RNA–Protein interactions for RNA: ENST00000478958.5

LRRFIP1-211, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best)

Gene LRRFIP1, Length 2,869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-211ENST00000478958 GAGE2AQ6NT46 116 aa8.44□□□□□ -1.06
LRRFIP1-211ENST00000478958 HRCT1Q6UXD1 115 aa8.44□□□□□ -1.06
LRRFIP1-211ENST00000478958 LINC00526Q96FQ7 95 aa8.44□□□□□ -1.06
LRRFIP1-211ENST00000478958 LINC00527Q9UJ94 153 aa8.44□□□□□ -1.06
LRRFIP1-211ENST00000478958 MSRB2Q9Y3D2 182 aa8.44□□□□□ -1.06
LRRFIP1-211ENST00000478958 CDSNQ15517 529 aa8.43□□□□□ -1.06
LRRFIP1-211ENST00000478958 LY6G5BQ8NDX9 201 aa8.43□□□□□ -1.06
LRRFIP1-211ENST00000478958 MYOZ3Q8TDC0 251 aa8.43□□□□□ -1.06
LRRFIP1-211ENST00000478958 DUX3Q96PT4 197 aa8.43□□□□□ -1.06
LRRFIP1-211ENST00000478958 PLNP26678 52 aa8.43□□□□□ -1.06
LRRFIP1-211ENST00000478958 C4orf26Q17RF5 130 aa8.43□□□□□ -1.06
LRRFIP1-211ENST00000478958 SPANXCQ9NY87 97 aa8.43□□□□□ -1.06
LRRFIP1-211ENST00000478958 TRBV7-7A0A0K0K1E9 115 aa8.43□□□□□ -1.06
LRRFIP1-211ENST00000478958 H3BMM0 161 aa8.43□□□□□ -1.06
LRRFIP1-211ENST00000478958 BUB3O43684 328 aa8.43□□□□□ -1.06
LRRFIP1-211ENST00000478958 DEFB1P60022 68 aa8.43□□□□□ -1.06
LRRFIP1-211ENST00000478958 SRSF2Q01130 221 aaKnown RBP8.43□□□□□ -1.06
LRRFIP1-211ENST00000478958 ZNRF2Q8NHG8 242 aa8.43□□□□□ -1.06
LRRFIP1-211ENST00000478958 UBE2WQ96B02 151 aa8.43□□□□□ -1.06
LRRFIP1-211ENST00000478958 CREBBPQ92793 2442 aa8.42□□□□□ -1.06
LRRFIP1-211ENST00000478958 LGALS9O00182 355 aa8.42□□□□□ -1.06
LRRFIP1-211ENST00000478958 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.42□□□□□ -1.06
LRRFIP1-211ENST00000478958 IGKV3-7A0A075B6H7 116 aa8.42□□□□□ -1.06
LRRFIP1-211ENST00000478958 ZNF815PA8K554 130 aa8.42□□□□□ -1.06
LRRFIP1-211ENST00000478958 M0R381 172 aa8.42□□□□□ -1.06
LRRFIP1-211ENST00000478958 CCL21O00585 134 aa8.42□□□□□ -1.06
LRRFIP1-211ENST00000478958 IGF1P05019 195 aa8.42□□□□□ -1.06
LRRFIP1-211ENST00000478958 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.41□□□□□ -1.061e-10■■■□□ 16.4
LRRFIP1-211ENST00000478958 ODF3BA8MYP8 253 aa8.41□□□□□ -1.06
LRRFIP1-211ENST00000478958 ATP6V0E1O15342 81 aa8.41□□□□□ -1.06
LRRFIP1-211ENST00000478958 ZFP36P26651 326 aaKnown RBP8.41□□□□□ -1.06
LRRFIP1-211ENST00000478958 RPL13AP40429 203 aaKnown RBP8.41□□□□□ -1.06
LRRFIP1-211ENST00000478958 COX8CQ7Z4L0 72 aa8.41□□□□□ -1.06
LRRFIP1-211ENST00000478958 Q8N8P6 123 aa8.41□□□□□ -1.06
LRRFIP1-211ENST00000478958 LAGE3Q14657 143 aa8.41□□□□□ -1.06
LRRFIP1-211ENST00000478958 CEMP1Q6PRD7 247 aaPredicted RBP8.41□□□□□ -1.06
LRRFIP1-211ENST00000478958 NCOR2Q9Y618 2525 aa8.41□□□□□ -1.06
LRRFIP1-211ENST00000478958 CNFNQ9BYD5 112 aa8.4□□□□□ -1.06
LRRFIP1-211ENST00000478958 Q8N9W7 124 aa8.4□□□□□ -1.06
LRRFIP1-211ENST00000478958 VKORC1Q9BQB6 163 aa8.4□□□□□ -1.06
LRRFIP1-211ENST00000478958 PRO1854Q9UHT4 67 aa8.4□□□□□ -1.06
LRRFIP1-211ENST00000478958 IGLV2-18A0A075B6J9 118 aa8.4□□□□□ -1.07
LRRFIP1-211ENST00000478958 TMEM190Q8WZ59 177 aa8.4□□□□□ -1.07
LRRFIP1-211ENST00000478958 PLEKHB2Q96CS7 222 aa8.4□□□□□ -1.07
LRRFIP1-211ENST00000478958 ZFAND3Q9H8U3 227 aa8.4□□□□□ -1.07
LRRFIP1-211ENST00000478958 ZNF256Q9Y2P7 627 aaPredicted RBP8.4□□□□□ -1.07
LRRFIP1-211ENST00000478958 IGHV3OR16-10A0A075B7F0 116 aa8.39□□□□□ -1.07
LRRFIP1-211ENST00000478958 IGHV7-4-1A0A0J9YVY3 117 aa8.39□□□□□ -1.07
LRRFIP1-211ENST00000478958 CFC1BP0CG36 223 aa8.39□□□□□ -1.07
LRRFIP1-211ENST00000478958 CFC1P0CG37 223 aa8.39□□□□□ -1.07
LRRFIP1-211ENST00000478958 POM121L12Q8N7R1 296 aa8.39□□□□□ -1.07
LRRFIP1-211ENST00000478958 NRACQ8N912 160 aa8.39□□□□□ -1.07
LRRFIP1-211ENST00000478958 CHD8Q9HCK8 2581 aa8.39□□□□□ -1.07
LRRFIP1-211ENST00000478958 CLPSL1A2RUU4 121 aa8.39□□□□□ -1.07
LRRFIP1-211ENST00000478958 J3QLI3 93 aa8.39□□□□□ -1.07
LRRFIP1-211ENST00000478958 M0R1W7 72 aa8.39□□□□□ -1.07
LRRFIP1-211ENST00000478958 C16orf92Q96LL3 132 aa8.39□□□□□ -1.07
LRRFIP1-211ENST00000478958 CCDC140Q96MF4 163 aa8.39□□□□□ -1.07
LRRFIP1-211ENST00000478958 LINC01546A6NGU7 62 aa8.38□□□□□ -1.07
LRRFIP1-211ENST00000478958 H7C1H1 209 aa8.38□□□□□ -1.07
LRRFIP1-211ENST00000478958 LINC01620Q4KN68 170 aa8.38□□□□□ -1.07
LRRFIP1-211ENST00000478958 PRR9Q5T870 116 aa8.38□□□□□ -1.07
LRRFIP1-211ENST00000478958 F8VRH5 84 aa8.38□□□□□ -1.07
LRRFIP1-211ENST00000478958 IGHV4-39P01824 125 aa8.38□□□□□ -1.07
LRRFIP1-211ENST00000478958 MGPP08493 103 aa8.38□□□□□ -1.07
LRRFIP1-211ENST00000478958 S100A4P26447 101 aaKnown RBP8.38□□□□□ -1.07
LRRFIP1-211ENST00000478958 RPL11P62913 178 aaKnown RBP8.38□□□□□ -1.07
LRRFIP1-211ENST00000478958 EBI3Q14213 229 aa8.38□□□□□ -1.07
LRRFIP1-211ENST00000478958 ATXN8Q156A1 80 aa8.38□□□□□ -1.07
LRRFIP1-211ENST00000478958 Q8N6K4 173 aa8.38□□□□□ -1.07
LRRFIP1-211ENST00000478958 C14orf178Q8N769 122 aaPredicted RBP8.38□□□□□ -1.07
LRRFIP1-211ENST00000478958 RPL39LQ96EH5 51 aaKnown RBP8.38□□□□□ -1.07
LRRFIP1-211ENST00000478958 PSMG3-AS1Q96PY0 264 aa8.38□□□□□ -1.07
LRRFIP1-211ENST00000478958 CUBNO60494 3623 aa8.37□□□□□ -1.07
LRRFIP1-211ENST00000478958 H7C2G1 150 aa8.37□□□□□ -1.07
LRRFIP1-211ENST00000478958 LINC00477Q96M19 166 aa8.37□□□□□ -1.07
LRRFIP1-211ENST00000478958 METTL26Q96S19 204 aa8.37□□□□□ -1.07
LRRFIP1-211ENST00000478958 COX7CP15954 63 aa8.37□□□□□ -1.07
LRRFIP1-211ENST00000478958 HERVK_113P61574 105 aa8.37□□□□□ -1.07
LRRFIP1-211ENST00000478958 SCGB3A1Q96QR1 104 aa8.37□□□□□ -1.07
LRRFIP1-211ENST00000478958 SLC50A1Q9BRV3 221 aa8.37□□□□□ -1.07
LRRFIP1-211ENST00000478958 SPANXDQ9BXN6 97 aa8.37□□□□□ -1.07
LRRFIP1-211ENST00000478958 IMUPQ9GZP8 106 aa8.37□□□□□ -1.07
LRRFIP1-211ENST00000478958 TRACP01848 142 aa8.36□□□□□ -1.07
LRRFIP1-211ENST00000478958 SLC25A16P16260 332 aa8.36□□□□□ -1.07
LRRFIP1-211ENST00000478958 DPH3Q96FX2 82 aa8.36□□□□□ -1.07
LRRFIP1-211ENST00000478958 C1orf43Q9BWL3 253 aa8.36□□□□□ -1.07
LRRFIP1-211ENST00000478958 TRBV10-2A0A0K0K1G8 114 aa8.36□□□□□ -1.07
LRRFIP1-211ENST00000478958 OVOL1O14753 267 aa8.36□□□□□ -1.07
LRRFIP1-211ENST00000478958 SAA4P35542 130 aa8.36□□□□□ -1.07
LRRFIP1-211ENST00000478958 C2orf82Q6UX34 121 aa8.36□□□□□ -1.07
LRRFIP1-211ENST00000478958 HIVEP3Q5T1R4 2406 aa8.36□□□□□ -1.07
LRRFIP1-211ENST00000478958 TCF15Q12870 199 aa8.36□□□□□ -1.07
LRRFIP1-211ENST00000478958 FAM110DQ8TAY7 271 aaPredicted RBP8.36□□□□□ -1.07
LRRFIP1-211ENST00000478958 SORL1Q92673 2214 aa8.35□□□□□ -1.07
LRRFIP1-211ENST00000478958 FAM240AA0A1B0GVK7 77 aa8.35□□□□□ -1.07
LRRFIP1-211ENST00000478958 hADV29S1A0JD25 119 aa8.35□□□□□ -1.07
LRRFIP1-211ENST00000478958 F6UB75 175 aa8.35□□□□□ -1.07
LRRFIP1-211ENST00000478958 CRYGAP11844 174 aa8.35□□□□□ -1.07
LRRFIP1-211ENST00000478958 SMIM2Q9BVW6 85 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms