RBP8.63□□□□□ -1.03
HDAC1-209ENST00000484305 FER1L6-AS1Q8NA97 138 aa8.63□□□□□ -1.03
HDAC1-209ENST00000484305 NEXN-AS1Q8NBZ9 246 aa8.63□□□□□ -1.03
HDAC1-209ENST00000484305 OR10G8Q8NGN5 311 aa8.63□□□□□ -1.03
HDAC1-209ENST00000484305 RPL36ALQ969Q0 106 aaKnown RBP8.63□□□□□ -1.03
HDAC1-209ENST00000484305 TPPP3Q9BW30 176 aa8.63□□□□□ -1.03
HDAC1-209ENST00000484305 DAZ3Q9NR90 486 aaKnown RBP8.63□□□□□ -1.03
HDAC1-209ENST00000484305 KIF25-AS1Q9Y6Z4 181 aa8.63□□□□□ -1.03
HDAC1-209ENST00000484305 F5H697 171 aa8.62□□□□□ -1.03
HDAC1-209ENST00000484305 LAGE3Q14657 143 aa8.62□□□□□ -1.03
HDAC1-209ENST00000484305 NUDT10Q8NFP7 164 aa8.62□□□□□ -1.03
HDAC1-209ENST00000484305 LYPD6BQ8NI32 183 aa8.62□□□□□ -1.03
HDAC1-209ENST00000484305 NUDT11Q96G61 164 aa8.62□□□□□ -1.03
HDAC1-209ENST00000484305 BIN3Q9NQY0 253 aa8.62□□□□□ -1.03
HDAC1-209ENST00000484305 HSPG2P98160 4391 aa8.61□□□□□ -1.03
HDAC1-209ENST00000484305 LRCOL1A6NCL2 159 aa8.61□□□□□ -1.03
HDAC1-209ENST00000484305 K7EN84 100 aa8.61□□□□□ -1.03
HDAC1-209ENST00000484305 CDPF1Q6NVV7 123 aa8.61□□□□□ -1.03
HDAC1-209ENST00000484305 NIT1Q86X76 327 aa8.61□□□□□ -1.03
HDAC1-209ENST00000484305 OCC1Q8TAD7 63 aa8.61□□□□□ -1.03
HDAC1-209ENST00000484305 AP1S3Q96PC3 154 aa8.61□□□□□ -1.03
HDAC1-209ENST00000484305 KRTAP4-5Q9BYR2 181 aa8.61□□□□□ -1.03
HDAC1-209ENST00000484305 XKRY2A2RUG3 117 aa8.6□□□□□ -1.03
HDAC1-209ENST00000484305 SMIM17P0DL12 118 aa8.6□□□□□ -1.03
HDAC1-209ENST00000484305 LYZL1Q6UWQ5 148 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms