RNA–Protein interactions for RNA: ENST00000478082.5

PLOD3-212, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 1,585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-212ENST00000478082 ZFP2Q6ZN57 461 aa12.84□□□□□ -0.35
PLOD3-212ENST00000478082 Q6ZR54 194 aa12.84□□□□□ -0.35
PLOD3-212ENST00000478082 SMIM7Q9BQ49 75 aa12.84□□□□□ -0.35
PLOD3-212ENST00000478082 MRPS16Q9Y3D3 137 aaKnown RBP12.84□□□□□ -0.35
PLOD3-212ENST00000478082 TRBV6-4A0A1B0GX49 114 aa12.83□□□□□ -0.36
PLOD3-212ENST00000478082 FAM3BP58499 235 aaPredicted RBP12.83□□□□□ -0.36
PLOD3-212ENST00000478082 NEGR1Q7Z3B1 354 aa12.83□□□□□ -0.36
PLOD3-212ENST00000478082 FAT2Q9NYQ8 4349 aa12.82□□□□□ -0.36
PLOD3-212ENST00000478082 CIDEAO60543 219 aa12.82□□□□□ -0.36
PLOD3-212ENST00000478082 RHOHQ15669 191 aa12.82□□□□□ -0.36
PLOD3-212ENST00000478082 FER1L6-AS1Q8NA97 138 aa12.82□□□□□ -0.36
PLOD3-212ENST00000478082 UPK3BQ9BT76 320 aa12.82□□□□□ -0.36
PLOD3-212ENST00000478082 Q9H8V8 135 aa12.82□□□□□ -0.36
PLOD3-212ENST00000478082 ZNF727A8MUV8 499 aa12.81□□□□□ -0.36
PLOD3-212ENST00000478082 NDUFS6O75380 124 aaKnown RBP12.81□□□□□ -0.36
PLOD3-212ENST00000478082 SPANXN1Q5VSR9 72 aa12.81□□□□□ -0.36
PLOD3-212ENST00000478082 KRTAP1-5Q9BYS1 174 aa12.81□□□□□ -0.36
PLOD3-212ENST00000478082 BIN3Q9NQY0 253 aa12.81□□□□□ -0.36
PLOD3-212ENST00000478082 MSRB1Q9NZV6 116 aa12.81□□□□□ -0.36
PLOD3-212ENST00000478082 RPS20P60866 119 aaKnown RBP12.81□□□□□ -0.36
PLOD3-212ENST00000478082 LINC01551Q86U37 167 aa12.81□□□□□ -0.36
PLOD3-212ENST00000478082 PRADC1Q9BSG0 188 aa12.81□□□□□ -0.36
PLOD3-212ENST00000478082 RPP21Q9H633 154 aaKnown RBP12.81□□□□□ -0.36
PLOD3-212ENST00000478082 NBDYA0A0U1RRE5 68 aa12.8□□□□□ -0.36
PLOD3-212ENST00000478082 LYZL1Q6UWQ5 148 aa12.8□□□□□ -0.36
PLOD3-212ENST00000478082 GAGE12JA6NER3 117 aa12.79□□□□□ -0.36
PLOD3-212ENST00000478082 RAB14P61106 215 aa12.79□□□□□ -0.36
PLOD3-212ENST00000478082 GAGE1Q13065 139 aa12.79□□□□□ -0.36
PLOD3-212ENST00000478082 GAGE4Q13068 117 aa12.79□□□□□ -0.36
PLOD3-212ENST00000478082 GAGE5Q13069 117 aa12.79□□□□□ -0.36
PLOD3-212ENST00000478082 GAGE13Q4V321 117 aa12.79□□□□□ -0.36
PLOD3-212ENST00000478082 RHODO00212 210 aa12.78□□□□□ -0.36
PLOD3-212ENST00000478082 GTSF1Q8WW33 167 aa12.78□□□□□ -0.36
PLOD3-212ENST00000478082 LY96Q9Y6Y9 160 aa12.78□□□□□ -0.36
PLOD3-212ENST00000478082 RTL8CO15255 209 aa12.77□□□□□ -0.36
PLOD3-212ENST00000478082 LINC00694P0DN24 101 aa12.77□□□□□ -0.36
PLOD3-212ENST00000478082 PEA15Q15121 130 aa12.77□□□□□ -0.36
PLOD3-212ENST00000478082 WFDC10BQ8IUB3 73 aa12.77□□□□□ -0.36
PLOD3-212ENST00000478082 KIF25-AS1Q9Y6Z4 181 aa12.77□□□□□ -0.36
PLOD3-212ENST00000478082 XKRY2A2RUG3 117 aa12.77□□□□□ -0.37
PLOD3-212ENST00000478082 GATCO43716 136 aaKnown RBP12.77□□□□□ -0.37
PLOD3-212ENST00000478082 ERVFC1-1P60608 527 aa12.77□□□□□ -0.37
PLOD3-212ENST00000478082 FAM231DQ6ZW35 169 aa12.77□□□□□ -0.37
PLOD3-212ENST00000478082 LINC00315P59091 139 aa12.76□□□□□ -0.37
PLOD3-212ENST00000478082 ZNF56Q15929 161 aa12.76□□□□□ -0.37
PLOD3-212ENST00000478082 DNAH17Q9UFH2 4485 aa12.76□□□□□ -0.37
PLOD3-212ENST00000478082 CTRLP40313 264 aa12.75□□□□□ -0.37
PLOD3-212ENST00000478082 RPL23P62829 140 aaKnown RBP12.75□□□□□ -0.37
PLOD3-212ENST00000478082 COMMD7Q86VX2 200 aa12.75□□□□□ -0.37
PLOD3-212ENST00000478082 SIVA1O15304 175 aa12.74□□□□□ -0.37
PLOD3-212ENST00000478082 ATP6V0E2Q8NHE4 81 aa12.74□□□□□ -0.37
PLOD3-212ENST00000478082 AP1S3Q96PC3 154 aa12.74□□□□□ -0.37
PLOD3-212ENST00000478082 A0A1W2PPQ1 181 aa12.73□□□□□ -0.37
PLOD3-212ENST00000478082 F2Z2F3 143 aa12.73□□□□□ -0.37
PLOD3-212ENST00000478082 NTF3P20783 257 aa12.73□□□□□ -0.37
PLOD3-212ENST00000478082 EVI2AP22794 236 aa12.73□□□□□ -0.37
PLOD3-212ENST00000478082 CACNG7P62955 275 aa12.73□□□□□ -0.37
PLOD3-212ENST00000478082 TMEM241Q24JQ0 296 aa12.73□□□□□ -0.37
PLOD3-212ENST00000478082 ISOC2Q96AB3 205 aa12.73□□□□□ -0.37
PLOD3-212ENST00000478082 FAM74A3Q4VXF1 159 aa12.73□□□□□ -0.37
PLOD3-212ENST00000478082 HECTD4Q9Y4D8 3996 aa12.72□□□□□ -0.37
PLOD3-212ENST00000478082 MGPP08493 103 aa12.72□□□□□ -0.37
PLOD3-212ENST00000478082 RAB4BP61018 213 aa12.72□□□□□ -0.37
PLOD3-212ENST00000478082 ADIRFQ15847 76 aa12.72□□□□□ -0.37
PLOD3-212ENST00000478082 C1orf134Q5TEV5 83 aa12.72□□□□□ -0.37
PLOD3-212ENST00000478082 SH2D6Q7Z4S9 175 aa12.72□□□□□ -0.37
PLOD3-212ENST00000478082 PGLYRP4Q96LB8 373 aa12.72□□□□□ -0.37
PLOD3-212ENST00000478082 SMDT1Q9H4I9 107 aa12.72□□□□□ -0.37
PLOD3-212ENST00000478082 NAT8Q9UHE5 227 aa12.72□□□□□ -0.37
PLOD3-212ENST00000478082 F5H697 171 aa12.71□□□□□ -0.37
PLOD3-212ENST00000478082 NEXN-AS1Q8NBZ9 246 aa12.71□□□□□ -0.37
PLOD3-212ENST00000478082 CNFNQ9BYD5 112 aa12.71□□□□□ -0.37
PLOD3-212ENST00000478082 GTSF1LQ9H1H1 148 aa12.71□□□□□ -0.37
PLOD3-212ENST00000478082 OSTCQ9NRP0 149 aa12.71□□□□□ -0.37
PLOD3-212ENST00000478082 V9GYV3 84 aa12.71□□□□□ -0.37
PLOD3-212ENST00000478082 SMIM17P0DL12 118 aa12.7□□□□□ -0.38
PLOD3-212ENST00000478082 FOXA3P55318 350 aaPredicted RBP12.7□□□□□ -0.38
PLOD3-212ENST00000478082 TIRAPP58753 221 aa12.7□□□□□ -0.38
PLOD3-212ENST00000478082 TWIST1Q15672 202 aa12.7□□□□□ -0.38
PLOD3-212ENST00000478082 CT83Q5H943 113 aa12.7□□□□□ -0.38
PLOD3-212ENST00000478082 SOHLH1Q5JUK2 328 aa12.7□□□□□ -0.38
PLOD3-212ENST00000478082 LOC105371267A0A1B0GV96 52 aa12.69□□□□□ -0.38
PLOD3-212ENST00000478082 A8MWL6 223 aa12.69□□□□□ -0.38
PLOD3-212ENST00000478082 C6orf223Q8N319 242 aa12.69□□□□□ -0.38
PLOD3-212ENST00000478082 TMA7Q9Y2S6 64 aaKnown RBP12.69□□□□□ -0.38
PLOD3-212ENST00000478082 TNFRSF18Q9Y5U5 241 aa12.69□□□□□ -0.38
PLOD3-212ENST00000478082 TRBV10-1A0A0K0K1A3 114 aa12.69□□□□□ -0.38
PLOD3-212ENST00000478082 OR10J3Q5JRS4 329 aa12.69□□□□□ -0.38
PLOD3-212ENST00000478082 LELP1Q5T871 98 aa12.69□□□□□ -0.38
PLOD3-212ENST00000478082 Q8N3U1 123 aa12.69□□□□□ -0.38
PLOD3-212ENST00000478082 UBE2D3P61077 147 aa12.68□□□□□ -0.38
PLOD3-212ENST00000478082 UBE2D2P62837 147 aa12.68□□□□□ -0.38
PLOD3-212ENST00000478082 TTC32Q5I0X7 151 aa12.68□□□□□ -0.38
PLOD3-212ENST00000478082 SUMO4Q6EEV6 95 aa12.68□□□□□ -0.38
PLOD3-212ENST00000478082 WDR73Q6P4I2 378 aa12.68□□□□□ -0.38
PLOD3-212ENST00000478082 TSKUQ8WUA8 353 aa12.68□□□□□ -0.38
PLOD3-212ENST00000478082 TRBV7-3A0A075B6L6 115 aa12.67□□□□□ -0.38
PLOD3-212ENST00000478082 IGHV3-38A0A0C4DH36 116 aa12.67□□□□□ -0.38
PLOD3-212ENST00000478082 PRSS29PA6NIE9 313 aa12.67□□□□□ -0.38
PLOD3-212ENST00000478082 HIGD1CA8MV81 97 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms