RNA–Protein interactions for RNA: ENST00000483671.1

RFTN1-209, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 2

Gene RFTN1, Length 1,314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-209ENST00000483671 C18orf32Q8TCD1 76 aa11.68□□□□□ -0.54
RFTN1-209ENST00000483671 OVOL2Q9BRP0 275 aa11.68□□□□□ -0.54
RFTN1-209ENST00000483671 X6R8D5 127 aa11.68□□□□□ -0.54
RFTN1-209ENST00000483671 A8MWV9 139 aa11.67□□□□□ -0.54
RFTN1-209ENST00000483671 CRYGDP07320 174 aa11.67□□□□□ -0.54
RFTN1-209ENST00000483671 SMIM17P0DL12 118 aa11.67□□□□□ -0.54
RFTN1-209ENST00000483671 CKS2P33552 79 aa11.67□□□□□ -0.54
RFTN1-209ENST00000483671 HOXA5P20719 270 aa11.66□□□□□ -0.54
RFTN1-209ENST00000483671 SNRPEP62304 92 aaKnown RBP11.66□□□□□ -0.54
RFTN1-209ENST00000483671 RNF183Q96D59 192 aa11.66□□□□□ -0.54
RFTN1-209ENST00000483671 PRELID3AQ96N28 172 aa11.66□□□□□ -0.54
RFTN1-209ENST00000483671 ESDP10768 282 aa11.65□□□□□ -0.54
RFTN1-209ENST00000483671 UFSP1Q6NVU6 142 aa11.65□□□□□ -0.54
RFTN1-209ENST00000483671 JPT2Q9H910 190 aa11.65□□□□□ -0.54
RFTN1-209ENST00000483671 DEFB135Q30KP9 77 aa11.64□□□□□ -0.55
RFTN1-209ENST00000483671 EDA2RQ9HAV5 297 aa11.64□□□□□ -0.55
RFTN1-209ENST00000483671 TP53TG1Q9Y2A0 90 aa11.64□□□□□ -0.55
RFTN1-209ENST00000483671 PRSS47A8MTI9 375 aa11.63□□□□□ -0.55
RFTN1-209ENST00000483671 RHODO00212 210 aa11.63□□□□□ -0.55
RFTN1-209ENST00000483671 RS1O15537 224 aa11.63□□□□□ -0.55
RFTN1-209ENST00000483671 PPP1R17O96001 155 aa11.63□□□□□ -0.55
RFTN1-209ENST00000483671 LINC00310P59036 64 aa11.63□□□□□ -0.55
RFTN1-209ENST00000483671 BAGE3Q86Y29 109 aa11.63□□□□□ -0.55
RFTN1-209ENST00000483671 NRACQ8N912 160 aa11.63□□□□□ -0.55
RFTN1-209ENST00000483671 SAMD10Q9BYL1 202 aa11.63□□□□□ -0.55
RFTN1-209ENST00000483671 MRPL16Q9NX20 251 aaKnown RBP11.63□□□□□ -0.55
RFTN1-209ENST00000483671 A0A087WWL8 130 aa11.62□□□□□ -0.55
RFTN1-209ENST00000483671 LOC105371267A0A1B0GV96 52 aa11.62□□□□□ -0.55
RFTN1-209ENST00000483671 SMKR1H3BMG3 65 aa11.62□□□□□ -0.55
RFTN1-209ENST00000483671 NCR2O95944 276 aa11.62□□□□□ -0.55
RFTN1-209ENST00000483671 NPYP01303 97 aa11.62□□□□□ -0.55
RFTN1-209ENST00000483671 MIFP14174 115 aa11.62□□□□□ -0.55
RFTN1-209ENST00000483671 CFAP126Q5VTH2 177 aa11.62□□□□□ -0.55
RFTN1-209ENST00000483671 ZFP2Q6ZN57 461 aa11.62□□□□□ -0.55
RFTN1-209ENST00000483671 HIST3H2BBQ8N257 126 aa11.62□□□□□ -0.55
RFTN1-209ENST00000483671 MGAM2Q2M2H8 2515 aa11.62□□□□□ -0.55
RFTN1-209ENST00000483671 TRGV1A0A0A0MS02 117 aa11.61□□□□□ -0.55
RFTN1-209ENST00000483671 SERF1AO75920 110 aa11.61□□□□□ -0.55
RFTN1-209ENST00000483671 GAS8-AS1O95177 125 aa11.61□□□□□ -0.55
RFTN1-209ENST00000483671 TNFRSF6BO95407 300 aa11.61□□□□□ -0.55
RFTN1-209ENST00000483671 MGPP08493 103 aa11.61□□□□□ -0.55
RFTN1-209ENST00000483671 IQCJQ1A5X6 159 aa11.61□□□□□ -0.55
RFTN1-209ENST00000483671 LINC00612Q8N6U2 182 aa11.61□□□□□ -0.55
RFTN1-209ENST00000483671 OR11H2Q8NH07 326 aa11.61□□□□□ -0.55
RFTN1-209ENST00000483671 NOP10Q9NPE3 64 aaKnown RBP11.61□□□□□ -0.55
RFTN1-209ENST00000483671 TRAV26-2A0A0B4J265 109 aa11.6□□□□□ -0.55
RFTN1-209ENST00000483671 CIDEAO60543 219 aa11.6□□□□□ -0.55
RFTN1-209ENST00000483671 SUMO4Q6EEV6 95 aa11.6□□□□□ -0.55
RFTN1-209ENST00000483671 Q6ZTI0 123 aa11.6□□□□□ -0.55
RFTN1-209ENST00000483671 CHCHD1Q96BP2 118 aaKnown RBP11.6□□□□□ -0.55
RFTN1-209ENST00000483671 C18orf15Q96N68 181 aa11.6□□□□□ -0.55
RFTN1-209ENST00000483671 C20orf78Q9BR46 151 aa11.6□□□□□ -0.55
RFTN1-209ENST00000483671 NOTCH1P46531 2555 aa11.6□□□□□ -0.55
RFTN1-209ENST00000483671 TRAV4A0A0B4J268 109 aa11.6□□□□□ -0.55
RFTN1-209ENST00000483671 GATA1P15976 413 aaPredicted RBP11.6□□□□□ -0.55
RFTN1-209ENST00000483671 FAM74A4Q5TZK3 123 aa11.6□□□□□ -0.55
RFTN1-209ENST00000483671 Q8NAQ8 132 aa11.6□□□□□ -0.55
RFTN1-209ENST00000483671 URB1-AS1Q96HZ7 61 aa11.6□□□□□ -0.55
RFTN1-209ENST00000483671 PACRGQ96M98 296 aaPredicted RBP11.6□□□□□ -0.55
RFTN1-209ENST00000483671 MAP1LC3AQ9H492 121 aa11.6□□□□□ -0.55
RFTN1-209ENST00000483671 NBEAL1Q6ZS30 2694 aa11.59□□□□□ -0.55
RFTN1-209ENST00000483671 LINC01546A6NGU7 62 aa11.59□□□□□ -0.55
RFTN1-209ENST00000483671 M0QY20 66 aa11.59□□□□□ -0.55
RFTN1-209ENST00000483671 NUPR1O60356 82 aa11.59□□□□□ -0.55
RFTN1-209ENST00000483671 RPL32P62910 135 aaKnown RBP11.59□□□□□ -0.55
RFTN1-209ENST00000483671 NIT1Q86X76 327 aa11.59□□□□□ -0.55
RFTN1-209ENST00000483671 TRBV6-5A0A0K0K1A5 114 aa11.58□□□□□ -0.56
RFTN1-209ENST00000483671 IFITM10A6NMD0 228 aa11.58□□□□□ -0.56
RFTN1-209ENST00000483671 LYRM9A8MSI8 78 aa11.58□□□□□ -0.56
RFTN1-209ENST00000483671 F5H697 171 aa11.58□□□□□ -0.56
RFTN1-209ENST00000483671 H7C1H1 209 aa11.58□□□□□ -0.56
RFTN1-209ENST00000483671 K7EIL1 84 aa11.58□□□□□ -0.56
RFTN1-209ENST00000483671 LINC00614P0C842 121 aa11.58□□□□□ -0.56
RFTN1-209ENST00000483671 ZNF56Q15929 161 aa11.58□□□□□ -0.56
RFTN1-209ENST00000483671 OR4C5Q8NGB2 326 aa11.58□□□□□ -0.56
RFTN1-209ENST00000483671 NXT2Q9NPJ8 142 aaKnown RBP11.58□□□□□ -0.56
RFTN1-209ENST00000483671 IGHV4-28A0A0C4DH34 117 aa11.57□□□□□ -0.56
RFTN1-209ENST00000483671 IGHV3-53P01767 116 aa11.57□□□□□ -0.56
RFTN1-209ENST00000483671 NACAE9PAV3 2078 aa11.57□□□□□ -0.56
RFTN1-209ENST00000483671 IGLV2-18A0A075B6J9 118 aa11.56□□□□□ -0.56
RFTN1-209ENST00000483671 S100A2P29034 98 aa11.56□□□□□ -0.56
RFTN1-209ENST00000483671 IFI27P40305 119 aaPredicted RBP11.56□□□□□ -0.56
RFTN1-209ENST00000483671 SUMO2P61956 95 aaKnown RBP11.56□□□□□ -0.56
RFTN1-209ENST00000483671 RNASEKQ6P5S7 137 aaKnown RBP11.56□□□□□ -0.56
RFTN1-209ENST00000483671 Q8N8P6 123 aa11.56□□□□□ -0.56
RFTN1-209ENST00000483671 PRSS3P2Q8NHM4 247 aa11.56□□□□□ -0.56
RFTN1-209ENST00000483671 RPL39LQ96EH5 51 aaKnown RBP11.56□□□□□ -0.56
RFTN1-209ENST00000483671 HIST1H2BLQ99880 126 aa11.56□□□□□ -0.56
RFTN1-209ENST00000483671 PMCHP20382 165 aa11.55□□□□□ -0.56
RFTN1-209ENST00000483671 FA2HQ7L5A8 372 aa11.55□□□□□ -0.56
RFTN1-209ENST00000483671 TMEM18Q96B42 140 aa11.55□□□□□ -0.56
RFTN1-209ENST00000483671 SMIM2Q9BVW6 85 aa11.55□□□□□ -0.56
RFTN1-209ENST00000483671 AP5S1Q9NUS5 200 aa11.55□□□□□ -0.56
RFTN1-209ENST00000483671 TRGV2A0A075B6R0 118 aa11.54□□□□□ -0.56
RFTN1-209ENST00000483671 GAGE12BA1L429 117 aa11.54□□□□□ -0.56
RFTN1-209ENST00000483671 K7EMI3 77 aa11.54□□□□□ -0.56
RFTN1-209ENST00000483671 HSBP1O75506 76 aa11.54□□□□□ -0.56
RFTN1-209ENST00000483671 GAGE7O76087 117 aa11.54□□□□□ -0.56
RFTN1-209ENST00000483671 GAGE12FP0CL80 117 aa11.54□□□□□ -0.56
RFTN1-209ENST00000483671 GAGE12GP0CL81 117 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms