RNA–Protein interactions for RNA: ENST00000479712.1

UPF3A-205, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-205ENST00000479712 MS4A6AQ9H2W1 248 aa3.11□□□□□ -1.91
UPF3A-205ENST00000479712 NEBP20929 6669 aa3.1□□□□□ -1.91
UPF3A-205ENST00000479712 IGKV1D-37A0A075B6S9 117 aa3.1□□□□□ -1.91
UPF3A-205ENST00000479712 C7orf66A4D0T2 115 aa3.1□□□□□ -1.91
UPF3A-205ENST00000479712 SNRPGP15A8MWD9 76 aa3.1□□□□□ -1.91
UPF3A-205ENST00000479712 IL4P05112 153 aa3.1□□□□□ -1.91
UPF3A-205ENST00000479712 LINC00315P59091 139 aa3.1□□□□□ -1.91
UPF3A-205ENST00000479712 ZNF846Q147U1 533 aa3.1□□□□□ -1.91
UPF3A-205ENST00000479712 VAMP3Q15836 100 aa3.1□□□□□ -1.91
UPF3A-205ENST00000479712 USF2Q15853 346 aaPredicted RBP3.1□□□□□ -1.91
UPF3A-205ENST00000479712 TAL2Q16559 108 aa3.1□□□□□ -1.91
UPF3A-205ENST00000479712 IAH1Q2TAA2 248 aaPredicted RBP3.1□□□□□ -1.91
UPF3A-205ENST00000479712 DEFB135Q30KP9 77 aa3.1□□□□□ -1.91
UPF3A-205ENST00000479712 KRTAP20-1Q3LI63 56 aa3.1□□□□□ -1.91
UPF3A-205ENST00000479712 SPATA31B1PQ5VZV4 182 aa3.1□□□□□ -1.91
UPF3A-205ENST00000479712 MORN3Q6PF18 240 aaPredicted RBP3.1□□□□□ -1.91
UPF3A-205ENST00000479712 TMEM14EPQ6UXP3 125 aa3.1□□□□□ -1.91
UPF3A-205ENST00000479712 TMEM144Q7Z5S9 345 aa3.1□□□□□ -1.91
UPF3A-205ENST00000479712 C15orf53Q8NAA6 179 aa3.1□□□□□ -1.91
UPF3A-205ENST00000479712 ZNF431Q8TF32 576 aaPredicted RBP3.1□□□□□ -1.91
UPF3A-205ENST00000479712 DCANP1Q8TF63 244 aa3.1□□□□□ -1.91
UPF3A-205ENST00000479712 ACY3Q96HD9 319 aa3.1□□□□□ -1.91
UPF3A-205ENST00000479712 GPR82Q96P67 336 aa3.1□□□□□ -1.91
UPF3A-205ENST00000479712 RABAC1Q9UI14 185 aa3.1□□□□□ -1.91
UPF3A-205ENST00000479712 VAX2Q9UIW0 290 aa3.1□□□□□ -1.91
UPF3A-205ENST00000479712 IGKV1OR2-108A0A075B7D4 117 aa3.09□□□□□ -1.91
UPF3A-205ENST00000479712 IGHV3OR16-8A0A075B7F1 116 aa3.09□□□□□ -1.91
UPF3A-205ENST00000479712 IGHV3-49A0A0A0MS15 119 aa3.09□□□□□ -1.91
UPF3A-205ENST00000479712 ADAP1O75689 374 aa3.09□□□□□ -1.91
UPF3A-205ENST00000479712 IAPPP10997 89 aa3.09□□□□□ -1.91
UPF3A-205ENST00000479712 GALR1P47211 349 aa3.09□□□□□ -1.91
UPF3A-205ENST00000479712 SNRPD3P62318 126 aaKnown RBP3.09□□□□□ -1.91
UPF3A-205ENST00000479712 POLR2GP62487 172 aaKnown RBP eCLIP3.09□□□□□ -1.91
UPF3A-205ENST00000479712 IL15RAQ13261 267 aa3.09□□□□□ -1.91
UPF3A-205ENST00000479712 COX19Q49B96 90 aa3.09□□□□□ -1.91
UPF3A-205ENST00000479712 SPANXN5Q5MJ07 72 aa3.09□□□□□ -1.91
UPF3A-205ENST00000479712 C12orf45Q8N5I9 185 aaPredicted RBP3.09□□□□□ -1.91
UPF3A-205ENST00000479712 OR10P1Q8NGE3 313 aa3.09□□□□□ -1.91
UPF3A-205ENST00000479712 C2orf50Q96LR7 162 aa3.09□□□□□ -1.91
UPF3A-205ENST00000479712 C11orf68Q9H3H3 251 aaKnown RBP3.09□□□□□ -1.91
UPF3A-205ENST00000479712 NPVFQ9HCQ7 196 aa3.09□□□□□ -1.91
UPF3A-205ENST00000479712 PSENENQ9NZ42 101 aa3.09□□□□□ -1.91
UPF3A-205ENST00000479712 PRO0461Q9UI25 63 aa3.09□□□□□ -1.91
UPF3A-205ENST00000479712 TRAV8-6A0A0B4J262 113 aa3.08□□□□□ -1.92
UPF3A-205ENST00000479712 LINC00854A0A1B0GVQ3 168 aa3.08□□□□□ -1.92
UPF3A-205ENST00000479712 A8MTW9 85 aa3.08□□□□□ -1.92
UPF3A-205ENST00000479712 ISLRO14498 428 aa3.08□□□□□ -1.92
UPF3A-205ENST00000479712 DEFB4AO15263 64 aa3.08□□□□□ -1.92
UPF3A-205ENST00000479712 GATCO43716 136 aaKnown RBP3.08□□□□□ -1.92
UPF3A-205ENST00000479712 SSSCA1O60232 199 aa3.08□□□□□ -1.92
UPF3A-205ENST00000479712 OR5AL1P0C617 328 aa3.08□□□□□ -1.92
UPF3A-205ENST00000479712 PVALBP20472 110 aaPredicted RBP3.08□□□□□ -1.92
UPF3A-205ENST00000479712 PSMB3P49720 205 aa3.08□□□□□ -1.92
UPF3A-205ENST00000479712 DEFA1P59665 94 aa3.08□□□□□ -1.92
UPF3A-205ENST00000479712 DEFA3P59666 94 aa3.08□□□□□ -1.92
UPF3A-205ENST00000479712 DEFB131AP59861 70 aa3.08□□□□□ -1.92
UPF3A-205ENST00000479712 ZNF90Q03938 601 aa3.08□□□□□ -1.92
UPF3A-205ENST00000479712 AKR1C1Q04828 323 aa3.08□□□□□ -1.92
UPF3A-205ENST00000479712 MARVELD1Q9BSK0 173 aa3.08□□□□□ -1.92
UPF3A-205ENST00000479712 CHCHD7Q9BUK0 85 aa3.08□□□□□ -1.92
UPF3A-205ENST00000479712 SCRT1Q9BWW7 348 aa3.08□□□□□ -1.92
UPF3A-205ENST00000479712 C11orf1Q9H5F2 150 aa3.08□□□□□ -1.92
UPF3A-205ENST00000479712 CYTL1Q9NRR1 136 aa3.08□□□□□ -1.92
UPF3A-205ENST00000479712 FAM240AA0A1B0GVK7 77 aa3.07□□□□□ -1.92
UPF3A-205ENST00000479712 RAB19A4D1S5 217 aa3.07□□□□□ -1.92
UPF3A-205ENST00000479712 ZNF98A6NK75 572 aa3.07□□□□□ -1.92
UPF3A-205ENST00000479712 H3BMM0 161 aa3.07□□□□□ -1.92
UPF3A-205ENST00000479712 H3BP45 60 aa3.07□□□□□ -1.92
UPF3A-205ENST00000479712 H3BRN7 92 aa3.07□□□□□ -1.92
UPF3A-205ENST00000479712 K7EN84 100 aa3.07□□□□□ -1.92
UPF3A-205ENST00000479712 HYPMO75409 117 aa3.07□□□□□ -1.92
UPF3A-205ENST00000479712 IGLV2-8P01709 118 aa3.07□□□□□ -1.92
UPF3A-205ENST00000479712 HLA-DRB4P13762 266 aa3.07□□□□□ -1.92
UPF3A-205ENST00000479712 MIFP14174 115 aa3.07□□□□□ -1.92
UPF3A-205ENST00000479712 RPL7P18124 248 aaKnown RBP3.07□□□□□ -1.92
UPF3A-205ENST00000479712 CXCL2P19875 107 aa3.07□□□□□ -1.92
UPF3A-205ENST00000479712 S100A11P31949 105 aa3.07□□□□□ -1.92
UPF3A-205ENST00000479712 SULT1A1P50225 295 aa3.07□□□□□ -1.92
UPF3A-205ENST00000479712 HBG1P69891 147 aa3.07□□□□□ -1.92
UPF3A-205ENST00000479712 HBG2P69892 147 aa3.07□□□□□ -1.92
UPF3A-205ENST00000479712 RAB31Q13636 194 aa3.07□□□□□ -1.92
UPF3A-205ENST00000479712 FOXI2Q6ZQN5 318 aa3.07□□□□□ -1.92
UPF3A-205ENST00000479712 CYP2G1PQ6ZSU1 146 aa3.07□□□□□ -1.92
UPF3A-205ENST00000479712 OR8I2Q8N0Y5 310 aa3.07□□□□□ -1.92
UPF3A-205ENST00000479712 FAM24BQ8N5W8 94 aa3.07□□□□□ -1.92
UPF3A-205ENST00000479712 C20orf144Q9BQM9 153 aa3.07□□□□□ -1.92
UPF3A-205ENST00000479712 SEC22CQ9BRL7 303 aa3.07□□□□□ -1.92
UPF3A-205ENST00000479712 SHANK2-AS3Q9BTD1 123 aa3.07□□□□□ -1.92
UPF3A-205ENST00000479712 PBDC1Q9BVG4 233 aa3.07□□□□□ -1.92
UPF3A-205ENST00000479712 TMEM147Q9BVK8 224 aa3.07□□□□□ -1.92
UPF3A-205ENST00000479712 NMES1Q9C002 83 aa3.07□□□□□ -1.92
UPF3A-205ENST00000479712 LYRM2Q9NU23 88 aaPredicted RBP3.07□□□□□ -1.92
UPF3A-205ENST00000479712 GSKIPQ9P0R6 139 aa3.07□□□□□ -1.92
UPF3A-205ENST00000479712 PAIP2BQ9ULR5 123 aaKnown RBP3.07□□□□□ -1.92
UPF3A-205ENST00000479712 HIGD1AQ9Y241 93 aa3.07□□□□□ -1.92
UPF3A-205ENST00000479712 HLA-DRB4X5D2U9 266 aa3.07□□□□□ -1.92
UPF3A-205ENST00000479712 IGKV3-7A0A075B6H7 116 aa3.06□□□□□ -1.92
UPF3A-205ENST00000479712 SMIM9A6NGZ8 99 aa3.06□□□□□ -1.92
UPF3A-205ENST00000479712 INMT-MINDY4F8WBC2 141 aa3.06□□□□□ -1.92
UPF3A-205ENST00000479712 RLN2P04090 185 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms