RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 HIVEP3Q5T1R4 2406 aa11.09□□□□□ -0.63
COL20A1-206ENST00000479501 PRAC2D3DTV9 90 aa11.09□□□□□ -0.63
COL20A1-206ENST00000479501 C15orf53Q8NAA6 179 aa11.09□□□□□ -0.63
COL20A1-206ENST00000479501 PRB1P04280 392 aa11.08□□□□□ -0.63
COL20A1-206ENST00000479501 FXYD2P54710 66 aa11.08□□□□□ -0.64
COL20A1-206ENST00000479501 C20orf78Q9BR46 151 aa11.08□□□□□ -0.64
COL20A1-206ENST00000479501 RANBP2P49792 3224 aaKnown RBP11.08□□□□□ -0.64
COL20A1-206ENST00000479501 USP9YO00507 2555 aaPredicted RBP11.08□□□□□ -0.64
COL20A1-206ENST00000479501 C19orf71A6NCJ1 209 aa11.08□□□□□ -0.64
COL20A1-206ENST00000479501 CRYGBP07316 175 aa11.08□□□□□ -0.64
COL20A1-206ENST00000479501 C16orf54Q6UWD8 224 aa11.08□□□□□ -0.64
COL20A1-206ENST00000479501 TTTY13Q9BZ97 58 aa11.08□□□□□ -0.64
COL20A1-206ENST00000479501 GNRH2O43555 120 aa11.08□□□□□ -0.64
COL20A1-206ENST00000479501 GATA1P15976 413 aaPredicted RBP11.08□□□□□ -0.64
COL20A1-206ENST00000479501 YPEL4Q96NS1 127 aa11.08□□□□□ -0.64
COL20A1-206ENST00000479501 SORL1Q92673 2214 aa11.07□□□□□ -0.64
COL20A1-206ENST00000479501 CARD19Q96LW7 228 aa11.07□□□□□ -0.64
COL20A1-206ENST00000479501 USP9XQ93008 2570 aaPredicted RBP11.07□□□□□ -0.64
COL20A1-206ENST00000479501 TLN2Q9Y4G6 2542 aa11.07□□□□□ -0.64
COL20A1-206ENST00000479501 CFC1BP0CG36 223 aa11.07□□□□□ -0.64
COL20A1-206ENST00000479501 CFC1P0CG37 223 aa11.07□□□□□ -0.64
COL20A1-206ENST00000479501 SS18L2Q9UHA2 77 aa11.07□□□□□ -0.64
COL20A1-206ENST00000479501 I3L3M4 83 aa11.07□□□□□ -0.64
COL20A1-206ENST00000479501 RHODO00212 210 aa11.07□□□□□ -0.64
COL20A1-206ENST00000479501 HOXD3P31249 432 aaPredicted RBP11.07□□□□□ -0.64
COL20A1-206ENST00000479501 ABCA2Q9BZC7 2435 aa11.06□□□□□ -0.64
COL20A1-206ENST00000479501 SPRY2O43597 315 aa11.06□□□□□ -0.64
COL20A1-206ENST00000479501 TRBV6-1A0A0K0K1D8 114 aa11.06□□□□□ -0.64
COL20A1-206ENST00000479501 SOCS3O14543 225 aa11.06□□□□□ -0.64
COL20A1-206ENST00000479501 COL4A2P08572 1712 aa11.05□□□□□ -0.64
COL20A1-206ENST00000479501 IGHG2P01859 326 aa11.05□□□□□ -0.64
COL20A1-206ENST00000479501 LINC00322Q6ZN03 302 aaPredicted RBP11.05□□□□□ -0.64
COL20A1-206ENST00000479501 NACAE9PAV3 2078 aa11.05□□□□□ -0.64
COL20A1-206ENST00000479501 LY6LH3BQJ8 138 aa11.05□□□□□ -0.64
COL20A1-206ENST00000479501 C19orf84I3L1E1 186 aa11.05□□□□□ -0.64
COL20A1-206ENST00000479501 K7EMI3 77 aa11.05□□□□□ -0.64
COL20A1-206ENST00000479501 DPH3Q96FX2 82 aa11.05□□□□□ -0.64
COL20A1-206ENST00000479501 MLST8Q9BVC4 326 aa11.05□□□□□ -0.64
COL20A1-206ENST00000479501 DSCAML1Q8TD84 2053 aa11.04□□□□□ -0.64
COL20A1-206ENST00000479501 BOD1L2Q8IYS8 172 aa11.04□□□□□ -0.64
COL20A1-206ENST00000479501 C2orf70A6NJV1 201 aa11.04□□□□□ -0.64
COL20A1-206ENST00000479501 SPANXDQ9BXN6 97 aa11.04□□□□□ -0.64
COL20A1-206ENST00000479501 LINC01548A6NM66 108 aa11.03□□□□□ -0.64
COL20A1-206ENST00000479501 DEFB113Q30KQ7 82 aa11.03□□□□□ -0.64
COL20A1-206ENST00000479501 ANKRD29Q8N6D5 301 aa11.03□□□□□ -0.64
COL20A1-206ENST00000479501 PRORYQ9H606 182 aa11.03□□□□□ -0.64
COL20A1-206ENST00000479501 G3V4G9 280 aa11.03□□□□□ -0.64
COL20A1-206ENST00000479501 ZNF493Q6ZR52 646 aa11.03□□□□□ -0.64
COL20A1-206ENST00000479501 CHD9Q3L8U1 2897 aa11.03□□□□□ -0.64
COL20A1-206ENST00000479501 C11orf71Q6IPW1 123 aa11.03□□□□□ -0.64
COL20A1-206ENST00000479501 SMIM20Q8N5G0 67 aa11.03□□□□□ -0.64
COL20A1-206ENST00000479501 DEFB136Q30KP8 78 aa11.02□□□□□ -0.64
COL20A1-206ENST00000479501 IGHV3-16A0A0C4DH30 117 aa11.02□□□□□ -0.65
COL20A1-206ENST00000479501 VWC2LB2RUY7 222 aa11.02□□□□□ -0.65
COL20A1-206ENST00000479501 C9orf47Q6ZRZ4 202 aa11.02□□□□□ -0.65
COL20A1-206ENST00000479501 TEN1Q86WV5 123 aa11.02□□□□□ -0.65
COL20A1-206ENST00000479501 HIGD1BQ9P298 99 aa11.02□□□□□ -0.65
COL20A1-206ENST00000479501 A0A1B0GXF2 115 aa11.01□□□□□ -0.65
COL20A1-206ENST00000479501 EBI3Q14213 229 aa11.01□□□□□ -0.65
COL20A1-206ENST00000479501 MKI67P46013 3256 aaKnown RBP11.01□□□□□ -0.65
COL20A1-206ENST00000479501 J3QKU1 62 aa11.01□□□□□ -0.65
COL20A1-206ENST00000479501 CRYBA4P53673 196 aa11.01□□□□□ -0.65
COL20A1-206ENST00000479501 MBD6Q96DN6 1003 aa11.01□□□□□ -0.65
COL20A1-206ENST00000479501 CTRLP40313 264 aa11.01□□□□□ -0.65
COL20A1-206ENST00000479501 UNQ9165/PRO28630Q6UXU0 137 aa11.01□□□□□ -0.65
COL20A1-206ENST00000479501 CCDC140Q96MF4 163 aa11.01□□□□□ -0.65
COL20A1-206ENST00000479501 RNF114Q9Y508 228 aa11.01□□□□□ -0.65
COL20A1-206ENST00000479501 PFN2P35080 140 aa11□□□□□ -0.65
COL20A1-206ENST00000479501 K7EMT4 169 aa10.99□□□□□ -0.65
COL20A1-206ENST00000479501 TRBV12-3P01733 135 aa10.99□□□□□ -0.65
COL20A1-206ENST00000479501 A6NDX4 124 aa10.99□□□□□ -0.65
COL20A1-206ENST00000479501 DEFB1P60022 68 aa10.99□□□□□ -0.65
COL20A1-206ENST00000479501 TRACP01848 142 aa10.99□□□□□ -0.65
COL20A1-206ENST00000479501 SRSF2Q01130 221 aaKnown RBP10.99□□□□□ -0.65
COL20A1-206ENST00000479501 GDF5OSQ5U4N7 250 aa10.99□□□□□ -0.65
COL20A1-206ENST00000479501 SPATA12Q7Z6I5 190 aa10.99□□□□□ -0.65
COL20A1-206ENST00000479501 UBL5Q9BZL1 73 aa10.99□□□□□ -0.65
COL20A1-206ENST00000479501 IGHG4P01861 327 aa10.99□□□□□ -0.65
COL20A1-206ENST00000479501 DEFB130BP0DP73 79 aa10.99□□□□□ -0.65
COL20A1-206ENST00000479501 DEFB130AP0DP74 79 aa10.99□□□□□ -0.65
COL20A1-206ENST00000479501 TNFRSF13BO14836 293 aaPredicted RBP10.98□□□□□ -0.65
COL20A1-206ENST00000479501 TRAV26-1A0A087WT03 109 aa10.98□□□□□ -0.65
COL20A1-206ENST00000479501 IGHV3-38A0A0C4DH36 116 aa10.98□□□□□ -0.65
COL20A1-206ENST00000479501 FOXI1Q12951 378 aa10.98□□□□□ -0.65
COL20A1-206ENST00000479501 GPHB5Q86YW7 130 aa10.98□□□□□ -0.65
COL20A1-206ENST00000479501 SLURP1P55000 103 aa10.98□□□□□ -0.65
COL20A1-206ENST00000479501 CDSNQ15517 529 aa10.97□□□□□ -0.65
COL20A1-206ENST00000479501 RS1O15537 224 aa10.97□□□□□ -0.65
COL20A1-206ENST00000479501 MYCNOSP40205 109 aa10.97□□□□□ -0.65
COL20A1-206ENST00000479501 ZNF80P51504 273 aaPredicted RBP10.97□□□□□ -0.65
COL20A1-206ENST00000479501 RNASE13Q5GAN3 156 aaKnown RBP10.97□□□□□ -0.65
COL20A1-206ENST00000479501 RPL39LQ96EH5 51 aaKnown RBP10.97□□□□□ -0.65
COL20A1-206ENST00000479501 A4D1N5 150 aa10.97□□□□□ -0.65
COL20A1-206ENST00000479501 HAMPP81172 84 aa10.97□□□□□ -0.65
COL20A1-206ENST00000479501 ZNRF2Q8NHG8 242 aa10.96□□□□□ -0.65
COL20A1-206ENST00000479501 SETD2Q9BYW2 2564 aaPredicted RBP10.96□□□□□ -0.65
COL20A1-206ENST00000479501 IGHV4OR15-8A0A075B7B6 117 aa10.96□□□□□ -0.66
COL20A1-206ENST00000479501 A0A087WW49 117 aa10.96□□□□□ -0.66
COL20A1-206ENST00000479501 CFHR3Q02985 330 aa10.95□□□□□ -0.66
COL20A1-206ENST00000479501 SS18Q15532 418 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms