RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 VCX2Q9H322 139 aa2.48□□□□□ -2.01
VPS50-214ENST00000477935 ACOT13Q9NPJ3 140 aa2.48□□□□□ -2.01
VPS50-214ENST00000477935 PXMP4Q9Y6I8 212 aa2.48□□□□□ -2.01
VPS50-214ENST00000477935 MACF1Q9UPN3 7388 aaKnown RBP2.48□□□□□ -2.01
VPS50-214ENST00000477935 MEIS3P1A6NDR6 274 aa2.47□□□□□ -2.01
VPS50-214ENST00000477935 H3BRN7 92 aa2.47□□□□□ -2.01
VPS50-214ENST00000477935 M0R2P5 195 aa2.47□□□□□ -2.01
VPS50-214ENST00000477935 NDUFS6O75380 124 aaKnown RBP2.47□□□□□ -2.01
VPS50-214ENST00000477935 HYPMO75409 117 aa2.47□□□□□ -2.01
VPS50-214ENST00000477935 CRPP02741 224 aa2.47□□□□□ -2.01
VPS50-214ENST00000477935 MGST1P10620 155 aaKnown RBP2.47□□□□□ -2.01
VPS50-214ENST00000477935 RAB11AP62491 216 aa2.47□□□□□ -2.01
VPS50-214ENST00000477935 MAJINQ3KP22 176 aa2.47□□□□□ -2.01
VPS50-214ENST00000477935 ARRDC1Q8N5I2 433 aa2.47□□□□□ -2.01
VPS50-214ENST00000477935 CYB561D1Q8N8Q1 229 aa2.47□□□□□ -2.01
VPS50-214ENST00000477935 INO80EQ8NBZ0 244 aaPredicted RBP2.47□□□□□ -2.01
VPS50-214ENST00000477935 OR1L4Q8NGR5 311 aa2.47□□□□□ -2.01
VPS50-214ENST00000477935 LYPD6BQ8NI32 183 aa2.47□□□□□ -2.01
VPS50-214ENST00000477935 DNAJC30Q96LL9 226 aa2.47□□□□□ -2.01
VPS50-214ENST00000477935 FAM19A4Q96LR4 140 aa2.47□□□□□ -2.01
VPS50-214ENST00000477935 SRRQ9GZT4 340 aa2.47□□□□□ -2.01
VPS50-214ENST00000477935 FAM107BQ9H098 131 aa2.47□□□□□ -2.01
VPS50-214ENST00000477935 SLC39A9Q9NUM3 307 aa2.47□□□□□ -2.01
VPS50-214ENST00000477935 HIGD1AQ9Y241 93 aa2.47□□□□□ -2.01
VPS50-214ENST00000477935 PKIGQ9Y2B9 76 aa2.47□□□□□ -2.01
VPS50-214ENST00000477935 LINC00854A0A1B0GVQ3 168 aa2.46□□□□□ -2.02
VPS50-214ENST00000477935 HLA-DQA1P01909 254 aa2.46□□□□□ -2.02
VPS50-214ENST00000477935 OR4E1P0C645 316 aa2.46□□□□□ -2.02
VPS50-214ENST00000477935 TBPP20226 339 aa2.46□□□□□ -2.02
VPS50-214ENST00000477935 RAB3BP20337 219 aa2.46□□□□□ -2.02
VPS50-214ENST00000477935 CXCL5P42830 114 aa2.46□□□□□ -2.02
VPS50-214ENST00000477935 INPP1P49441 399 aa2.46□□□□□ -2.02
VPS50-214ENST00000477935 UBE2D1P51668 147 aa2.46□□□□□ -2.02
VPS50-214ENST00000477935 PLP1P60201 277 aa2.46□□□□□ -2.02
VPS50-214ENST00000477935 TSPAN5P62079 268 aa2.46□□□□□ -2.02
VPS50-214ENST00000477935 BTN1A1Q13410 526 aa2.46□□□□□ -2.02
VPS50-214ENST00000477935 MOBPQ13875 183 aa2.46□□□□□ -2.02
VPS50-214ENST00000477935 LINC00483Q53H64 154 aa2.46□□□□□ -2.02
VPS50-214ENST00000477935 ENHOQ6UWT2 76 aa2.46□□□□□ -2.02
VPS50-214ENST00000477935 Q6ZQT7 251 aa2.46□□□□□ -2.02
VPS50-214ENST00000477935 LINC00173Q6ZV60 143 aa2.46□□□□□ -2.02
VPS50-214ENST00000477935 BPIFA4PQ86YQ2 179 aa2.46□□□□□ -2.02
VPS50-214ENST00000477935 YIPF6Q96EC8 236 aa2.46□□□□□ -2.02
VPS50-214ENST00000477935 C9orf16Q9BUW7 83 aa2.46□□□□□ -2.02
VPS50-214ENST00000477935 IFT46Q9NQC8 304 aa2.46□□□□□ -2.02
VPS50-214ENST00000477935 CARHSP1Q9Y2V2 147 aaKnown RBP2.46□□□□□ -2.02
VPS50-214ENST00000477935 IGLV10-54A0A075B6I4 117 aa2.45□□□□□ -2.02
VPS50-214ENST00000477935 TRAV6A0A075B6T7 132 aa2.45□□□□□ -2.02
VPS50-214ENST00000477935 C3orf85A0A1B0GTC6 90 aa2.45□□□□□ -2.02
VPS50-214ENST00000477935 MRPS12O15235 138 aaKnown RBP2.45□□□□□ -2.02
VPS50-214ENST00000477935 CDS2O95674 445 aa2.45□□□□□ -2.02
VPS50-214ENST00000477935 PMP2P02689 132 aa2.45□□□□□ -2.02
VPS50-214ENST00000477935 IL5P05113 134 aa2.45□□□□□ -2.02
VPS50-214ENST00000477935 OR5G3P0C626 314 aa2.45□□□□□ -2.02
VPS50-214ENST00000477935 GZMBP10144 247 aa2.45□□□□□ -2.02
VPS50-214ENST00000477935 MYL9P24844 172 aa2.45□□□□□ -2.02
VPS50-214ENST00000477935 ZNF138P52744 262 aa2.45□□□□□ -2.02
VPS50-214ENST00000477935 SEC61GP60059 68 aa2.45□□□□□ -2.02
VPS50-214ENST00000477935 UBE2MP61081 183 aaKnown RBP2.45□□□□□ -2.02
VPS50-214ENST00000477935 PKIAP61925 76 aa2.45□□□□□ -2.02
VPS50-214ENST00000477935 COX6A2Q02221 97 aa2.45□□□□□ -2.02
VPS50-214ENST00000477935 AHSA2Q719I0 299 aa2.45□□□□□ -2.02
VPS50-214ENST00000477935 ATP5SQ99766 215 aa2.45□□□□□ -2.02
VPS50-214ENST00000477935 AGPAT4-IT1Q9H0P7 198 aa2.45□□□□□ -2.02
VPS50-214ENST00000477935 FXYD6Q9H0Q3 95 aa2.45□□□□□ -2.02
VPS50-214ENST00000477935 MIXL1Q9H2W2 232 aa2.45□□□□□ -2.02
VPS50-214ENST00000477935 RHBDL2Q9NX52 303 aa2.45□□□□□ -2.02
VPS50-214ENST00000477935 PRELID1Q9Y255 219 aa2.45□□□□□ -2.02
VPS50-214ENST00000477935 IGKV2-24A0A0C4DH68 120 aa2.44□□□□□ -2.02
VPS50-214ENST00000477935 TMEM262E9PQX1 116 aa2.44□□□□□ -2.02
VPS50-214ENST00000477935 WRBO00258 174 aa2.44□□□□□ -2.02
VPS50-214ENST00000477935 SLC17A3O00476 420 aa2.44□□□□□ -2.02
VPS50-214ENST00000477935 TSPAN13O95857 204 aa2.44□□□□□ -2.02
VPS50-214ENST00000477935 HIST1H1EP10412 219 aaKnown RBP2.44□□□□□ -2.02
VPS50-214ENST00000477935 HLA-DMAP28067 261 aa2.44□□□□□ -2.02
VPS50-214ENST00000477935 RCVRNP35243 200 aa2.44□□□□□ -2.02
VPS50-214ENST00000477935 PIGPP57054 158 aa2.44□□□□□ -2.02
VPS50-214ENST00000477935 FABP5Q01469 135 aa2.44□□□□□ -2.02
VPS50-214ENST00000477935 ASB16-AS1Q495Z4 193 aa2.44□□□□□ -2.02
VPS50-214ENST00000477935 TMEM78Q5T7P6 136 aa2.44□□□□□ -2.02
VPS50-214ENST00000477935 LAIR2Q6ISS4 152 aa2.44□□□□□ -2.02
VPS50-214ENST00000477935 OR2G3Q8NGZ4 309 aa2.44□□□□□ -2.02
VPS50-214ENST00000477935 ZFAND1Q8TCF1 268 aa2.44□□□□□ -2.02
VPS50-214ENST00000477935 DTD1Q8TEA8 209 aa2.44□□□□□ -2.02
VPS50-214ENST00000477935 TP53RKQ96S44 253 aa2.44□□□□□ -2.02
VPS50-214ENST00000477935 MGLLQ99685 303 aa2.44□□□□□ -2.02
VPS50-214ENST00000477935 SAMD10Q9BYL1 202 aa2.44□□□□□ -2.02
VPS50-214ENST00000477935 FKBP14Q9NWM8 211 aa2.44□□□□□ -2.02
VPS50-214ENST00000477935 COPZ2Q9P299 210 aa2.44□□□□□ -2.02
VPS50-214ENST00000477935 ANAPC10Q9UM13 185 aa2.44□□□□□ -2.02
VPS50-214ENST00000477935 LSM2Q9Y333 95 aaKnown RBP2.44□□□□□ -2.02
VPS50-214ENST00000477935 NEBP20929 6669 aa2.44□□□□□ -2.02
VPS50-214ENST00000477935 PEX7O00628 323 aa2.43□□□□□ -2.02
VPS50-214ENST00000477935 MT-ND6P03923 174 aa2.43□□□□□ -2.02
VPS50-214ENST00000477935 TLX1NBP0CAT3 122 aa2.43□□□□□ -2.02
VPS50-214ENST00000477935 SULT1A3P0DMM9 295 aa2.43□□□□□ -2.02
VPS50-214ENST00000477935 SULT1A4P0DMN0 295 aa2.43□□□□□ -2.02
VPS50-214ENST00000477935 LINC00694P0DN24 101 aa2.43□□□□□ -2.02
VPS50-214ENST00000477935 AKR1C4P17516 323 aa2.43□□□□□ -2.02
VPS50-214ENST00000477935 CTAG1AP78358 180 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms