RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 TPPP3Q9BW30 176 aa7.52□□□□□ -1.21
ATG4B-219ENST00000479941 JPT2Q9H910 190 aa7.52□□□□□ -1.21
ATG4B-219ENST00000479941 NAT8Q9UHE5 227 aa7.52□□□□□ -1.21
ATG4B-219ENST00000479941 CRYGDP07320 174 aa7.51□□□□□ -1.21
ATG4B-219ENST00000479941 GYPEP15421 78 aa7.51□□□□□ -1.21
ATG4B-219ENST00000479941 SRIP30626 198 aa7.51□□□□□ -1.21
ATG4B-219ENST00000479941 CACNG7P62955 275 aa7.51□□□□□ -1.21
ATG4B-219ENST00000479941 CT83Q5H943 113 aa7.51□□□□□ -1.21
ATG4B-219ENST00000479941 FAM74A4Q5TZK3 123 aa7.51□□□□□ -1.21
ATG4B-219ENST00000479941 PRADC1Q9BSG0 188 aa7.51□□□□□ -1.21
ATG4B-219ENST00000479941 SAMD10Q9BYL1 202 aa7.51□□□□□ -1.21
ATG4B-219ENST00000479941 DNAH17Q9UFH2 4485 aa7.5□□□□□ -1.21
ATG4B-219ENST00000479941 A0A087WWL8 130 aa7.5□□□□□ -1.21
ATG4B-219ENST00000479941 A8MWL6 223 aa7.5□□□□□ -1.21
ATG4B-219ENST00000479941 RPL23P62829 140 aaKnown RBP7.5□□□□□ -1.21
ATG4B-219ENST00000479941 ESRGQ1W209 222 aa7.5□□□□□ -1.21
ATG4B-219ENST00000479941 WDR73Q6P4I2 378 aa7.5□□□□□ -1.21
ATG4B-219ENST00000479941 LYZL1Q6UWQ5 148 aa7.5□□□□□ -1.21
ATG4B-219ENST00000479941 NEGR1Q7Z3B1 354 aa7.5□□□□□ -1.21
ATG4B-219ENST00000479941 SH2D6Q7Z4S9 175 aa7.5□□□□□ -1.21
ATG4B-219ENST00000479941 OSTCQ9NRP0 149 aa7.5□□□□□ -1.21
ATG4B-219ENST00000479941 LINC00588Q9Y4M8 146 aa7.5□□□□□ -1.21
ATG4B-219ENST00000479941 MUC21A0A0G2JKD1 596 aa7.49□□□□□ -1.21
ATG4B-219ENST00000479941 MUC21A0A140T8X8 626 aa7.49□□□□□ -1.21
ATG4B-219ENST00000479941 SMIM17P0DL12 118 aa7.49□□□□□ -1.21
ATG4B-219ENST00000479941 CTRLP40313 264 aa7.49□□□□□ -1.21
ATG4B-219ENST00000479941 SSTP61278 116 aa7.49□□□□□ -1.21
ATG4B-219ENST00000479941 C15orf54Q8N8G6 183 aa7.49□□□□□ -1.21
ATG4B-219ENST00000479941 ISOC2Q96AB3 205 aa7.49□□□□□ -1.21
ATG4B-219ENST00000479941 AP1S3Q96PC3 154 aa7.49□□□□□ -1.21
ATG4B-219ENST00000479941 CNFNQ9BYD5 112 aa7.49□□□□□ -1.21
ATG4B-219ENST00000479941 FAM231BA6NCW3 169 aa7.48□□□□□ -1.21
ATG4B-219ENST00000479941 FOXA3P55318 350 aaPredicted RBP7.48□□□□□ -1.21
ATG4B-219ENST00000479941 ADIRFQ15847 76 aa7.48□□□□□ -1.21
ATG4B-219ENST00000479941 LYPD5Q6UWN5 251 aa7.48□□□□□ -1.21
ATG4B-219ENST00000479941 Q6ZSN1 163 aa7.48□□□□□ -1.21
ATG4B-219ENST00000479941 C14orf178Q8N769 122 aaPredicted RBP7.48□□□□□ -1.21
ATG4B-219ENST00000479941 TSKUQ8WUA8 353 aa7.48□□□□□ -1.21
ATG4B-219ENST00000479941 GTSF1Q8WW33 167 aa7.48□□□□□ -1.21
ATG4B-219ENST00000479941 UPK3BQ9BT76 320 aa7.48□□□□□ -1.21
ATG4B-219ENST00000479941 GFRA4Q9GZZ7 299 aa7.48□□□□□ -1.21
ATG4B-219ENST00000479941 MRPS16Q9Y3D3 137 aaKnown RBP7.48□□□□□ -1.21
ATG4B-219ENST00000479941 TRBV10-1A0A0K0K1A3 114 aa7.47□□□□□ -1.21
ATG4B-219ENST00000479941 LOC100131303A0A0U1RQF7 123 aa7.47□□□□□ -1.21
ATG4B-219ENST00000479941 TRGC1P0CF51 173 aa7.47□□□□□ -1.21
ATG4B-219ENST00000479941 NTF3P20783 257 aa7.47□□□□□ -1.21
ATG4B-219ENST00000479941 RAB4BP61018 213 aa7.47□□□□□ -1.21
ATG4B-219ENST00000479941 UQCC3Q6UW78 93 aa7.47□□□□□ -1.21
ATG4B-219ENST00000479941 ZNRF2Q8NHG8 242 aa7.47□□□□□ -1.21
ATG4B-219ENST00000479941 MSRB1Q9NZV6 116 aa7.47□□□□□ -1.21
ATG4B-219ENST00000479941 KIF25-AS1Q9Y6Z4 181 aa7.47□□□□□ -1.21
ATG4B-219ENST00000479941 EPPK1P58107 5090 aaKnown RBP7.47□□□□□ -1.21
ATG4B-219ENST00000479941 TIRAPP58753 221 aa7.46□□□□□ -1.22
ATG4B-219ENST00000479941 TWIST1Q15672 202 aa7.46□□□□□ -1.22
ATG4B-219ENST00000479941 ZNF56Q15929 161 aa7.46□□□□□ -1.22
ATG4B-219ENST00000479941 OR10G8Q8NGN5 311 aa7.46□□□□□ -1.22
ATG4B-219ENST00000479941 Q9H8V8 135 aa7.46□□□□□ -1.22
ATG4B-219ENST00000479941 V9GYV3 84 aa7.46□□□□□ -1.22
ATG4B-219ENST00000479941 FRAS1Q86XX4 4008 aa7.46□□□□□ -1.22
ATG4B-219ENST00000479941 FAT2Q9NYQ8 4349 aa7.46□□□□□ -1.22
ATG4B-219ENST00000479941 IGLV2-18A0A075B6J9 118 aa7.45□□□□□ -1.22
ATG4B-219ENST00000479941 GAGE12JA6NER3 117 aa7.45□□□□□ -1.22
ATG4B-219ENST00000479941 HIGD1CA8MV81 97 aa7.45□□□□□ -1.22
ATG4B-219ENST00000479941 F5H697 171 aa7.45□□□□□ -1.22
ATG4B-219ENST00000479941 LINC00315P59091 139 aa7.45□□□□□ -1.22
ATG4B-219ENST00000479941 PNRC1Q12796 327 aaPredicted RBP7.45□□□□□ -1.22
ATG4B-219ENST00000479941 GAGE1Q13065 139 aa7.45□□□□□ -1.22
ATG4B-219ENST00000479941 GAGE4Q13068 117 aa7.45□□□□□ -1.22
ATG4B-219ENST00000479941 GAGE5Q13069 117 aa7.45□□□□□ -1.22
ATG4B-219ENST00000479941 GAGE13Q4V321 117 aa7.45□□□□□ -1.22
ATG4B-219ENST00000479941 ATP6V0E2Q8NHE4 81 aa7.45□□□□□ -1.22
ATG4B-219ENST00000479941 BORCS7Q96B45 105 aa7.45□□□□□ -1.22
ATG4B-219ENST00000479941 PGLYRP4Q96LB8 373 aa7.45□□□□□ -1.22
ATG4B-219ENST00000479941 DPH3P1Q9H4G8 78 aa7.45□□□□□ -1.22
ATG4B-219ENST00000479941 LINC00694P0DN24 101 aa7.44□□□□□ -1.22
ATG4B-219ENST00000479941 EVI2AP22794 236 aa7.44□□□□□ -1.22
ATG4B-219ENST00000479941 RPL36AP83881 106 aaKnown RBP7.44□□□□□ -1.22
ATG4B-219ENST00000479941 SMIM15Q7Z3B0 74 aa7.44□□□□□ -1.22
ATG4B-219ENST00000479941 RPL36ALQ969Q0 106 aaKnown RBP7.44□□□□□ -1.22
ATG4B-219ENST00000479941 GTSF1LQ9H1H1 148 aa7.44□□□□□ -1.22
ATG4B-219ENST00000479941 NBDYA0A0U1RRE5 68 aa7.43□□□□□ -1.22
ATG4B-219ENST00000479941 A0A1B0GUT8 65 aa7.43□□□□□ -1.22
ATG4B-219ENST00000479941 TMEM218A2RU14 115 aa7.43□□□□□ -1.22
ATG4B-219ENST00000479941 H7C1H1 209 aa7.43□□□□□ -1.22
ATG4B-219ENST00000479941 M0R2N4 97 aa7.43□□□□□ -1.22
ATG4B-219ENST00000479941 SIVA1O15304 175 aa7.43□□□□□ -1.22
ATG4B-219ENST00000479941 Q6ZR54 194 aa7.43□□□□□ -1.22
ATG4B-219ENST00000479941 Q9UF83 564 aa7.43□□□□□ -1.22
ATG4B-219ENST00000479941 NAT8BQ9UHF3 227 aa7.43□□□□□ -1.22
ATG4B-219ENST00000479941 TRBV7-3A0A075B6L6 115 aa7.42□□□□□ -1.22
ATG4B-219ENST00000479941 LINC00862A6NCI5 91 aa7.42□□□□□ -1.22
ATG4B-219ENST00000479941 PPP1R2P9O14990 202 aa7.42□□□□□ -1.22
ATG4B-219ENST00000479941 MGPP08493 103 aa7.42□□□□□ -1.22
ATG4B-219ENST00000479941 TTC32Q5I0X7 151 aa7.42□□□□□ -1.22
ATG4B-219ENST00000479941 LELP1Q5T871 98 aa7.42□□□□□ -1.22
ATG4B-219ENST00000479941 COMMD7Q86VX2 200 aa7.42□□□□□ -1.22
ATG4B-219ENST00000479941 NEXN-AS1Q8NBZ9 246 aa7.42□□□□□ -1.22
ATG4B-219ENST00000479941 NUP35Q8NFH5 326 aa7.42□□□□□ -1.22
ATG4B-219ENST00000479941 A0A087WWC5 75 aa7.41□□□□□ -1.22
ATG4B-219ENST00000479941 TRAV8-6A0A0B4J262 113 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms