RNA–Protein interactions for RNA: ENST00000483690.1

MCF2-207, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

TSL 3

Gene MCF2, Length 752 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-207ENST00000483690 ITSN1Q15811 1721 aa1.7□□□□□ -2.14
MCF2-207ENST00000483690 PKD1L3Q7Z443 1732 aa1.7□□□□□ -2.14
MCF2-207ENST00000483690 ANKRD31Q8N7Z5 1873 aa1.7□□□□□ -2.14
MCF2-207ENST00000483690 OR5H6Q8NGV6 325 aa1.7□□□□□ -2.14
MCF2-207ENST00000483690 PDCD10Q9BUL8 212 aa1.7□□□□□ -2.14
MCF2-207ENST00000483690 GNG8Q9UK08 70 aa1.7□□□□□ -2.14
MCF2-207ENST00000483690 BTAF1O14981 1849 aa1.7□□□□□ -2.14
MCF2-207ENST00000483690 NHSQ6T4R5 1651 aa1.7□□□□□ -2.14
MCF2-207ENST00000483690 ABCC6O95255 1503 aa1.7□□□□□ -2.14
MCF2-207ENST00000483690 TET1Q8NFU7 2136 aa1.69□□□□□ -2.14
MCF2-207ENST00000483690 A0A1W2PPM0 123 aa1.69□□□□□ -2.14
MCF2-207ENST00000483690 DEGS1O15121 323 aa1.69□□□□□ -2.14
MCF2-207ENST00000483690 IFNA17P01571 189 aa1.69□□□□□ -2.14
MCF2-207ENST00000483690 IGLV3-1P01715 115 aa1.69□□□□□ -2.14
MCF2-207ENST00000483690 MPC1LP0DKB6 136 aa1.69□□□□□ -2.14
MCF2-207ENST00000483690 PKIAP61925 76 aa1.69□□□□□ -2.14
MCF2-207ENST00000483690 CTAGE3PQ8IX95 158 aa1.69□□□□□ -2.14
MCF2-207ENST00000483690 QSER1Q2KHR3 1735 aa1.69□□□□□ -2.14
MCF2-207ENST00000483690 FAM208AQ9UK61 1670 aaKnown RBP1.68□□□□□ -2.14
MCF2-207ENST00000483690 LTN1O94822 1766 aa1.68□□□□□ -2.14
MCF2-207ENST00000483690 A0A1B0GX51 115 aa1.68□□□□□ -2.14
MCF2-207ENST00000483690 DBIP07108 87 aaKnown RBP1.68□□□□□ -2.14
MCF2-207ENST00000483690 RPS28P62857 69 aaKnown RBP1.68□□□□□ -2.14
MCF2-207ENST00000483690 PPP3R1P63098 170 aa1.68□□□□□ -2.14
MCF2-207ENST00000483690 LINC00575Q6W349 94 aa1.68□□□□□ -2.14
MCF2-207ENST00000483690 LINC00269Q8N2A0 174 aa1.68□□□□□ -2.14
MCF2-207ENST00000483690 ACBD7Q8N6N7 88 aa1.68□□□□□ -2.14
MCF2-207ENST00000483690 CCL4L1Q8NHW4 92 aa1.68□□□□□ -2.14
MCF2-207ENST00000483690 MED23Q9ULK4 1368 aa1.68□□□□□ -2.14
MCF2-207ENST00000483690 MON2Q7Z3U7 1717 aa1.68□□□□□ -2.14
MCF2-207ENST00000483690 DOT1LQ8TEK3 1739 aa1.68□□□□□ -2.14
MCF2-207ENST00000483690 KIAA1551Q9HCM1 1747 aa1.68□□□□□ -2.14
MCF2-207ENST00000483690 TOGARAM1Q9Y4F4 1720 aa1.68□□□□□ -2.14
MCF2-207ENST00000483690 AKAP11Q9UKA4 1901 aa1.68□□□□□ -2.14
MCF2-207ENST00000483690 EDC4Q6P2E9 1401 aaKnown RBP1.67□□□□□ -2.14
MCF2-207ENST00000483690 PIEZO1Q92508 2521 aa1.67□□□□□ -2.14
MCF2-207ENST00000483690 COL6A3P12111 3177 aa1.67□□□□□ -2.14
MCF2-207ENST00000483690 TRAV36DV7A0A075B6V5 113 aa1.67□□□□□ -2.14
MCF2-207ENST00000483690 SMIM31A0A1B0GVY4 71 aa1.67□□□□□ -2.14
MCF2-207ENST00000483690 C20orf202A1L168 122 aa1.67□□□□□ -2.14
MCF2-207ENST00000483690 TMEM189A5PLL7 270 aa1.67□□□□□ -2.14
MCF2-207ENST00000483690 F6UZH7 168 aa1.67□□□□□ -2.14
MCF2-207ENST00000483690 J3KT08 172 aa1.67□□□□□ -2.14
MCF2-207ENST00000483690 IGHV3-33P01772 117 aa1.67□□□□□ -2.14
MCF2-207ENST00000483690 MAXP61244 160 aa1.67□□□□□ -2.14
MCF2-207ENST00000483690 SELENOWP63302 87 aa1.67□□□□□ -2.14
MCF2-207ENST00000483690 OR8B8Q15620 311 aa1.67□□□□□ -2.14
MCF2-207ENST00000483690 MORN2Q502X0 79 aa1.67□□□□□ -2.14
MCF2-207ENST00000483690 OCIAD2Q56VL3 154 aa1.67□□□□□ -2.14
MCF2-207ENST00000483690 SCIMPQ6UWF3 145 aa1.67□□□□□ -2.14
MCF2-207ENST00000483690 C8orf59Q8N0T1 100 aaPredicted RBP1.67□□□□□ -2.14
MCF2-207ENST00000483690 THEM6Q8WUY1 208 aa1.67□□□□□ -2.14
MCF2-207ENST00000483690 PRELID3AQ96N28 172 aa1.67□□□□□ -2.14
MCF2-207ENST00000483690 CCDC115Q96NT0 180 aa1.67□□□□□ -2.14
MCF2-207ENST00000483690 LXNQ9BS40 222 aa1.67□□□□□ -2.14
MCF2-207ENST00000483690 PHIPQ8WWQ0 1821 aa1.67□□□□□ -2.14
MCF2-207ENST00000483690 CHD8Q9HCK8 2581 aa1.67□□□□□ -2.14
MCF2-207ENST00000483690 SZT2Q5T011 3432 aa1.67□□□□□ -2.14
MCF2-207ENST00000483690 UNC79Q9P2D8 2635 aa1.67□□□□□ -2.14
MCF2-207ENST00000483690 C4AP0C0L4 1744 aa1.66□□□□□ -2.14
MCF2-207ENST00000483690 C4BP0C0L5 1744 aa1.66□□□□□ -2.14
MCF2-207ENST00000483690 FOCADQ5VW36 1801 aa1.66□□□□□ -2.14
MCF2-207ENST00000483690 MYH7P12883 1935 aa1.66□□□□□ -2.14
MCF2-207ENST00000483690 FANCMQ8IYD8 2048 aa1.66□□□□□ -2.14
MCF2-207ENST00000483690 M0R143 59 aa1.66□□□□□ -2.14
MCF2-207ENST00000483690 CORTO00230 105 aa1.66□□□□□ -2.14
MCF2-207ENST00000483690 HIST1H1BP16401 226 aaKnown RBP1.66□□□□□ -2.14
MCF2-207ENST00000483690 HSD17B12Q53GQ0 312 aa1.66□□□□□ -2.14
MCF2-207ENST00000483690 LINC00305Q7Z4B0 112 aa1.66□□□□□ -2.14
MCF2-207ENST00000483690 ARL11Q969Q4 196 aa1.66□□□□□ -2.14
MCF2-207ENST00000483690 LINC00470Q9BZP3 86 aa1.66□□□□□ -2.14
MCF2-207ENST00000483690 ERG28Q9UKR5 140 aa1.66□□□□□ -2.14
MCF2-207ENST00000483690 TRAPPC2LQ9UL33 140 aa1.66□□□□□ -2.14
MCF2-207ENST00000483690 MED31Q9Y3C7 131 aa1.66□□□□□ -2.14
MCF2-207ENST00000483690 ZGRF1Q86YA3 2104 aa1.66□□□□□ -2.14
MCF2-207ENST00000483690 CITO14578 2027 aa1.66□□□□□ -2.14
MCF2-207ENST00000483690 MAP2P11137 1827 aaKnown RBP1.66□□□□□ -2.14
MCF2-207ENST00000483690 ARFGEF1Q9Y6D6 1849 aa1.66□□□□□ -2.14
MCF2-207ENST00000483690 LY75O60449 1722 aa1.66□□□□□ -2.14
MCF2-207ENST00000483690 MKI67P46013 3256 aaKnown RBP1.65□□□□□ -2.14
MCF2-207ENST00000483690 TTC28Q96AY4 2481 aa1.65□□□□□ -2.14
MCF2-207ENST00000483690 ZFC3H1O60293 1989 aaKnown RBP1.65□□□□□ -2.14
MCF2-207ENST00000483690 UBR3Q6ZT12 1888 aa1.65□□□□□ -2.14
MCF2-207ENST00000483690 PAPPA2Q9BXP8 1791 aa1.65□□□□□ -2.14
MCF2-207ENST00000483690 C5P01031 1676 aa1.65□□□□□ -2.15
MCF2-207ENST00000483690 USP54Q70EL1 1684 aa1.65□□□□□ -2.15
MCF2-207ENST00000483690 EVI2AP22794 236 aa1.65□□□□□ -2.15
MCF2-207ENST00000483690 KDELR1P24390 212 aa1.65□□□□□ -2.15
MCF2-207ENST00000483690 CMPK1P30085 196 aa1.65□□□□□ -2.15
MCF2-207ENST00000483690 NCS1P62166 190 aa1.65□□□□□ -2.15
MCF2-207ENST00000483690 NEDD8Q15843 81 aa1.65□□□□□ -2.15
MCF2-207ENST00000483690 HRCT1Q6UXD1 115 aa1.65□□□□□ -2.15
MCF2-207ENST00000483690 C9orf62Q8N4C0 152 aa1.65□□□□□ -2.15
MCF2-207ENST00000483690 TSTD1Q8NFU3 115 aa1.65□□□□□ -2.15
MCF2-207ENST00000483690 OR10AC1Q8NH08 325 aa1.65□□□□□ -2.15
MCF2-207ENST00000483690 OR5AK2Q8NH90 309 aa1.65□□□□□ -2.15
MCF2-207ENST00000483690 METTL1Q9UBP6 276 aaKnown RBP1.65□□□□□ -2.15
MCF2-207ENST00000483690 SCP2D1Q9UJQ7 156 aa1.65□□□□□ -2.15
MCF2-207ENST00000483690 PSME4Q14997 1843 aa1.65□□□□□ -2.15
MCF2-207ENST00000483690 TIAM2Q8IVF5 1701 aa1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms