RNA–Protein interactions for RNA: ENST00000481019.5

PTPRF-213, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 459 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-213ENST00000481019 LYZL1Q6UWQ5 148 aa8.62□□□□□ -1.03
PTPRF-213ENST00000481019 ZNF493Q6ZR52 646 aa8.62□□□□□ -1.03
PTPRF-213ENST00000481019 LINC00612Q8N6U2 182 aa8.62□□□□□ -1.03
PTPRF-213ENST00000481019 SYT8Q8NBV8 401 aa8.62□□□□□ -1.03
PTPRF-213ENST00000481019 TIMM8BQ9Y5J9 83 aaPredicted RBP8.62□□□□□ -1.03
PTPRF-213ENST00000481019 TEX48A0A1B0GUV7 120 aa8.61□□□□□ -1.03
PTPRF-213ENST00000481019 ARMS2P0C7Q2 107 aa8.61□□□□□ -1.03
PTPRF-213ENST00000481019 TRGC1P0CF51 173 aa8.61□□□□□ -1.03
PTPRF-213ENST00000481019 RAB4BP61018 213 aa8.61□□□□□ -1.03
PTPRF-213ENST00000481019 RAB5BP61020 215 aa8.61□□□□□ -1.03
PTPRF-213ENST00000481019 Q6ZTI0 123 aa8.61□□□□□ -1.03
PTPRF-213ENST00000481019 SPXQ9BT56 116 aa8.61□□□□□ -1.03
PTPRF-213ENST00000481019 NDUFAF3Q9BU61 184 aa8.61□□□□□ -1.03
PTPRF-213ENST00000481019 C11orf21Q9P2W6 132 aa8.61□□□□□ -1.03
PTPRF-213ENST00000481019 TRAPPC1Q9Y5R8 145 aa8.61□□□□□ -1.03
PTPRF-213ENST00000481019 GAGE12BA1L429 117 aa8.6□□□□□ -1.03
PTPRF-213ENST00000481019 GAGE7O76087 117 aa8.6□□□□□ -1.03
PTPRF-213ENST00000481019 GAGE12FP0CL80 117 aa8.6□□□□□ -1.03
PTPRF-213ENST00000481019 GAGE12GP0CL81 117 aa8.6□□□□□ -1.03
PTPRF-213ENST00000481019 GAGE12IP0CL82 117 aa8.6□□□□□ -1.03
PTPRF-213ENST00000481019 ZNF415Q09FC8 603 aa8.6□□□□□ -1.03
PTPRF-213ENST00000481019 TWIST1Q15672 202 aa8.6□□□□□ -1.03
PTPRF-213ENST00000481019 PIK3CD-AS1Q5SR53 167 aa8.6□□□□□ -1.03
PTPRF-213ENST00000481019 MRPL54Q6P161 138 aaKnown RBP8.6□□□□□ -1.03
PTPRF-213ENST00000481019 ZFP82Q8N141 532 aa8.6□□□□□ -1.03
PTPRF-213ENST00000481019 MDFICQ9P1T7 246 aa8.6□□□□□ -1.03
PTPRF-213ENST00000481019 IGHV3-16A0A0C4DH30 117 aa8.59□□□□□ -1.03
PTPRF-213ENST00000481019 A0A1B0GXF2 115 aa8.59□□□□□ -1.03
PTPRF-213ENST00000481019 SNURFLB1AK76 121 aa8.59□□□□□ -1.03
PTPRF-213ENST00000481019 GNRH2O43555 120 aa8.59□□□□□ -1.03
PTPRF-213ENST00000481019 SPINK4O60575 86 aa8.59□□□□□ -1.03
PTPRF-213ENST00000481019 HOXA5P20719 270 aa8.59□□□□□ -1.03
PTPRF-213ENST00000481019 NTF3P20783 257 aa8.59□□□□□ -1.03
PTPRF-213ENST00000481019 CAMPP49913 170 aa8.59□□□□□ -1.03
PTPRF-213ENST00000481019 DAZ2Q13117 558 aaKnown RBP8.59□□□□□ -1.03
PTPRF-213ENST00000481019 LGALS9CQ6DKI2 356 aa8.59□□□□□ -1.03
PTPRF-213ENST00000481019 FRZBQ92765 325 aa8.59□□□□□ -1.03
PTPRF-213ENST00000481019 PTH2Q96A98 100 aa8.59□□□□□ -1.03
PTPRF-213ENST00000481019 SCRT2Q9NQ03 307 aa8.59□□□□□ -1.03
PTPRF-213ENST00000481019 BIRC6Q9NR09 4857 aa8.58□□□□□ -1.04
PTPRF-213ENST00000481019 H3BVH4 76 aa8.58□□□□□ -1.04
PTPRF-213ENST00000481019 APCSP02743 223 aa8.58□□□□□ -1.04
PTPRF-213ENST00000481019 SMIM17P0DL12 118 aa8.58□□□□□ -1.04
PTPRF-213ENST00000481019 GATD1Q8NB37 220 aa8.58□□□□□ -1.04
PTPRF-213ENST00000481019 TMEM191AQ9H0A3 160 aa8.58□□□□□ -1.04
PTPRF-213ENST00000481019 MRPL16Q9NX20 251 aaKnown RBP8.58□□□□□ -1.04
PTPRF-213ENST00000481019 F5H768 121 aa8.57□□□□□ -1.04
PTPRF-213ENST00000481019 RNASE3P12724 160 aaKnown RBP8.57□□□□□ -1.04
PTPRF-213ENST00000481019 TCTAP57738 103 aa8.57□□□□□ -1.04
PTPRF-213ENST00000481019 FABP9Q0Z7S8 132 aa8.57□□□□□ -1.04
PTPRF-213ENST00000481019 C9orf85Q96MD7 179 aa8.57□□□□□ -1.04
PTPRF-213ENST00000481019 AP1S3Q96PC3 154 aa8.57□□□□□ -1.04
PTPRF-213ENST00000481019 TRGV1A0A0A0MS02 117 aa8.56□□□□□ -1.04
PTPRF-213ENST00000481019 M0R2P5 195 aa8.56□□□□□ -1.04
PTPRF-213ENST00000481019 PPBPP02775 128 aa8.56□□□□□ -1.04
PTPRF-213ENST00000481019 TRGC2P03986 189 aa8.56□□□□□ -1.04
PTPRF-213ENST00000481019 ATP5G1P05496 136 aa8.56□□□□□ -1.04
PTPRF-213ENST00000481019 TMEM136Q6ZRR5 245 aa8.56□□□□□ -1.04
PTPRF-213ENST00000481019 ZNF575Q86XF7 245 aa8.56□□□□□ -1.04
PTPRF-213ENST00000481019 MRPL18Q9H0U6 180 aaKnown RBP8.56□□□□□ -1.04
PTPRF-213ENST00000481019 M0R381 172 aa8.55□□□□□ -1.04
PTPRF-213ENST00000481019 CIDEAO60543 219 aa8.55□□□□□ -1.04
PTPRF-213ENST00000481019 NXPH4O95158 308 aa8.55□□□□□ -1.04
PTPRF-213ENST00000481019 PPP1R17O96001 155 aa8.55□□□□□ -1.04
PTPRF-213ENST00000481019 LGALS9BQ3B8N2 356 aa8.55□□□□□ -1.04
PTPRF-213ENST00000481019 OR10AG1Q8NH19 301 aa8.55□□□□□ -1.04
PTPRF-213ENST00000481019 DNAH11Q96DT5 4516 aa8.55□□□□□ -1.04
PTPRF-213ENST00000481019 HECTD4Q9Y4D8 3996 aa8.55□□□□□ -1.04
PTPRF-213ENST00000481019 A8MWV9 139 aa8.54□□□□□ -1.04
PTPRF-213ENST00000481019 IGHV3-53P01767 116 aa8.54□□□□□ -1.04
PTPRF-213ENST00000481019 S100A6P06703 90 aa8.54□□□□□ -1.04
PTPRF-213ENST00000481019 ZNF876PQ49A33 203 aa8.54□□□□□ -1.04
PTPRF-213ENST00000481019 FAM104BQ5XKR9 115 aa8.54□□□□□ -1.04
PTPRF-213ENST00000481019 DPH3P1Q9H4G8 78 aa8.54□□□□□ -1.04
PTPRF-213ENST00000481019 A0A0J9YY99 117 aa8.53□□□□□ -1.04
PTPRF-213ENST00000481019 SSTP61278 116 aa8.53□□□□□ -1.04
PTPRF-213ENST00000481019 DMRTA1Q5VZB9 504 aa8.53□□□□□ -1.04
PTPRF-213ENST00000481019 POM121L12Q8N7R1 296 aa8.53□□□□□ -1.04
PTPRF-213ENST00000481019 LAMTOR2Q9Y2Q5 125 aa8.53□□□□□ -1.04
PTPRF-213ENST00000481019 PKD1P98161 4303 aa8.53□□□□□ -1.04
PTPRF-213ENST00000481019 MUC4Q99102 2169 aa8.52□□□□□ -1.04
PTPRF-213ENST00000481019 TRGV2A0A075B6R0 118 aa8.52□□□□□ -1.05
PTPRF-213ENST00000481019 TRAV26-1A0A087WT03 109 aa8.52□□□□□ -1.05
PTPRF-213ENST00000481019 ORMDL3Q8N138 153 aa8.52□□□□□ -1.05
PTPRF-213ENST00000481019 RASL10AQ92737 203 aa8.52□□□□□ -1.05
PTPRF-213ENST00000481019 VSIG2Q96IQ7 327 aa8.52□□□□□ -1.05
PTPRF-213ENST00000481019 C18orf15Q96N68 181 aa8.52□□□□□ -1.05
PTPRF-213ENST00000481019 NACAE9PAV3 2078 aa8.52□□□□□ -1.05
PTPRF-213ENST00000481019 MUC21A0A0G2JKD1 596 aa8.51□□□□□ -1.05
PTPRF-213ENST00000481019 MUC21A0A140T8X8 626 aa8.51□□□□□ -1.05
PTPRF-213ENST00000481019 RHODO00212 210 aa8.51□□□□□ -1.05
PTPRF-213ENST00000481019 NUDT3O95989 172 aa8.51□□□□□ -1.05
PTPRF-213ENST00000481019 CKS2P33552 79 aa8.51□□□□□ -1.05
PTPRF-213ENST00000481019 MRAP2Q96G30 205 aa8.51□□□□□ -1.05
PTPRF-213ENST00000481019 DYNC1H1Q14204 4646 aaKnown RBP8.51□□□□□ -1.05
PTPRF-213ENST00000481019 H7C1H1 209 aa8.5□□□□□ -1.05
PTPRF-213ENST00000481019 P0DMU3 169 aa8.5□□□□□ -1.05
PTPRF-213ENST00000481019 FAM231AP0DMU4 169 aa8.5□□□□□ -1.05
PTPRF-213ENST00000481019 FAM231CP0DMU5 169 aa8.5□□□□□ -1.05
PTPRF-213ENST00000481019 RAB4AP20338 218 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms