RNA–Protein interactions for RNA: ENST00000478490.5

MITF-215, Transcript of melanogenesis associated transcription factor, human

TSL 5

Gene MITF, Length 1,642 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MITF-215	ENST00000478490	RETN	Q9HD89	108 aa		4.65	□□□□□ -1.66
MITF-215	ENST00000478490	UQCR10	Q9UDW1	63 aa		4.65	□□□□□ -1.66
MITF-215	ENST00000478490	IGHV3OR16-8	A0A075B7F1	116 aa		4.64	□□□□□ -1.67
MITF-215	ENST00000478490	TRAV9-2	A0A087WT02	112 aa		4.64	□□□□□ -1.67
MITF-215	ENST00000478490	TMSB15B	A0A087X1C1	80 aa		4.64	□□□□□ -1.67
MITF-215	ENST00000478490	TRAV21	A0A0B4J279	112 aa		4.64	□□□□□ -1.67
MITF-215	ENST00000478490	IGHV1-24	A0A0C4DH33	117 aa		4.64	□□□□□ -1.67
MITF-215	ENST00000478490	IGHV3-66	A0A0C4DH42	116 aa		4.64	□□□□□ -1.67
MITF-215	ENST00000478490	C2orf70	A6NJV1	201 aa		4.64	□□□□□ -1.67
MITF-215	ENST00000478490	HLA-DMB	P28068	263 aa		4.64	□□□□□ -1.67
MITF-215	ENST00000478490	TIRAP	P58753	221 aa		4.64	□□□□□ -1.67
MITF-215	ENST00000478490	TWIST1	Q15672	202 aa		4.64	□□□□□ -1.67
MITF-215	ENST00000478490	KRTAP19-4	Q3LI73	84 aa		4.64	□□□□□ -1.67
MITF-215	ENST00000478490	SPATA45	Q537H7	98 aa		4.64	□□□□□ -1.67
MITF-215	ENST00000478490	ZNF738	Q8NE65	137 aa		4.64	□□□□□ -1.67
MITF-215	ENST00000478490	PRELID3A	Q96N28	172 aa		4.64	□□□□□ -1.67
MITF-215	ENST00000478490	WFDC10A	Q9H1F0	79 aa		4.64	□□□□□ -1.67
MITF-215	ENST00000478490	PAM16	Q9Y3D7	125 aa		4.64	□□□□□ -1.67
MITF-215	ENST00000478490	IGHV4-4	A0A075B6R2	117 aa		4.64	□□□□□ -1.67
MITF-215	ENST00000478490	PRAC2	D3DTV9	90 aa		4.64	□□□□□ -1.67
MITF-215	ENST00000478490	SYS1-DBNDD2	H3BUS1	97 aa		4.64	□□□□□ -1.67
MITF-215	ENST00000478490	SOCS3	O14543	225 aa		4.64	□□□□□ -1.67
MITF-215	ENST00000478490	SNAI2	O43623	268 aa		4.64	□□□□□ -1.67
MITF-215	ENST00000478490	ZNF207	O43670	478 aa	Known RBP	4.64	□□□□□ -1.67
MITF-215	ENST00000478490	CKS2	P33552	79 aa		4.64	□□□□□ -1.67
MITF-215	ENST00000478490	ZNF80	P51504	273 aa	Predicted RBP	4.64	□□□□□ -1.67
MITF-215	ENST00000478490	ERCC8	Q13216	396 aa		4.64	□□□□□ -1.67
MITF-215	ENST00000478490	CD300E	Q496F6	205 aa	Predicted RBP	4.64	□□□□□ -1.67
MITF-215	ENST00000478490	PSMG4	Q5JS54	123 aa		4.64	□□□□□ -1.67
MITF-215	ENST00000478490	IGFL4	Q6B9Z1	124 aa		4.64	□□□□□ -1.67
MITF-215	ENST00000478490	EBLN2	Q6P2I7	272 aa		4.64	□□□□□ -1.67
MITF-215	ENST00000478490	ZNF705A	Q6ZN79	300 aa	Predicted RBP	4.64	□□□□□ -1.67
MITF-215	ENST00000478490	SPATA12	Q7Z6I5	190 aa		4.64	□□□□□ -1.67
MITF-215	ENST00000478490	DEFB125	Q8N687	156 aa		4.64	□□□□□ -1.67
MITF-215	ENST00000478490	RNF182	Q8N6D2	247 aa		4.64	□□□□□ -1.67
MITF-215	ENST00000478490	RNASE8	Q8TDE3	154 aa	Known RBP	4.64	□□□□□ -1.67
MITF-215	ENST00000478490	DYNLRB2	Q8TF09	96 aa		4.64	□□□□□ -1.67
MITF-215	ENST00000478490	URB1-AS1	Q96HZ7	61 aa		4.64	□□□□□ -1.67
MITF-215	ENST00000478490	FAM110A	Q9BQ89	295 aa		4.64	□□□□□ -1.67
MITF-215	ENST00000478490	RHPN1-AS1	Q9BWJ2	59 aa		4.64	□□□□□ -1.67
MITF-215	ENST00000478490	SMPX	Q9UHP9	88 aa		4.64	□□□□□ -1.67
MITF-215	ENST00000478490	IGHV3OR16-13	A0A075B7E8	117 aa		4.63	□□□□□ -1.67
MITF-215	ENST00000478490		A0A087WWL8	130 aa		4.63	□□□□□ -1.67
MITF-215	ENST00000478490	IGHV3-49	A0A0A0MS15	119 aa		4.63	□□□□□ -1.67
MITF-215	ENST00000478490	IGHV3-74	A0A0B4J1X5	117 aa		4.63	□□□□□ -1.67
MITF-215	ENST00000478490	TMEM213	A2RRL7	107 aa		4.63	□□□□□ -1.67
MITF-215	ENST00000478490		D6R8Y8	96 aa		4.63	□□□□□ -1.67
MITF-215	ENST00000478490	LGALS9	O00182	355 aa		4.63	□□□□□ -1.67
MITF-215	ENST00000478490	CD7	P09564	240 aa		4.63	□□□□□ -1.67
MITF-215	ENST00000478490	MRPL51	Q4U2R6	128 aa	Known RBP	4.63	□□□□□ -1.67
MITF-215	ENST00000478490	UNQ9165/PRO28630	Q6UXU0	137 aa		4.63	□□□□□ -1.67
MITF-215	ENST00000478490	GTSCR1	Q86UQ5	136 aa		4.63	□□□□□ -1.67
MITF-215	ENST00000478490	AMN1	Q8IY45	258 aa		4.63	□□□□□ -1.67
MITF-215	ENST00000478490	MUC7	Q8TAX7	377 aa		4.63	□□□□□ -1.67
MITF-215	ENST00000478490	ODF3	Q96PU9	254 aa		4.63	□□□□□ -1.67
MITF-215	ENST00000478490	TM2D3	Q9BRN9	247 aa		4.63	□□□□□ -1.67
MITF-215	ENST00000478490	MS4A6A	Q9H2W1	248 aa		4.63	□□□□□ -1.67
MITF-215	ENST00000478490	MAP1LC3A	Q9H492	121 aa		4.63	□□□□□ -1.67
MITF-215	ENST00000478490	ST20	Q9HBF5	79 aa		4.63	□□□□□ -1.67
MITF-215	ENST00000478490	NXT2	Q9NPJ8	142 aa	Known RBP	4.63	□□□□□ -1.67
MITF-215	ENST00000478490	PEMT	Q9UBM1	199 aa		4.63	□□□□□ -1.67
MITF-215	ENST00000478490	IGKV3D-20	A0A0C4DH25	116 aa		4.62	□□□□□ -1.67
MITF-215	ENST00000478490	LINC01546	A6NGU7	62 aa		4.62	□□□□□ -1.67
MITF-215	ENST00000478490	OR4C46	A6NHA9	309 aa		4.62	□□□□□ -1.67
MITF-215	ENST00000478490	C3orf84	H3BNL1	204 aa		4.62	□□□□□ -1.67
MITF-215	ENST00000478490	HBD	P02042	147 aa		4.62	□□□□□ -1.67
MITF-215	ENST00000478490	RPL11	P62913	178 aa	Known RBP	4.62	□□□□□ -1.67
MITF-215	ENST00000478490	DEFB114	Q30KQ6	69 aa		4.62	□□□□□ -1.67
MITF-215	ENST00000478490	CASC10	Q5T4H9	136 aa		4.62	□□□□□ -1.67
MITF-215	ENST00000478490	APRG1	Q8IVJ8	170 aa		4.62	□□□□□ -1.67
MITF-215	ENST00000478490	OR8A1	Q8NGG7	326 aa		4.62	□□□□□ -1.67
MITF-215	ENST00000478490	AGRN	O00468	2067 aa		4.61	□□□□□ -1.67
MITF-215	ENST00000478490	RBMY1B	A6NDE4	496 aa	Known RBP	4.61	□□□□□ -1.67
MITF-215	ENST00000478490	RBMY1E	A6NEQ0	496 aa	Known RBP	4.61	□□□□□ -1.67
MITF-215	ENST00000478490	KRTAP9-7	A8MTY7	169 aa		4.61	□□□□□ -1.67
MITF-215	ENST00000478490	PPP1R17	O96001	155 aa		4.61	□□□□□ -1.67
MITF-215	ENST00000478490	RBMY1D	P0C7P1	496 aa	Known RBP	4.61	□□□□□ -1.67
MITF-215	ENST00000478490	IGLC3	P0DOY3	106 aa		4.61	□□□□□ -1.67
MITF-215	ENST00000478490	ASIP	P42127	132 aa		4.61	□□□□□ -1.67
MITF-215	ENST00000478490	HNRNPA3	P51991	378 aa	Known RBP	4.61	□□□□□ -1.67
MITF-215	ENST00000478490	SNRPD3	P62318	126 aa	Known RBP	4.61	□□□□□ -1.67
MITF-215	ENST00000478490	SPANXN1	Q5VSR9	72 aa		4.61	□□□□□ -1.67
MITF-215	ENST00000478490	MRAP2	Q96G30	205 aa		4.61	□□□□□ -1.67
MITF-215	ENST00000478490	FAM19A4	Q96LR4	140 aa		4.61	□□□□□ -1.67
MITF-215	ENST00000478490	SIGLEC8	Q9NYZ4	499 aa		4.61	□□□□□ -1.67
MITF-215	ENST00000478490	OR11H12	B2RN74	326 aa		4.61	□□□□□ -1.67
MITF-215	ENST00000478490		K7EMI3	77 aa		4.61	□□□□□ -1.67
MITF-215	ENST00000478490	S100A4	P26447	101 aa	Known RBP	4.61	□□□□□ -1.67
MITF-215	ENST00000478490	IFI27	P40305	119 aa	Predicted RBP	4.61	□□□□□ -1.67
MITF-215	ENST00000478490	LEP	P41159	167 aa		4.61	□□□□□ -1.67
MITF-215	ENST00000478490	LGALS9B	Q3B8N2	356 aa		4.61	□□□□□ -1.67
MITF-215	ENST00000478490	TDRG1	Q3Y452	100 aa		4.61	□□□□□ -1.67
MITF-215	ENST00000478490	LINC01545	Q5VT33	79 aa		4.61	□□□□□ -1.67
MITF-215	ENST00000478490	LGALS9C	Q6DKI2	356 aa		4.61	□□□□□ -1.67
MITF-215	ENST00000478490	ZFAND2A	Q8N6M9	145 aa		4.61	□□□□□ -1.67
MITF-215	ENST00000478490	RNF185	Q96GF1	192 aa		4.61	□□□□□ -1.67
MITF-215	ENST00000478490	C20orf173	Q96LM9	149 aa		4.61	□□□□□ -1.67
MITF-215	ENST00000478490	PMCHL2	Q9BQD1	86 aa		4.61	□□□□□ -1.67
MITF-215	ENST00000478490	SPATA25	Q9BR10	227 aa		4.61	□□□□□ -1.67
MITF-215	ENST00000478490	SNHG12	Q9BXW3	62 aa		4.61	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 11 ms