RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 ZFP2Q6ZN57 461 aa4.77□□□□□ -1.65
COL17A1-205ENST00000480127 Q6ZSN1 163 aa4.77□□□□□ -1.65
COL17A1-205ENST00000480127 ZFP82Q8N141 532 aa4.77□□□□□ -1.65
COL17A1-205ENST00000480127 FAM213BQ8TBF2 198 aa4.77□□□□□ -1.65
COL17A1-205ENST00000480127 SFT2D1Q8WV19 159 aa4.77□□□□□ -1.65
COL17A1-205ENST00000480127 RPL36ALQ969Q0 106 aaKnown RBP4.77□□□□□ -1.65
COL17A1-205ENST00000480127 C9orf85Q96MD7 179 aa4.77□□□□□ -1.65
COL17A1-205ENST00000480127 PARLQ9H300 379 aa4.77□□□□□ -1.65
COL17A1-205ENST00000480127 ZFP30Q9Y2G7 519 aa4.77□□□□□ -1.65
COL17A1-205ENST00000480127 COX11Q9Y6N1 276 aa4.77□□□□□ -1.65
COL17A1-205ENST00000480127 KANTRA0A1W2PQU2 76 aa4.76□□□□□ -1.65
COL17A1-205ENST00000480127 FAM74A7A6NL05 159 aa4.76□□□□□ -1.65
COL17A1-205ENST00000480127 ARMS2P0C7Q2 107 aa4.76□□□□□ -1.65
COL17A1-205ENST00000480127 RNASE3P12724 160 aaKnown RBP4.76□□□□□ -1.65
COL17A1-205ENST00000480127 EIF5AP63241 154 aaKnown RBP4.76□□□□□ -1.65
COL17A1-205ENST00000480127 LAGE3Q14657 143 aa4.76□□□□□ -1.65
COL17A1-205ENST00000480127 ELOBQ15370 118 aa4.76□□□□□ -1.65
COL17A1-205ENST00000480127 SPANXN1Q5VSR9 72 aa4.76□□□□□ -1.65
COL17A1-205ENST00000480127 PRR27Q6MZM9 219 aa4.76□□□□□ -1.65
COL17A1-205ENST00000480127 DPPA3Q6W0C5 159 aa4.76□□□□□ -1.65
COL17A1-205ENST00000480127 Q8N814 137 aa4.76□□□□□ -1.65
COL17A1-205ENST00000480127 UBE2WQ96B02 151 aa4.76□□□□□ -1.65
COL17A1-205ENST00000480127 ZC2HC1AQ96GY0 325 aa4.76□□□□□ -1.65
COL17A1-205ENST00000480127 TPPP3Q9BW30 176 aa4.76□□□□□ -1.65
COL17A1-205ENST00000480127 IL36BQ9NZH7 164 aa4.76□□□□□ -1.65
COL17A1-205ENST00000480127 C11orf21Q9P2W6 132 aa4.76□□□□□ -1.65
COL17A1-205ENST00000480127 TEX46H3BTG2 121 aa4.75□□□□□ -1.65
COL17A1-205ENST00000480127 PLA2G1BP04054 148 aaKnown RBP4.75□□□□□ -1.65
COL17A1-205ENST00000480127 Q5BKY6 102 aa4.75□□□□□ -1.65
COL17A1-205ENST00000480127 DAZ4Q86SG3 579 aaKnown RBP4.75□□□□□ -1.65
COL17A1-205ENST00000480127 C14orf178Q8N769 122 aaPredicted RBP4.75□□□□□ -1.65
COL17A1-205ENST00000480127 DAZAP1Q96EP5 407 aaKnown RBP4.75□□□□□ -1.65
COL17A1-205ENST00000480127 TCEAL7Q9BRU2 100 aa4.75□□□□□ -1.65
COL17A1-205ENST00000480127 CHCHD5Q9BSY4 110 aa4.75□□□□□ -1.65
COL17A1-205ENST00000480127 TMEM70Q9BUB7 260 aa4.75□□□□□ -1.65
COL17A1-205ENST00000480127 ZNF471Q9BX82 626 aaPredicted RBP4.75□□□□□ -1.65
COL17A1-205ENST00000480127 JPT2Q9H910 190 aa4.75□□□□□ -1.65
COL17A1-205ENST00000480127 DAZ3Q9NR90 486 aaKnown RBP4.75□□□□□ -1.65
COL17A1-205ENST00000480127 KLK12Q9UKR0 248 aa4.75□□□□□ -1.65
COL17A1-205ENST00000480127 KRTAP29-1A8MX34 341 aaPredicted RBP4.74□□□□□ -1.65
COL17A1-205ENST00000480127 KRBOX1C9JBD0 128 aa4.74□□□□□ -1.65
COL17A1-205ENST00000480127 PAGE4O60829 102 aa4.74□□□□□ -1.65
COL17A1-205ENST00000480127 IGLV2-11P01706 119 aa4.74□□□□□ -1.65
COL17A1-205ENST00000480127 S100A9P06702 114 aaKnown RBP4.74□□□□□ -1.65
COL17A1-205ENST00000480127 MGPP08493 103 aa4.74□□□□□ -1.65
COL17A1-205ENST00000480127 PIK3CD-AS1Q5SR53 167 aa4.74□□□□□ -1.65
COL17A1-205ENST00000480127 KCNRGQ8N5I3 272 aa4.74□□□□□ -1.65
COL17A1-205ENST00000480127 Q8N976 141 aa4.74□□□□□ -1.65
COL17A1-205ENST00000480127 SUN5Q8TC36 379 aa4.74□□□□□ -1.65
COL17A1-205ENST00000480127 BAALCQ8WXS3 180 aa4.74□□□□□ -1.65
COL17A1-205ENST00000480127 PTH2Q96A98 100 aa4.74□□□□□ -1.65
COL17A1-205ENST00000480127 C1orf43Q9BWL3 253 aa4.74□□□□□ -1.65
COL17A1-205ENST00000480127 IGKV3D-20A0A0C4DH25 116 aa4.73□□□□□ -1.65
COL17A1-205ENST00000480127 MUC21A0A0G2JKD1 596 aa4.73□□□□□ -1.65
COL17A1-205ENST00000480127 MUC21A0A140T8X8 626 aa4.73□□□□□ -1.65
COL17A1-205ENST00000480127 RNF222A6NCQ9 220 aa4.73□□□□□ -1.65
COL17A1-205ENST00000480127 UMAD1C9J7I0 102 aa4.73□□□□□ -1.65
COL17A1-205ENST00000480127 HLA-DQA1P01909 254 aa4.73□□□□□ -1.65
COL17A1-205ENST00000480127 ANGP03950 147 aaKnown RBP4.73□□□□□ -1.65
COL17A1-205ENST00000480127 H2AFB1P0C5Y9 115 aa4.73□□□□□ -1.65
COL17A1-205ENST00000480127 PKIAP61925 76 aa4.73□□□□□ -1.65
COL17A1-205ENST00000480127 Q0VG73 95 aa4.73□□□□□ -1.65
COL17A1-205ENST00000480127 ZNF726P1Q15940 193 aa4.73□□□□□ -1.65
COL17A1-205ENST00000480127 C14orf177Q52M58 125 aa4.73□□□□□ -1.65
COL17A1-205ENST00000480127 BAGE2Q86Y30 109 aa4.73□□□□□ -1.65
COL17A1-205ENST00000480127 C15orf54Q8N8G6 183 aa4.73□□□□□ -1.65
COL17A1-205ENST00000480127 SAMD10Q9BYL1 202 aa4.73□□□□□ -1.65
COL17A1-205ENST00000480127 TRBV7-3A0A075B6L6 115 aa4.72□□□□□ -1.65
COL17A1-205ENST00000480127 TRBV10-1A0A0K0K1A3 114 aa4.72□□□□□ -1.65
COL17A1-205ENST00000480127 XKRY2A2RUG3 117 aa4.72□□□□□ -1.65
COL17A1-205ENST00000480127 SMLR1H3BR10 107 aa4.72□□□□□ -1.65
COL17A1-205ENST00000480127 FHITP49789 147 aa4.72□□□□□ -1.65
COL17A1-205ENST00000480127 EIF5AL1Q6IS14 154 aaKnown RBP4.72□□□□□ -1.65
COL17A1-205ENST00000480127 Q8N3U1 123 aa4.72□□□□□ -1.65
COL17A1-205ENST00000480127 DPH3Q96FX2 82 aa4.72□□□□□ -1.65
COL17A1-205ENST00000480127 SFRP2Q96HF1 295 aa4.72□□□□□ -1.65
COL17A1-205ENST00000480127 AP1S3Q96PC3 154 aa4.72□□□□□ -1.65
COL17A1-205ENST00000480127 FAM30AQ9NZY2 134 aa4.72□□□□□ -1.65
COL17A1-205ENST00000480127 GNG13Q9P2W3 67 aa4.72□□□□□ -1.65
COL17A1-205ENST00000480127 HMCN2Q8NDA2 5059 aa4.72□□□□□ -1.65
COL17A1-205ENST00000480127 A0A0D9SG52 128 aa4.71□□□□□ -1.66
COL17A1-205ENST00000480127 SCO2A0A1W2PP80 73 aa4.71□□□□□ -1.66
COL17A1-205ENST00000480127 LRCOL1A6NCL2 159 aa4.71□□□□□ -1.66
COL17A1-205ENST00000480127 UBE2L6O14933 153 aa4.71□□□□□ -1.66
COL17A1-205ENST00000480127 LTAP01374 205 aa4.71□□□□□ -1.66
COL17A1-205ENST00000480127 IFNA1P01562 189 aa4.71□□□□□ -1.66
COL17A1-205ENST00000480127 RAB4BP61018 213 aa4.71□□□□□ -1.66
COL17A1-205ENST00000480127 RPL19P84098 196 aaKnown RBP4.71□□□□□ -1.66
COL17A1-205ENST00000480127 LINC01559Q495D7 138 aa4.71□□□□□ -1.66
COL17A1-205ENST00000480127 SERTAD4-AS1Q5TG53 156 aa4.71□□□□□ -1.66
COL17A1-205ENST00000480127 NIT1Q86X76 327 aa4.71□□□□□ -1.66
COL17A1-205ENST00000480127 MANBALQ9NQG1 85 aa4.71□□□□□ -1.66
COL17A1-205ENST00000480127 H7C1H1 209 aa4.7□□□□□ -1.66
COL17A1-205ENST00000480127 BCL2L11O43521 198 aa4.7□□□□□ -1.66
COL17A1-205ENST00000480127 GNG4P50150 75 aa4.7□□□□□ -1.66
COL17A1-205ENST00000480127 ZNF674Q2M3X9 581 aa4.7□□□□□ -1.66
COL17A1-205ENST00000480127 LINC01620Q4KN68 170 aa4.7□□□□□ -1.66
COL17A1-205ENST00000480127 TMEM97Q5BJF2 176 aa4.7□□□□□ -1.66
COL17A1-205ENST00000480127 CLPSL2Q6UWE3 100 aa4.7□□□□□ -1.66
COL17A1-205ENST00000480127 LINC00528Q8N1L1 170 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms