RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 RPH3ALQ9UNE2 315 aa3.9□□□□□ -1.79
CSDE1-207ENST00000483407 TRAV8-3A0A0A6YYJ7 113 aa3.89□□□□□ -1.79
CSDE1-207ENST00000483407 PGPA6NDG6 321 aa3.89□□□□□ -1.79
CSDE1-207ENST00000483407 KRTAP29-1A8MX34 341 aaPredicted RBP3.89□□□□□ -1.79
CSDE1-207ENST00000483407 F6UZH7 168 aa3.89□□□□□ -1.79
CSDE1-207ENST00000483407 MGST1P10620 155 aaKnown RBP3.89□□□□□ -1.79
CSDE1-207ENST00000483407 CYCSP99999 105 aaKnown RBP3.89□□□□□ -1.79
CSDE1-207ENST00000483407 ZNF876PQ49A33 203 aa3.89□□□□□ -1.79
CSDE1-207ENST00000483407 LRRC37A5PQ49AS3 106 aa3.89□□□□□ -1.79
CSDE1-207ENST00000483407 GOLT1AQ6ZVE7 132 aa3.89□□□□□ -1.79
CSDE1-207ENST00000483407 Q8N9P0 234 aaPredicted RBP3.89□□□□□ -1.79
CSDE1-207ENST00000483407 ATP6V0E2Q8NHE4 81 aa3.89□□□□□ -1.79
CSDE1-207ENST00000483407 SCGB1C1Q8TD33 95 aa3.89□□□□□ -1.79
CSDE1-207ENST00000483407 CCDC32Q9BV29 185 aa3.89□□□□□ -1.79
CSDE1-207ENST00000483407 GTSF1LQ9H1H1 148 aa3.89□□□□□ -1.79
CSDE1-207ENST00000483407 OR5AC2Q9NZP5 309 aa3.89□□□□□ -1.79
CSDE1-207ENST00000483407 MBD2Q9UBB5 411 aa3.89□□□□□ -1.79
CSDE1-207ENST00000483407 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.88□□□□□ -1.79
CSDE1-207ENST00000483407 IGHV3-73A0A0B4J1V6 119 aa3.88□□□□□ -1.79
CSDE1-207ENST00000483407 SERTM2A0A1B0GWG4 89 aa3.88□□□□□ -1.79
CSDE1-207ENST00000483407 A0A1W2PPV4 95 aa3.88□□□□□ -1.79
CSDE1-207ENST00000483407 GGTLC3B5MD39 225 aa3.88□□□□□ -1.79
CSDE1-207ENST00000483407 K7EQM0 130 aa3.88□□□□□ -1.79
CSDE1-207ENST00000483407 TAAR5O14804 337 aa3.88□□□□□ -1.79
CSDE1-207ENST00000483407 RS1O15537 224 aa3.88□□□□□ -1.79
CSDE1-207ENST00000483407 SEC11BP0C7V7 166 aa3.88□□□□□ -1.79
CSDE1-207ENST00000483407 PET100P0DJ07 73 aa3.88□□□□□ -1.79
CSDE1-207ENST00000483407 ASAH1Q13510 395 aa3.88□□□□□ -1.79
CSDE1-207ENST00000483407 ACOT6Q3I5F7 207 aaPredicted RBP3.88□□□□□ -1.79
CSDE1-207ENST00000483407 CFAP126Q5VTH2 177 aa3.88□□□□□ -1.79
CSDE1-207ENST00000483407 Q6ZSA8 131 aa3.88□□□□□ -1.79
CSDE1-207ENST00000483407 RMI2Q96E14 147 aa3.88□□□□□ -1.79
CSDE1-207ENST00000483407 A0A087WWC5 75 aa3.87□□□□□ -1.79
CSDE1-207ENST00000483407 TRAV8-1A0A0A6YYK1 113 aa3.87□□□□□ -1.79
CSDE1-207ENST00000483407 RBFOX3A6NFN3 312 aa3.87□□□□□ -1.79
CSDE1-207ENST00000483407 LECT2O14960 151 aa3.87□□□□□ -1.79
CSDE1-207ENST00000483407 SIX6O95475 246 aa3.87□□□□□ -1.79
CSDE1-207ENST00000483407 WFDC2Q14508 124 aa3.87□□□□□ -1.79
CSDE1-207ENST00000483407 ZFP69Q49AA0 526 aa3.87□□□□□ -1.79
CSDE1-207ENST00000483407 ENKURQ8TC29 256 aa3.87□□□□□ -1.79
CSDE1-207ENST00000483407 PTH2Q96A98 100 aa3.87□□□□□ -1.79
CSDE1-207ENST00000483407 TVP23CQ96ET8 276 aa3.87□□□□□ -1.79
CSDE1-207ENST00000483407 URGCP-MRPS24S4R325 110 aa3.87□□□□□ -1.79
CSDE1-207ENST00000483407 IGLV9-49A0A0B4J1Y8 123 aa3.86□□□□□ -1.79
CSDE1-207ENST00000483407 A8MWV9 139 aa3.86□□□□□ -1.79
CSDE1-207ENST00000483407 EIF3GO75821 320 aaKnown RBP eCLIP3.86□□□□□ -1.79
CSDE1-207ENST00000483407 GCGP01275 180 aa3.86□□□□□ -1.79
CSDE1-207ENST00000483407 S100A4P26447 101 aaKnown RBP3.86□□□□□ -1.79
CSDE1-207ENST00000483407 FGF8P55075 233 aaPredicted RBP3.86□□□□□ -1.79
CSDE1-207ENST00000483407 GNG5P63218 68 aa3.86□□□□□ -1.79
CSDE1-207ENST00000483407 SMUG1Q53HV7 270 aa3.86□□□□□ -1.79
CSDE1-207ENST00000483407 ZNF506Q5JVG8 444 aa3.86□□□□□ -1.79
CSDE1-207ENST00000483407 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.86□□□□□ -1.79
CSDE1-207ENST00000483407 DPPA3Q6W0C5 159 aa3.86□□□□□ -1.79
CSDE1-207ENST00000483407 ZFP2Q6ZN57 461 aa3.86□□□□□ -1.79
CSDE1-207ENST00000483407 SCXQ7RTU7 201 aa3.86□□□□□ -1.79
CSDE1-207ENST00000483407 DAZ4Q86SG3 579 aaKnown RBP3.86□□□□□ -1.79
CSDE1-207ENST00000483407 Q8N976 141 aa3.86□□□□□ -1.79
CSDE1-207ENST00000483407 C5orf17Q8NAS9 161 aa3.86□□□□□ -1.79
CSDE1-207ENST00000483407 PPP1R1CQ8WVI7 109 aa3.86□□□□□ -1.79
CSDE1-207ENST00000483407 BAALCQ8WXS3 180 aa3.86□□□□□ -1.79
CSDE1-207ENST00000483407 C9orf85Q96MD7 179 aa3.86□□□□□ -1.79
CSDE1-207ENST00000483407 SMIM3Q9BZL3 60 aa3.86□□□□□ -1.79
CSDE1-207ENST00000483407 DAZ3Q9NR90 486 aaKnown RBP3.86□□□□□ -1.79
CSDE1-207ENST00000483407 HSPB11Q9Y547 144 aa3.86□□□□□ -1.79
CSDE1-207ENST00000483407 VPS13BQ7Z7G8 4022 aa3.86□□□□□ -1.79
CSDE1-207ENST00000483407 IGKV2D-24A0A075B6R9 120 aa3.85□□□□□ -1.79
CSDE1-207ENST00000483407 A0A1B0GUV1 79 aa3.85□□□□□ -1.79
CSDE1-207ENST00000483407 OXTP01178 125 aa3.85□□□□□ -1.79
CSDE1-207ENST00000483407 TSHBP01222 138 aa3.85□□□□□ -1.79
CSDE1-207ENST00000483407 TCRAP04437 139 aa3.85□□□□□ -1.79
CSDE1-207ENST00000483407 RPL12P30050 165 aaKnown RBP3.85□□□□□ -1.79
CSDE1-207ENST00000483407 ZNF80P51504 273 aaPredicted RBP3.85□□□□□ -1.79
CSDE1-207ENST00000483407 FLI1Q01543 452 aaPredicted RBP3.85□□□□□ -1.79
CSDE1-207ENST00000483407 LGALSLQ3ZCW2 172 aaPredicted RBP3.85□□□□□ -1.79
CSDE1-207ENST00000483407 SAPCD1Q5SSQ6 148 aa3.85□□□□□ -1.79
CSDE1-207ENST00000483407 KCNIP4Q6PIL6 250 aa3.85□□□□□ -1.79
CSDE1-207ENST00000483407 CYB561D1Q8N8Q1 229 aa3.85□□□□□ -1.79
CSDE1-207ENST00000483407 OR10G9Q8NGN4 311 aa3.85□□□□□ -1.79
CSDE1-207ENST00000483407 OR10G7Q8NGN6 311 aa3.85□□□□□ -1.79
CSDE1-207ENST00000483407 CHAC1Q9BUX1 264 aa3.85□□□□□ -1.79
CSDE1-207ENST00000483407 PARLQ9H300 379 aa3.85□□□□□ -1.79
CSDE1-207ENST00000483407 NDUFA13Q9P0J0 144 aa3.85□□□□□ -1.79
CSDE1-207ENST00000483407 PSG8Q9UQ74 426 aa3.85□□□□□ -1.79
CSDE1-207ENST00000483407 A0A087WX48 190 aa3.84□□□□□ -1.79
CSDE1-207ENST00000483407 RNF222A6NCQ9 220 aa3.84□□□□□ -1.79
CSDE1-207ENST00000483407 INMT-MINDY4F8WBC2 141 aa3.84□□□□□ -1.79
CSDE1-207ENST00000483407 HMGB3O15347 200 aaKnown RBP3.84□□□□□ -1.79
CSDE1-207ENST00000483407 SSNA1O43805 119 aa3.84□□□□□ -1.79
CSDE1-207ENST00000483407 MPC2O95563 127 aa3.84□□□□□ -1.79
CSDE1-207ENST00000483407 ARL14EPLP0DKL9 152 aa3.84□□□□□ -1.79
CSDE1-207ENST00000483407 LINC00694P0DN24 101 aa3.84□□□□□ -1.79
CSDE1-207ENST00000483407 RNASE3P12724 160 aaKnown RBP3.84□□□□□ -1.79
CSDE1-207ENST00000483407 ASIPP42127 132 aa3.84□□□□□ -1.79
CSDE1-207ENST00000483407 CDC34P49427 236 aaPredicted RBP3.84□□□□□ -1.79
CSDE1-207ENST00000483407 H2BFSP57053 126 aa3.84□□□□□ -1.79
CSDE1-207ENST00000483407 RAB2AP61019 212 aa3.84□□□□□ -1.79
CSDE1-207ENST00000483407 ELOBQ15370 118 aa3.84□□□□□ -1.79
CSDE1-207ENST00000483407 LINC01620Q4KN68 170 aa3.84□□□□□ -1.79
CSDE1-207ENST00000483407 C14orf177Q52M58 125 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms