RNA–Protein interactions for RNA: ENST00000478250.1

NR4A1-205, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 1,820 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-205ENST00000478250 TMEM219Q86XT9 240 aa11.14□□□□□ -0.63
NR4A1-205ENST00000478250 MED13LQ71F56 2210 aa11.13□□□□□ -0.63
NR4A1-205ENST00000478250 TRBV7-1A0A0A6YYK4 115 aa11.13□□□□□ -0.63
NR4A1-205ENST00000478250 NOTCH2Q04721 2471 aa11.12□□□□□ -0.63
NR4A1-205ENST00000478250 TRAV26-2A0A0B4J265 109 aa11.12□□□□□ -0.63
NR4A1-205ENST00000478250 TRAV41A0A0B4J266 112 aa11.12□□□□□ -0.63
NR4A1-205ENST00000478250 IGHV7-4-1A0A0J9YVY3 117 aa11.12□□□□□ -0.63
NR4A1-205ENST00000478250 RHODO00212 210 aa11.12□□□□□ -0.63
NR4A1-205ENST00000478250 LGALS1P09382 135 aaKnown RBP11.12□□□□□ -0.63
NR4A1-205ENST00000478250 CLEC19AQ6UXS0 136 aa11.12□□□□□ -0.63
NR4A1-205ENST00000478250 SPANXDQ9BXN6 97 aa11.12□□□□□ -0.63
NR4A1-205ENST00000478250 C11orf21Q9P2W6 132 aa11.12□□□□□ -0.63
NR4A1-205ENST00000478250 B4DSR2 109 aa11.12□□□□□ -0.63
NR4A1-205ENST00000478250 MRPL23Q16540 153 aaKnown RBP11.12□□□□□ -0.63
NR4A1-205ENST00000478250 SMIM2Q9BVW6 85 aa11.12□□□□□ -0.63
NR4A1-205ENST00000478250 FAM223BA6NKX1 122 aa11.11□□□□□ -0.63
NR4A1-205ENST00000478250 PPP1R17O96001 155 aa11.11□□□□□ -0.63
NR4A1-205ENST00000478250 GATA3P23771 443 aa11.11□□□□□ -0.63
NR4A1-205ENST00000478250 C9orf47Q6ZRZ4 202 aa11.11□□□□□ -0.63
NR4A1-205ENST00000478250 FAM223AQ8IWN6 122 aa11.11□□□□□ -0.63
NR4A1-205ENST00000478250 TOMM6Q96B49 74 aa11.11□□□□□ -0.63
NR4A1-205ENST00000478250 C16orf92Q96LL3 132 aa11.11□□□□□ -0.63
NR4A1-205ENST00000478250 A6NDX4 124 aa11.1□□□□□ -0.63
NR4A1-205ENST00000478250 H3BVH4 76 aa11.1□□□□□ -0.63
NR4A1-205ENST00000478250 BRI3O95415 125 aa11.1□□□□□ -0.63
NR4A1-205ENST00000478250 IGF1P05019 195 aa11.1□□□□□ -0.63
NR4A1-205ENST00000478250 PSMB2P49721 201 aa11.1□□□□□ -0.63
NR4A1-205ENST00000478250 HERVK_113P61574 105 aa11.1□□□□□ -0.63
NR4A1-205ENST00000478250 SCGB3A1Q96QR1 104 aa11.1□□□□□ -0.63
NR4A1-205ENST00000478250 CCDC168Q8NDH2 2452 aa11.1□□□□□ -0.63
NR4A1-205ENST00000478250 IGHV3OR16-13A0A075B7E8 117 aa11.09□□□□□ -0.63
NR4A1-205ENST00000478250 IGHV3-74A0A0B4J1X5 117 aa11.09□□□□□ -0.63
NR4A1-205ENST00000478250 TRAV8-2A0A0B4J237 113 aa11.09□□□□□ -0.63
NR4A1-205ENST00000478250 CLPSL1A2RUU4 121 aa11.09□□□□□ -0.63
NR4A1-205ENST00000478250 CD7P09564 240 aa11.09□□□□□ -0.63
NR4A1-205ENST00000478250 NEXN-AS1Q8NBZ9 246 aa11.09□□□□□ -0.63
NR4A1-205ENST00000478250 CARD19Q96LW7 228 aa11.09□□□□□ -0.63
NR4A1-205ENST00000478250 IGHV3-49A0A0A0MS15 119 aa11.09□□□□□ -0.63
NR4A1-205ENST00000478250 GAGE12JA6NER3 117 aa11.09□□□□□ -0.63
NR4A1-205ENST00000478250 PRSS29PA6NIE9 313 aa11.09□□□□□ -0.63
NR4A1-205ENST00000478250 GAGE7O76087 117 aa11.09□□□□□ -0.63
NR4A1-205ENST00000478250 GAGE12FP0CL80 117 aa11.09□□□□□ -0.63
NR4A1-205ENST00000478250 GAGE12GP0CL81 117 aa11.09□□□□□ -0.63
NR4A1-205ENST00000478250 GAGE12IP0CL82 117 aa11.09□□□□□ -0.63
NR4A1-205ENST00000478250 SCGB1C2P0DMR2 95 aa11.09□□□□□ -0.63
NR4A1-205ENST00000478250 GAGE2BQ13066 116 aa11.09□□□□□ -0.63
NR4A1-205ENST00000478250 GAGE4Q13068 117 aa11.09□□□□□ -0.63
NR4A1-205ENST00000478250 GAGE2EQ4V326 116 aa11.09□□□□□ -0.63
NR4A1-205ENST00000478250 C9orf139Q6ZV77 190 aa11.09□□□□□ -0.63
NR4A1-205ENST00000478250 GAGE2DQ9UEU5 116 aa11.09□□□□□ -0.63
NR4A1-205ENST00000478250 LENEPQ9Y5L5 61 aa11.09□□□□□ -0.63
NR4A1-205ENST00000478250 CSMD2Q7Z408 3487 aa11.09□□□□□ -0.63
NR4A1-205ENST00000478250 A0A096LNT2 108 aa11.08□□□□□ -0.64
NR4A1-205ENST00000478250 H3BUA1 57 aa11.08□□□□□ -0.64
NR4A1-205ENST00000478250 H3BUX3 64 aa11.08□□□□□ -0.64
NR4A1-205ENST00000478250 SNCGO76070 127 aa11.08□□□□□ -0.64
NR4A1-205ENST00000478250 IGHG2P01859 326 aa11.08□□□□□ -0.64
NR4A1-205ENST00000478250 FHL3Q13643 280 aa11.08□□□□□ -0.64
NR4A1-205ENST00000478250 AGRNO00468 2067 aa11.08□□□□□ -0.64
NR4A1-205ENST00000478250 PDZD2O15018 2839 aa11.07□□□□□ -0.64
NR4A1-205ENST00000478250 LOC107984156A0A0G2JMH3 177 aa11.07□□□□□ -0.64
NR4A1-205ENST00000478250 ZNF815PA8K554 130 aa11.07□□□□□ -0.64
NR4A1-205ENST00000478250 M0R381 172 aa11.07□□□□□ -0.64
NR4A1-205ENST00000478250 S100A4P26447 101 aaKnown RBP11.07□□□□□ -0.64
NR4A1-205ENST00000478250 SRSF9Q13242 221 aaKnown RBP eCLIP11.07□□□□□ -0.64
NR4A1-205ENST00000478250 NDUFA11Q86Y39 141 aa11.07□□□□□ -0.64
NR4A1-205ENST00000478250 ARL17AQ8IVW1 177 aa11.07□□□□□ -0.64
NR4A1-205ENST00000478250 C10orf126Q8N4M7 172 aa11.07□□□□□ -0.64
NR4A1-205ENST00000478250 LINC01356Q8N9X3 169 aa11.07□□□□□ -0.64
NR4A1-205ENST00000478250 SUMO2P61956 95 aaKnown RBP11.07□□□□□ -0.64
NR4A1-205ENST00000478250 SCGB1D4Q6XE38 83 aa11.07□□□□□ -0.64
NR4A1-205ENST00000478250 Q96MF0 132 aa11.07□□□□□ -0.64
NR4A1-205ENST00000478250 PRADC1Q9BSG0 188 aa11.07□□□□□ -0.64
NR4A1-205ENST00000478250 KLK15Q9H2R5 256 aa11.07□□□□□ -0.64
NR4A1-205ENST00000478250 DPH3P1Q9H4G8 78 aa11.07□□□□□ -0.64
NR4A1-205ENST00000478250 SS18L2Q9UHA2 77 aa11.07□□□□□ -0.64
NR4A1-205ENST00000478250 TRAV21A0A0B4J279 112 aa11.06□□□□□ -0.64
NR4A1-205ENST00000478250 AVPP01185 164 aa11.06□□□□□ -0.64
NR4A1-205ENST00000478250 NDUFV3P56181 108 aaKnown RBP11.06□□□□□ -0.64
NR4A1-205ENST00000478250 LY6EQ16553 131 aa11.06□□□□□ -0.64
NR4A1-205ENST00000478250 OR10J6PQ8NGY7 276 aa11.06□□□□□ -0.64
NR4A1-205ENST00000478250 GLMPQ8WWB7 406 aa11.06□□□□□ -0.64
NR4A1-205ENST00000478250 U3KQE9 123 aa11.06□□□□□ -0.64
NR4A1-205ENST00000478250 PRRC2AP48634 2157 aaKnown RBP11.06□□□□□ -0.64
NR4A1-205ENST00000478250 TRBV7-9A0A0J9YWB2 115 aa11.05□□□□□ -0.64
NR4A1-205ENST00000478250 RNF223E7ERA6 249 aa11.05□□□□□ -0.64
NR4A1-205ENST00000478250 MGPP08493 103 aa11.05□□□□□ -0.64
NR4A1-205ENST00000478250 P0DMU3 169 aa11.05□□□□□ -0.64
NR4A1-205ENST00000478250 FAM231AP0DMU4 169 aa11.05□□□□□ -0.64
NR4A1-205ENST00000478250 FAM231CP0DMU5 169 aa11.05□□□□□ -0.64
NR4A1-205ENST00000478250 LINC00477Q96M19 166 aa11.05□□□□□ -0.64
NR4A1-205ENST00000478250 IFITM1P13164 125 aa11.05□□□□□ -0.64
NR4A1-205ENST00000478250 RPL13AP40429 203 aaKnown RBP11.05□□□□□ -0.64
NR4A1-205ENST00000478250 RPL32P62910 135 aaKnown RBP11.05□□□□□ -0.64
NR4A1-205ENST00000478250 KRTAP1-3Q8IUG1 177 aa11.05□□□□□ -0.64
NR4A1-205ENST00000478250 ANKRD29Q8N6D5 301 aa11.05□□□□□ -0.64
NR4A1-205ENST00000478250 LINC00527Q9UJ94 153 aa11.05□□□□□ -0.64
NR4A1-205ENST00000478250 ZNF580Q9UK33 172 aa11.05□□□□□ -0.64
NR4A1-205ENST00000478250 PHLDA3Q9Y5J5 127 aa11.05□□□□□ -0.64
NR4A1-205ENST00000478250 J3KRW8 73 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 237.2 ms