RNA–Protein interactions for RNA: ENST00000479733.5

COL13A1-208, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 2,934 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-208ENST00000479733 CCL21O00585 134 aa15.59■□□□□ 0.09
COL13A1-208ENST00000479733 FAM74A4Q5TZK3 123 aa15.59■□□□□ 0.09
COL13A1-208ENST00000479733 SLC25A29Q8N8R3 303 aa15.59■□□□□ 0.09
COL13A1-208ENST00000479733 IGHV3-11P01762 117 aa15.58■□□□□ 0.09
COL13A1-208ENST00000479733 A4D1N5 150 aa15.58■□□□□ 0.08
COL13A1-208ENST00000479733 TRAV2A0A0B4J234 112 aa15.57■□□□□ 0.08
COL13A1-208ENST00000479733 J3QQQ9 107 aa15.57■□□□□ 0.08
COL13A1-208ENST00000479733 SLC25A20O43772 301 aa15.57■□□□□ 0.08
COL13A1-208ENST00000479733 LGALS3P17931 250 aaKnown RBP15.57■□□□□ 0.08
COL13A1-208ENST00000479733 AJUBAQ96IF1 538 aa15.57■□□□□ 0.08
COL13A1-208ENST00000479733 SIRPDQ9H106 197 aa15.57■□□□□ 0.08
COL13A1-208ENST00000479733 ERG28Q9UKR5 140 aa15.57■□□□□ 0.08
COL13A1-208ENST00000479733 LENEPQ9Y5L5 61 aa15.57■□□□□ 0.08
COL13A1-208ENST00000479733 SUMO4Q6EEV6 95 aa15.57■□□□□ 0.08
COL13A1-208ENST00000479733 SS18L2Q9UHA2 77 aa15.57■□□□□ 0.08
COL13A1-208ENST00000479733 PTPRQQ9UMZ3 2332 aa15.57■□□□□ 0.08
COL13A1-208ENST00000479733 C1orf122Q6ZSJ8 110 aa15.57■□□□□ 0.08
COL13A1-208ENST00000479733 BEX4Q9NWD9 120 aaPredicted RBP15.57■□□□□ 0.08
COL13A1-208ENST00000479733 SDHAF1A6NFY7 115 aa15.55■□□□□ 0.08
COL13A1-208ENST00000479733 OVOL1O14753 267 aa15.55■□□□□ 0.08
COL13A1-208ENST00000479733 PAPPA-AS1Q5QFB9 102 aa15.55■□□□□ 0.08
COL13A1-208ENST00000479733 ZFAND6Q6FIF0 208 aa15.55■□□□□ 0.08
COL13A1-208ENST00000479733 TEX29Q8N6K0 151 aa15.55■□□□□ 0.08
COL13A1-208ENST00000479733 LINC00315P59091 139 aa15.55■□□□□ 0.08
COL13A1-208ENST00000479733 Q1RN00 199 aa15.55■□□□□ 0.08
COL13A1-208ENST00000479733 PPP1R17O96001 155 aa15.54■□□□□ 0.08
COL13A1-208ENST00000479733 TRAV41A0A0B4J266 112 aa15.54■□□□□ 0.08
COL13A1-208ENST00000479733 EIF4EBP3O60516 100 aaPredicted RBP15.54■□□□□ 0.08
COL13A1-208ENST00000479733 UBE2E1P51965 193 aa15.53■□□□□ 0.08
COL13A1-208ENST00000479733 POLR2KP53803 58 aaKnown RBP15.53■□□□□ 0.08
COL13A1-208ENST00000479733 KIF25-AS1Q9Y6Z4 181 aa15.53■□□□□ 0.08
COL13A1-208ENST00000479733 VCYO14598 125 aa15.53■□□□□ 0.08
COL13A1-208ENST00000479733 IGHV4-39P01824 125 aa15.53■□□□□ 0.08
COL13A1-208ENST00000479733 SBSPONQ8IVN8 264 aa15.53■□□□□ 0.08
COL13A1-208ENST00000479733 AMELXQ99217 191 aa15.53■□□□□ 0.08
COL13A1-208ENST00000479733 IGHV1-69DA0A0B4J2H0 117 aa15.52■□□□□ 0.08
COL13A1-208ENST00000479733 ELANEP08246 267 aa15.52■□□□□ 0.08
COL13A1-208ENST00000479733 C5orf56Q8N8D9 126 aa15.52■□□□□ 0.08
COL13A1-208ENST00000479733 FAM159AQ6UWV7 190 aa15.51■□□□□ 0.07
COL13A1-208ENST00000479733 MUSTN1Q8IVN3 82 aa15.51■□□□□ 0.07
COL13A1-208ENST00000479733 ZNF580Q9UK33 172 aa15.51■□□□□ 0.07
COL13A1-208ENST00000479733 SORL1Q92673 2214 aa15.51■□□□□ 0.07
COL13A1-208ENST00000479733 B5MCH6 92 aa15.51■□□□□ 0.07
COL13A1-208ENST00000479733 SOCS3O14543 225 aa15.51■□□□□ 0.07
COL13A1-208ENST00000479733 ZNF876PQ49A33 203 aa15.51■□□□□ 0.07
COL13A1-208ENST00000479733 NTN5Q8WTR8 489 aaPredicted RBP15.51■□□□□ 0.07
COL13A1-208ENST00000479733 TRAV12-3A0A0B4J271 114 aa15.5■□□□□ 0.07
COL13A1-208ENST00000479733 ADARB2-AS1A8MUL3 147 aa15.5■□□□□ 0.07
COL13A1-208ENST00000479733 TMEM141Q96I45 108 aa15.5■□□□□ 0.07
COL13A1-208ENST00000479733 VCX2Q9H322 139 aa15.5■□□□□ 0.07
COL13A1-208ENST00000479733 IGKV3-20P01619 116 aa15.5■□□□□ 0.07
COL13A1-208ENST00000479733 IGHV3-33P01772 117 aa15.5■□□□□ 0.07
COL13A1-208ENST00000479733 C11orf71Q6IPW1 123 aa15.5■□□□□ 0.07
COL13A1-208ENST00000479733 TMEM262E9PQX1 116 aa15.49■□□□□ 0.07
COL13A1-208ENST00000479733 UBTD1Q9HAC8 227 aa15.49■□□□□ 0.07
COL13A1-208ENST00000479733 CRLF1O75462 422 aa15.49■□□□□ 0.07
COL13A1-208ENST00000479733 EDN2P20800 178 aa15.49■□□□□ 0.07
COL13A1-208ENST00000479733 IGHV4OR15-8A0A075B7B6 117 aa15.48■□□□□ 0.07
COL13A1-208ENST00000479733 A0A087WW49 117 aa15.48■□□□□ 0.07
COL13A1-208ENST00000479733 TRAV4A0A0B4J268 109 aa15.48■□□□□ 0.07
COL13A1-208ENST00000479733 TIMM17AQ99595 171 aa15.48■□□□□ 0.07
COL13A1-208ENST00000479733 ZNF56Q15929 161 aa15.47■□□□□ 0.07
COL13A1-208ENST00000479733 KLK9Q2XQG4 91 aa15.47■□□□□ 0.07
COL13A1-208ENST00000479733 KLK9Q9UKQ9 250 aa15.47■□□□□ 0.07
COL13A1-208ENST00000479733 VPS13CQ709C8 3753 aa15.47■□□□□ 0.07
COL13A1-208ENST00000479733 NPFFO15130 113 aa15.47■□□□□ 0.07
COL13A1-208ENST00000479733 TMEM263Q8WUH6 116 aaKnown RBP15.47■□□□□ 0.07
COL13A1-208ENST00000479733 RHPN1-AS1Q9BWJ2 59 aa15.47■□□□□ 0.07
COL13A1-208ENST00000479733 TEX49A0A1B0GTD5 131 aa15.47■□□□□ 0.07
COL13A1-208ENST00000479733 MED14OSP0DP75 135 aa15.47■□□□□ 0.07
COL13A1-208ENST00000479733 SNCGO76070 127 aa15.46■□□□□ 0.07
COL13A1-208ENST00000479733 NBL1P41271 181 aa15.46■□□□□ 0.07
COL13A1-208ENST00000479733 BRD3OSQ6XYD6 125 aa15.46■□□□□ 0.07
COL13A1-208ENST00000479733 Q8N1Y9 231 aa15.46■□□□□ 0.07
COL13A1-208ENST00000479733 FAM19A4Q96LR4 140 aa15.46■□□□□ 0.07
COL13A1-208ENST00000479733 GAGE2BQ13066 116 aa15.46■□□□□ 0.06
COL13A1-208ENST00000479733 GAGE2EQ4V326 116 aa15.46■□□□□ 0.06
COL13A1-208ENST00000479733 GAGE2DQ9UEU5 116 aa15.46■□□□□ 0.06
COL13A1-208ENST00000479733 IGF2RP11717 2491 aa15.45■□□□□ 0.06
COL13A1-208ENST00000479733 A0A0J9YXV3 536 aa15.45■□□□□ 0.06
COL13A1-208ENST00000479733 A0A1W2PPR1 153 aa15.45■□□□□ 0.06
COL13A1-208ENST00000479733 PRSS2P07478 247 aa15.45■□□□□ 0.06
COL13A1-208ENST00000479733 LY6EQ16553 131 aa15.45■□□□□ 0.06
COL13A1-208ENST00000479733 CREBBPQ92793 2442 aa15.45■□□□□ 0.06
COL13A1-208ENST00000479733 TRAV12-2A0A075B6T6 113 aa15.45■□□□□ 0.06
COL13A1-208ENST00000479733 GAGE5Q13069 117 aa15.45■□□□□ 0.06
COL13A1-208ENST00000479733 GAGE6Q13070 117 aa15.45■□□□□ 0.06
COL13A1-208ENST00000479733 CITED1Q99966 193 aa15.44■□□□□ 0.06
COL13A1-208ENST00000479733 FAM223BA6NKX1 122 aa15.44■□□□□ 0.06
COL13A1-208ENST00000479733 NDUFA4O00483 81 aa15.44■□□□□ 0.06
COL13A1-208ENST00000479733 NHLRC4P0CG21 123 aaPredicted RBP15.44■□□□□ 0.06
COL13A1-208ENST00000479733 FAM223AQ8IWN6 122 aa15.44■□□□□ 0.06
COL13A1-208ENST00000479733 MDFICQ9P1T7 246 aa15.44■□□□□ 0.06
COL13A1-208ENST00000479733 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.44■□□□□ 0.06
COL13A1-208ENST00000479733 TMEM223A0PJW6 202 aa15.44■□□□□ 0.06
COL13A1-208ENST00000479733 PF4V1P10720 104 aa15.44■□□□□ 0.06
COL13A1-208ENST00000479733 POM121L12Q8N7R1 296 aa15.44■□□□□ 0.06
COL13A1-208ENST00000479733 SPXQ9BT56 116 aa15.43■□□□□ 0.06
COL13A1-208ENST00000479733 BPESC1Q9GZL8 116 aa15.43■□□□□ 0.06
COL13A1-208ENST00000479733 TRBV27A0A0K0K1C4 114 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms