RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 TRBV10-2A0A0K0K1G8 114 aa8.91□□□□□ -0.98
VTI1A-205ENST00000483122 S100A4P26447 101 aaKnown RBP8.91□□□□□ -0.98
VTI1A-205ENST00000483122 PPDPFQ9H3Y8 114 aa8.91□□□□□ -0.98
VTI1A-205ENST00000483122 A0A0B4J2C4 111 aa8.91□□□□□ -0.98
VTI1A-205ENST00000483122 CLEC3BP05452 202 aa8.91□□□□□ -0.98
VTI1A-205ENST00000483122 KLRB1Q12918 225 aa8.91□□□□□ -0.98
VTI1A-205ENST00000483122 VPREB3Q9UKI3 123 aa8.91□□□□□ -0.98
VTI1A-205ENST00000483122 PHLDA3Q9Y5J5 127 aa8.91□□□□□ -0.98
VTI1A-205ENST00000483122 PKD1L2Q7Z442 2459 aa8.91□□□□□ -0.98
VTI1A-205ENST00000483122 USP24Q9UPU5 2620 aa8.9□□□□□ -0.99
VTI1A-205ENST00000483122 IGHV3-64A0A075B6Q5 118 aa8.9□□□□□ -0.99
VTI1A-205ENST00000483122 IGHV1-69DA0A0B4J2H0 117 aa8.9□□□□□ -0.99
VTI1A-205ENST00000483122 TRIAP1O43715 76 aa8.9□□□□□ -0.99
VTI1A-205ENST00000483122 LINC01587Q99440 93 aa8.9□□□□□ -0.99
VTI1A-205ENST00000483122 E7EQL1 145 aa8.89□□□□□ -0.99
VTI1A-205ENST00000483122 DEFB1P60022 68 aa8.89□□□□□ -0.99
VTI1A-205ENST00000483122 LY6DQ14210 128 aa8.89□□□□□ -0.99
VTI1A-205ENST00000483122 ZNF56Q15929 161 aa8.89□□□□□ -0.99
VTI1A-205ENST00000483122 C15orf32Q32M92 178 aa8.89□□□□□ -0.99
VTI1A-205ENST00000483122 C2orf82Q6UX34 121 aa8.89□□□□□ -0.99
VTI1A-205ENST00000483122 LINC01600Q96MT4 127 aa8.89□□□□□ -0.99
VTI1A-205ENST00000483122 ZNF876PQ49A33 203 aa8.89□□□□□ -0.99
VTI1A-205ENST00000483122 Q8NA96 180 aa8.89□□□□□ -0.99
VTI1A-205ENST00000483122 C20orf173Q96LM9 149 aa8.89□□□□□ -0.99
VTI1A-205ENST00000483122 DUX3Q96PT4 197 aa8.89□□□□□ -0.99
VTI1A-205ENST00000483122 GNRH2O43555 120 aa8.88□□□□□ -0.99
VTI1A-205ENST00000483122 ID1P41134 155 aa8.88□□□□□ -0.99
VTI1A-205ENST00000483122 ZFAND2AQ8N6M9 145 aa8.88□□□□□ -0.99
VTI1A-205ENST00000483122 OPRPNQ99935 248 aaPredicted RBP8.88□□□□□ -0.99
VTI1A-205ENST00000483122 ITPR1Q14643 2758 aa8.88□□□□□ -0.99
VTI1A-205ENST00000483122 H7C423 109 aa8.88□□□□□ -0.99
VTI1A-205ENST00000483122 CLEC19AQ6UXS0 136 aa8.88□□□□□ -0.99
VTI1A-205ENST00000483122 MRPL53Q96EL3 112 aaKnown RBP8.88□□□□□ -0.99
VTI1A-205ENST00000483122 MUC4Q99102 2169 aa8.87□□□□□ -0.99
VTI1A-205ENST00000483122 ATMQ13315 3056 aa8.87□□□□□ -0.99
VTI1A-205ENST00000483122 IGHV7-81A0A0B4J1V7 117 aa8.87□□□□□ -0.99
VTI1A-205ENST00000483122 TMEM141Q96I45 108 aa8.87□□□□□ -0.99
VTI1A-205ENST00000483122 C16orf92Q96LL3 132 aa8.87□□□□□ -0.99
VTI1A-205ENST00000483122 JPT2Q9H910 190 aa8.87□□□□□ -0.99
VTI1A-205ENST00000483122 YAE1D1Q9NRH1 226 aa8.87□□□□□ -0.99
VTI1A-205ENST00000483122 ZNF580Q9UK33 172 aa8.87□□□□□ -0.99
VTI1A-205ENST00000483122 PCNX1Q96RV3 2341 aa8.87□□□□□ -0.99
VTI1A-205ENST00000483122 TRBV30A0A0K0K1B3 111 aa8.86□□□□□ -0.99
VTI1A-205ENST00000483122 LEPROTO15243 131 aa8.86□□□□□ -0.99
VTI1A-205ENST00000483122 POLR2KP53803 58 aaKnown RBP8.86□□□□□ -0.99
VTI1A-205ENST00000483122 LINC00315P59091 139 aa8.86□□□□□ -0.99
VTI1A-205ENST00000483122 TIMM17AQ99595 171 aa8.86□□□□□ -0.99
VTI1A-205ENST00000483122 SPANXA1Q9NS26 97 aa8.86□□□□□ -0.99
VTI1A-205ENST00000483122 ADGRG4Q8IZF6 3080 aa8.86□□□□□ -0.99
VTI1A-205ENST00000483122 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.86□□□□□ -0.99
VTI1A-205ENST00000483122 A0A0G2JNJ9 132 aa8.86□□□□□ -0.99
VTI1A-205ENST00000483122 TMEM223A0PJW6 202 aa8.86□□□□□ -0.99
VTI1A-205ENST00000483122 RNASE3P12724 160 aaKnown RBP8.86□□□□□ -0.99
VTI1A-205ENST00000483122 ECSCRQ19T08 205 aa8.86□□□□□ -0.99
VTI1A-205ENST00000483122 Q9UFV3 132 aa8.86□□□□□ -0.99
VTI1A-205ENST00000483122 BSNQ9UPA5 3926 aa8.86□□□□□ -0.99
VTI1A-205ENST00000483122 TRAV21A0A0B4J279 112 aa8.85□□□□□ -0.99
VTI1A-205ENST00000483122 CCDC140Q96MF4 163 aa8.85□□□□□ -0.99
VTI1A-205ENST00000483122 TMEM126AQ9H061 195 aa8.85□□□□□ -0.99
VTI1A-205ENST00000483122 KIF25-AS1Q9Y6Z4 181 aa8.85□□□□□ -0.99
VTI1A-205ENST00000483122 M0R2P5 195 aa8.85□□□□□ -0.99
VTI1A-205ENST00000483122 PPP1R17O96001 155 aa8.85□□□□□ -0.99
VTI1A-205ENST00000483122 MRPL23Q16540 153 aaKnown RBP8.85□□□□□ -0.99
VTI1A-205ENST00000483122 ADARB2-AS1A8MUL3 147 aa8.84□□□□□ -0.99
VTI1A-205ENST00000483122 RNASE4P34096 147 aaKnown RBP8.84□□□□□ -0.99
VTI1A-205ENST00000483122 UBE2E1P51965 193 aa8.84□□□□□ -0.99
VTI1A-205ENST00000483122 SUMO4Q6EEV6 95 aa8.84□□□□□ -0.99
VTI1A-205ENST00000483122 Q6ZSV7 163 aa8.84□□□□□ -0.99
VTI1A-205ENST00000483122 POM121L12Q8N7R1 296 aa8.84□□□□□ -0.99
VTI1A-205ENST00000483122 LY6G5BQ8NDX9 201 aa8.84□□□□□ -0.99
VTI1A-205ENST00000483122 CLEC2BQ92478 149 aa8.84□□□□□ -0.99
VTI1A-205ENST00000483122 METTL26Q96S19 204 aa8.84□□□□□ -0.99
VTI1A-205ENST00000483122 ABCA4P78363 2273 aa8.84□□□□□ -0.99
VTI1A-205ENST00000483122 Q8N6K4 173 aa8.84□□□□□ -0.99
VTI1A-205ENST00000483122 ITLN2Q8WWU7 325 aaPredicted RBP8.84□□□□□ -0.99
VTI1A-205ENST00000483122 ICOSQ9Y6W8 199 aa8.84□□□□□ -0.99
VTI1A-205ENST00000483122 IGHV4OR15-8A0A075B7B6 117 aa8.83□□□□□ -1
VTI1A-205ENST00000483122 A0A087WW49 117 aa8.83□□□□□ -1
VTI1A-205ENST00000483122 A0A0J9YXY3 114 aa8.83□□□□□ -1
VTI1A-205ENST00000483122 TRBV7-7A0A0K0K1E9 115 aa8.83□□□□□ -1
VTI1A-205ENST00000483122 SDHAF1A6NFY7 115 aa8.83□□□□□ -1
VTI1A-205ENST00000483122 ODF3BA8MYP8 253 aa8.83□□□□□ -1
VTI1A-205ENST00000483122 ZNF22P17026 224 aaPredicted RBP8.83□□□□□ -1
VTI1A-205ENST00000483122 LENEPQ9Y5L5 61 aa8.83□□□□□ -1
VTI1A-205ENST00000483122 PIEZO2Q9H5I5 2752 aa8.83□□□□□ -1
VTI1A-205ENST00000483122 A0A087WWL8 130 aa8.83□□□□□ -1
VTI1A-205ENST00000483122 VCYO14598 125 aa8.83□□□□□ -1
VTI1A-205ENST00000483122 CEMP1Q6PRD7 247 aaPredicted RBP8.83□□□□□ -1
VTI1A-205ENST00000483122 FAM110DQ8TAY7 271 aaPredicted RBP8.83□□□□□ -1
VTI1A-205ENST00000483122 CACNA1BQ00975 2339 aa8.82□□□□□ -1
VTI1A-205ENST00000483122 FAM236AA0A1B0GUQ0 79 aa8.82□□□□□ -1
VTI1A-205ENST00000483122 FAM236BA0A1B0GV22 79 aa8.82□□□□□ -1
VTI1A-205ENST00000483122 H3BT86 120 aa8.82□□□□□ -1
VTI1A-205ENST00000483122 LINC00694P0DN24 101 aa8.82□□□□□ -1
VTI1A-205ENST00000483122 EBI3Q14213 229 aa8.82□□□□□ -1
VTI1A-205ENST00000483122 LINC00477Q96M19 166 aa8.82□□□□□ -1
VTI1A-205ENST00000483122 U3KQE9 123 aa8.82□□□□□ -1
VTI1A-205ENST00000483122 MED14OSP0DP75 135 aa8.82□□□□□ -1
VTI1A-205ENST00000483122 Q8N9W7 124 aa8.82□□□□□ -1
VTI1A-205ENST00000483122 ZNF256Q9Y2P7 627 aaPredicted RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms