RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 TTC32Q5I0X7 151 aa8.62□□□□□ -1.03
HPS4-212ENST00000481910 PSMG4Q5JS54 123 aa8.62□□□□□ -1.03
HPS4-212ENST00000481910 FAM159AQ6UWV7 190 aa8.62□□□□□ -1.03
HPS4-212ENST00000481910 RNF182Q8N6D2 247 aa8.62□□□□□ -1.03
HPS4-212ENST00000481910 C20orf173Q96LM9 149 aa8.62□□□□□ -1.03
HPS4-212ENST00000481910 PRADC1Q9BSG0 188 aa8.62□□□□□ -1.03
HPS4-212ENST00000481910 AAMDCQ9H7C9 122 aa8.62□□□□□ -1.03
HPS4-212ENST00000481910 TRAV8-2A0A0B4J237 113 aa8.62□□□□□ -1.03
HPS4-212ENST00000481910 TRAV1-1A0A0B4J248 108 aa8.62□□□□□ -1.03
HPS4-212ENST00000481910 CMC4P56277 68 aaPredicted RBP8.62□□□□□ -1.03
HPS4-212ENST00000481910 KRTDAPP60985 99 aa8.62□□□□□ -1.03
HPS4-212ENST00000481910 FOXI1Q12951 378 aa8.62□□□□□ -1.03
HPS4-212ENST00000481910 ICAM4Q14773 271 aa8.62□□□□□ -1.03
HPS4-212ENST00000481910 MDFICQ9P1T7 246 aa8.62□□□□□ -1.03
HPS4-212ENST00000481910 DEFB131AP59861 70 aa8.61□□□□□ -1.03
HPS4-212ENST00000481910 ODF3L2Q3SX64 289 aa8.61□□□□□ -1.03
HPS4-212ENST00000481910 KPRPQ5T749 579 aaPredicted RBP8.61□□□□□ -1.03
HPS4-212ENST00000481910 EXOC3-AS1Q8N2X6 119 aa8.61□□□□□ -1.03
HPS4-212ENST00000481910 MAP6D1Q9H9H5 199 aa8.61□□□□□ -1.03
HPS4-212ENST00000481910 NUPR1O60356 82 aa8.6□□□□□ -1.03
HPS4-212ENST00000481910 CA1P00915 261 aaPredicted RBP8.6□□□□□ -1.03
HPS4-212ENST00000481910 HLA-DMBP28068 263 aa8.6□□□□□ -1.03
HPS4-212ENST00000481910 CCL20P78556 96 aa8.6□□□□□ -1.03
HPS4-212ENST00000481910 LYPD1Q8N2G4 141 aa8.6□□□□□ -1.03
HPS4-212ENST00000481910 RARRES2Q99969 163 aa8.6□□□□□ -1.03
HPS4-212ENST00000481910 VGLL1Q99990 258 aa8.6□□□□□ -1.03
HPS4-212ENST00000481910 Q9H3A6 140 aa8.6□□□□□ -1.03
HPS4-212ENST00000481910 ANK2Q01484 3957 aa8.6□□□□□ -1.03
HPS4-212ENST00000481910 PGPA6NDG6 321 aa8.6□□□□□ -1.03
HPS4-212ENST00000481910 PRB2P02812 416 aaPredicted RBP8.6□□□□□ -1.03
HPS4-212ENST00000481910 C19orf73Q9NVV2 129 aa8.6□□□□□ -1.03
HPS4-212ENST00000481910 MT-ATP8P03928 68 aa8.59□□□□□ -1.03
HPS4-212ENST00000481910 CRISP2P16562 243 aa8.59□□□□□ -1.03
HPS4-212ENST00000481910 CAMPP49913 170 aa8.59□□□□□ -1.03
HPS4-212ENST00000481910 GNG5P63218 68 aa8.59□□□□□ -1.03
HPS4-212ENST00000481910 GAGE2BQ13066 116 aa8.59□□□□□ -1.03
HPS4-212ENST00000481910 GAGE2EQ4V326 116 aa8.59□□□□□ -1.03
HPS4-212ENST00000481910 Q8N1Y9 231 aa8.59□□□□□ -1.03
HPS4-212ENST00000481910 WFDC10AQ9H1F0 79 aa8.59□□□□□ -1.03
HPS4-212ENST00000481910 OTORQ9NRC9 128 aa8.59□□□□□ -1.03
HPS4-212ENST00000481910 GAGE2DQ9UEU5 116 aa8.59□□□□□ -1.03
HPS4-212ENST00000481910 M0R3E3 92 aa8.58□□□□□ -1.04
HPS4-212ENST00000481910 LINC00694P0DN24 101 aa8.58□□□□□ -1.04
HPS4-212ENST00000481910 PRB4P10163 310 aaPredicted RBP8.58□□□□□ -1.04
HPS4-212ENST00000481910 OR10J3Q5JRS4 329 aa8.58□□□□□ -1.04
HPS4-212ENST00000481910 BORCS7Q96B45 105 aa8.58□□□□□ -1.04
HPS4-212ENST00000481910 MLST8Q9BVC4 326 aa8.58□□□□□ -1.04
HPS4-212ENST00000481910 GNG13Q9P2W3 67 aa8.58□□□□□ -1.04
HPS4-212ENST00000481910 PAGE4O60829 102 aa8.58□□□□□ -1.04
HPS4-212ENST00000481910 DEFB1P60022 68 aa8.58□□□□□ -1.04
HPS4-212ENST00000481910 RASL11AQ6T310 242 aa8.58□□□□□ -1.04
HPS4-212ENST00000481910 NOTCH1P46531 2555 aa8.58□□□□□ -1.04
HPS4-212ENST00000481910 AGRNO00468 2067 aa8.57□□□□□ -1.04
HPS4-212ENST00000481910 F6UB75 175 aa8.57□□□□□ -1.04
HPS4-212ENST00000481910 SERF1AO75920 110 aa8.57□□□□□ -1.04
HPS4-212ENST00000481910 CSN1S1P47710 185 aa8.57□□□□□ -1.04
HPS4-212ENST00000481910 LINC00336Q6ZUF6 198 aa8.57□□□□□ -1.04
HPS4-212ENST00000481910 MRPL53Q96EL3 112 aaKnown RBP8.57□□□□□ -1.04
HPS4-212ENST00000481910 LOC102723971A0A1B0GUV8 181 aa8.56□□□□□ -1.04
HPS4-212ENST00000481910 KNCNA6PVL3 124 aa8.56□□□□□ -1.04
HPS4-212ENST00000481910 GGTLC3B5MD39 225 aa8.56□□□□□ -1.04
HPS4-212ENST00000481910 H3BUT2 72 aa8.56□□□□□ -1.04
HPS4-212ENST00000481910 SLC25A5P05141 298 aaKnown RBP8.56□□□□□ -1.04
HPS4-212ENST00000481910 XGP55808 180 aa8.56□□□□□ -1.04
HPS4-212ENST00000481910 GDF5OSQ5U4N7 250 aa8.56□□□□□ -1.04
HPS4-212ENST00000481910 EBLN2Q6P2I7 272 aa8.56□□□□□ -1.04
HPS4-212ENST00000481910 BAGE3Q86Y29 109 aa8.56□□□□□ -1.04
HPS4-212ENST00000481910 BAGE2Q86Y30 109 aa8.56□□□□□ -1.04
HPS4-212ENST00000481910 PRAC2D3DTV9 90 aa8.56□□□□□ -1.04
HPS4-212ENST00000481910 ARL2-SNX15V9GYD0 113 aa8.56□□□□□ -1.04
HPS4-212ENST00000481910 A0A0J9YX75 114 aa8.55□□□□□ -1.04
HPS4-212ENST00000481910 C3orf79P0CE67 100 aa8.55□□□□□ -1.04
HPS4-212ENST00000481910 ATP5G3P48201 142 aa8.55□□□□□ -1.04
HPS4-212ENST00000481910 STHQ8IWL8 128 aa8.55□□□□□ -1.04
HPS4-212ENST00000481910 OR8A1Q8NGG7 326 aa8.55□□□□□ -1.04
HPS4-212ENST00000481910 OR10J6PQ8NGY7 276 aa8.55□□□□□ -1.04
HPS4-212ENST00000481910 NAA38Q9BRA0 125 aaKnown RBP8.55□□□□□ -1.04
HPS4-212ENST00000481910 EPDR1Q9UM22 224 aa8.55□□□□□ -1.04
HPS4-212ENST00000481910 C11orf94C9JXX5 98 aa8.54□□□□□ -1.04
HPS4-212ENST00000481910 IGHV4-30-4P0DP06 118 aa8.54□□□□□ -1.04
HPS4-212ENST00000481910 TP53TG3Q9ULZ0 132 aa8.54□□□□□ -1.04
HPS4-212ENST00000481910 IGKV2-40A0A087WW87 121 aaPredicted RBP8.54□□□□□ -1.04
HPS4-212ENST00000481910 H3BMM0 161 aa8.54□□□□□ -1.04
HPS4-212ENST00000481910 K7EIL1 84 aa8.54□□□□□ -1.04
HPS4-212ENST00000481910 IGKV2D-40P01614 121 aaPredicted RBP8.54□□□□□ -1.04
HPS4-212ENST00000481910 IGKV3-20P01619 116 aa8.54□□□□□ -1.04
HPS4-212ENST00000481910 BCL2P10415 239 aa8.54□□□□□ -1.04
HPS4-212ENST00000481910 HLA-DRB4P13762 266 aa8.54□□□□□ -1.04
HPS4-212ENST00000481910 LINC00310P59036 64 aa8.54□□□□□ -1.04
HPS4-212ENST00000481910 DEFB121Q5J5C9 76 aa8.54□□□□□ -1.04
HPS4-212ENST00000481910 SPATA12Q7Z6I5 190 aa8.54□□□□□ -1.04
HPS4-212ENST00000481910 RASL10AQ92737 203 aa8.54□□□□□ -1.04
HPS4-212ENST00000481910 LINC01587Q99440 93 aa8.54□□□□□ -1.04
HPS4-212ENST00000481910 TP53TG1Q9Y2A0 90 aa8.54□□□□□ -1.04
HPS4-212ENST00000481910 HLA-DRB4X5D2U9 266 aa8.54□□□□□ -1.04
HPS4-212ENST00000481910 NBEAL1Q6ZS30 2694 aa8.54□□□□□ -1.04
HPS4-212ENST00000481910 PRSS29PA6NIE9 313 aa8.53□□□□□ -1.04
HPS4-212ENST00000481910 DUSP14O95147 198 aaKnown RBP8.53□□□□□ -1.04
HPS4-212ENST00000481910 TCRAP04437 139 aa8.53□□□□□ -1.04
HPS4-212ENST00000481910 GCSHP23434 173 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms