RNA–Protein interactions for RNA: ENST00000482855.5

RPGR-208, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 2,819 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-208ENST00000482855 GPHB5Q86YW7 130 aa8.35□□□□□ -1.07
RPGR-208ENST00000482855 ZNRF2Q8NHG8 242 aa8.35□□□□□ -1.07
RPGR-208ENST00000482855 LENEPQ9Y5L5 61 aa8.35□□□□□ -1.07
RPGR-208ENST00000482855 FAM208BQ5VWN6 2430 aa8.34□□□□□ -1.07
RPGR-208ENST00000482855 ANKRD11Q6UB99 2663 aaPredicted RBP8.34□□□□□ -1.07
RPGR-208ENST00000482855 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.34□□□□□ -1.07
RPGR-208ENST00000482855 IGF1P05019 195 aa8.34□□□□□ -1.07
RPGR-208ENST00000482855 PRR30Q53SZ7 412 aaPredicted RBP8.34□□□□□ -1.07
RPGR-208ENST00000482855 ITPR1Q14643 2758 aa8.34□□□□□ -1.07
RPGR-208ENST00000482855 ABCA4P78363 2273 aa8.34□□□□□ -1.07
RPGR-208ENST00000482855 IGHV7-81A0A0B4J1V7 117 aa8.34□□□□□ -1.07
RPGR-208ENST00000482855 TRBV10-2A0A0K0K1G8 114 aa8.34□□□□□ -1.07
RPGR-208ENST00000482855 RPL39P62891 51 aaKnown RBP8.34□□□□□ -1.07
RPGR-208ENST00000482855 MEIG1Q5JSS6 88 aa8.34□□□□□ -1.07
RPGR-208ENST00000482855 LY6G5BQ8NDX9 201 aa8.34□□□□□ -1.07
RPGR-208ENST00000482855 DEFB104AQ8WTQ1 72 aa8.34□□□□□ -1.07
RPGR-208ENST00000482855 TIMM17AQ99595 171 aa8.34□□□□□ -1.07
RPGR-208ENST00000482855 ELANEP08246 267 aa8.33□□□□□ -1.08
RPGR-208ENST00000482855 ECSCRQ19T08 205 aa8.33□□□□□ -1.08
RPGR-208ENST00000482855 TMEM95Q3KNT9 176 aa8.33□□□□□ -1.08
RPGR-208ENST00000482855 ZNF876PQ49A33 203 aa8.33□□□□□ -1.08
RPGR-208ENST00000482855 CLEC19AQ6UXS0 136 aa8.33□□□□□ -1.08
RPGR-208ENST00000482855 MUSTN1Q8IVN3 82 aa8.33□□□□□ -1.08
RPGR-208ENST00000482855 BEX4Q9NWD9 120 aaPredicted RBP8.33□□□□□ -1.08
RPGR-208ENST00000482855 CHD8Q9HCK8 2581 aa8.33□□□□□ -1.08
RPGR-208ENST00000482855 B9A039 149 aa8.33□□□□□ -1.08
RPGR-208ENST00000482855 MED14OSP0DP75 135 aa8.33□□□□□ -1.08
RPGR-208ENST00000482855 FAM110DQ8TAY7 271 aaPredicted RBP8.33□□□□□ -1.08
RPGR-208ENST00000482855 LINC01600Q96MT4 127 aa8.33□□□□□ -1.08
RPGR-208ENST00000482855 ODF3BA8MYP8 253 aa8.32□□□□□ -1.08
RPGR-208ENST00000482855 J3QKU1 62 aa8.32□□□□□ -1.08
RPGR-208ENST00000482855 LGALS9O00182 355 aa8.32□□□□□ -1.08
RPGR-208ENST00000482855 ZFAND2AQ8N6M9 145 aa8.32□□□□□ -1.08
RPGR-208ENST00000482855 COL6A6A6NMZ7 2263 aa8.32□□□□□ -1.08
RPGR-208ENST00000482855 LEPROTO15243 131 aa8.32□□□□□ -1.08
RPGR-208ENST00000482855 C1orf122Q6ZSJ8 110 aa8.32□□□□□ -1.08
RPGR-208ENST00000482855 Q8N6K4 173 aa8.32□□□□□ -1.08
RPGR-208ENST00000482855 LINC00477Q96M19 166 aa8.32□□□□□ -1.08
RPGR-208ENST00000482855 MDFICQ9P1T7 246 aa8.32□□□□□ -1.08
RPGR-208ENST00000482855 VCYO14598 125 aa8.31□□□□□ -1.08
RPGR-208ENST00000482855 MRPL23Q16540 153 aaKnown RBP8.31□□□□□ -1.08
RPGR-208ENST00000482855 C2orf82Q6UX34 121 aa8.31□□□□□ -1.08
RPGR-208ENST00000482855 C9orf139Q6ZV77 190 aa8.31□□□□□ -1.08
RPGR-208ENST00000482855 CCDC140Q96MF4 163 aa8.31□□□□□ -1.08
RPGR-208ENST00000482855 CSMD1Q96PZ7 3565 aa8.31□□□□□ -1.08
RPGR-208ENST00000482855 CACNA1BQ00975 2339 aa8.31□□□□□ -1.08
RPGR-208ENST00000482855 IGHV4OR15-8A0A075B7B6 117 aa8.3□□□□□ -1.08
RPGR-208ENST00000482855 A0A087WW49 117 aa8.3□□□□□ -1.08
RPGR-208ENST00000482855 TRBV30A0A0K0K1B3 111 aa8.3□□□□□ -1.08
RPGR-208ENST00000482855 POLR2KP53803 58 aaKnown RBP8.3□□□□□ -1.08
RPGR-208ENST00000482855 POM121L12Q8N7R1 296 aa8.3□□□□□ -1.08
RPGR-208ENST00000482855 C20orf173Q96LM9 149 aa8.3□□□□□ -1.08
RPGR-208ENST00000482855 MUC4Q99102 2169 aa8.3□□□□□ -1.08
RPGR-208ENST00000482855 TMEM223A0PJW6 202 aa8.3□□□□□ -1.08
RPGR-208ENST00000482855 GNRH2O43555 120 aa8.3□□□□□ -1.08
RPGR-208ENST00000482855 TRIAP1O43715 76 aa8.3□□□□□ -1.08
RPGR-208ENST00000482855 TNFRSF18Q9Y5U5 241 aa8.3□□□□□ -1.08
RPGR-208ENST00000482855 EPG5Q9HCE0 2579 aa8.3□□□□□ -1.08
RPGR-208ENST00000482855 M0R1W7 72 aa8.3□□□□□ -1.08
RPGR-208ENST00000482855 M0R2P5 195 aa8.3□□□□□ -1.08
RPGR-208ENST00000482855 RNASE3P12724 160 aaKnown RBP8.3□□□□□ -1.08
RPGR-208ENST00000482855 RNASE4P34096 147 aaKnown RBP8.3□□□□□ -1.08
RPGR-208ENST00000482855 VMO1Q7Z5L0 202 aa8.3□□□□□ -1.08
RPGR-208ENST00000482855 ITLN2Q8WWU7 325 aaPredicted RBP8.3□□□□□ -1.08
RPGR-208ENST00000482855 EEF1AKMT3Q96AZ1 226 aa8.3□□□□□ -1.08
RPGR-208ENST00000482855 IGHV3-64A0A075B6Q5 118 aa8.29□□□□□ -1.08
RPGR-208ENST00000482855 ZNF56Q15929 161 aa8.29□□□□□ -1.08
RPGR-208ENST00000482855 SUMO4Q6EEV6 95 aa8.29□□□□□ -1.08
RPGR-208ENST00000482855 Q8N9W7 124 aa8.29□□□□□ -1.08
RPGR-208ENST00000482855 Q8NA96 180 aa8.29□□□□□ -1.08
RPGR-208ENST00000482855 U3KQE9 123 aa8.29□□□□□ -1.08
RPGR-208ENST00000482855 SDHAF1A6NFY7 115 aa8.29□□□□□ -1.08
RPGR-208ENST00000482855 OVOL1O14753 267 aa8.29□□□□□ -1.08
RPGR-208ENST00000482855 EBI3Q14213 229 aa8.29□□□□□ -1.08
RPGR-208ENST00000482855 IGSF10Q6WRI0 2623 aa8.29□□□□□ -1.08
RPGR-208ENST00000482855 KIF25-AS1Q9Y6Z4 181 aa8.29□□□□□ -1.08
RPGR-208ENST00000482855 F5H697 171 aa8.28□□□□□ -1.08
RPGR-208ENST00000482855 H3BT86 120 aa8.28□□□□□ -1.08
RPGR-208ENST00000482855 ATP6V0E1O15342 81 aa8.28□□□□□ -1.08
RPGR-208ENST00000482855 CD3EP07766 207 aa8.28□□□□□ -1.08
RPGR-208ENST00000482855 LINC00315P59091 139 aa8.28□□□□□ -1.08
RPGR-208ENST00000482855 TMEM126AQ9H061 195 aa8.28□□□□□ -1.08
RPGR-208ENST00000482855 OOSP1A8MZH6 123 aa8.28□□□□□ -1.08
RPGR-208ENST00000482855 LY6DQ14210 128 aa8.28□□□□□ -1.08
RPGR-208ENST00000482855 CHCHD5Q9BSY4 110 aa8.28□□□□□ -1.08
RPGR-208ENST00000482855 ADGRG4Q8IZF6 3080 aa8.28□□□□□ -1.08
RPGR-208ENST00000482855 SPTBN2O15020 2390 aa8.28□□□□□ -1.08
RPGR-208ENST00000482855 FAM240AA0A1B0GVK7 77 aa8.27□□□□□ -1.09
RPGR-208ENST00000482855 H7C423 109 aa8.27□□□□□ -1.09
RPGR-208ENST00000482855 NXPH4O95158 308 aa8.27□□□□□ -1.09
RPGR-208ENST00000482855 TRBV7-1A0A0A6YYK4 115 aa8.27□□□□□ -1.09
RPGR-208ENST00000482855 A0A0J9YX75 114 aa8.27□□□□□ -1.09
RPGR-208ENST00000482855 BRI3O95415 125 aa8.27□□□□□ -1.09
RPGR-208ENST00000482855 IGHV1-69P01742 117 aa8.27□□□□□ -1.09
RPGR-208ENST00000482855 COX6CP09669 75 aa8.27□□□□□ -1.09
RPGR-208ENST00000482855 ICOSQ9Y6W8 199 aa8.27□□□□□ -1.09
RPGR-208ENST00000482855 A0A0J9YXY3 114 aa8.26□□□□□ -1.09
RPGR-208ENST00000482855 ZNF22P17026 224 aaPredicted RBP8.26□□□□□ -1.09
RPGR-208ENST00000482855 DEFB1P60022 68 aa8.26□□□□□ -1.09
RPGR-208ENST00000482855 OPRPNQ99935 248 aaPredicted RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms