RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 ITLN2Q8WWU7 325 aaPredicted RBP7.43□□□□□ -1.22
CMC1-209ENST00000477739 PIMREGQ9BSJ6 248 aa7.43□□□□□ -1.22
CMC1-209ENST00000477739 NIPBLQ6KC79 2804 aaeCLIP7.43□□□□□ -1.22
CMC1-209ENST00000477739 IGHV3-53P01767 116 aa7.43□□□□□ -1.22
CMC1-209ENST00000477739 KIR2DL4Q99706 377 aa7.43□□□□□ -1.22
CMC1-209ENST00000477739 SLC50A1Q9BRV3 221 aa7.43□□□□□ -1.22
CMC1-209ENST00000477739 IGHV4-61A0A0C4DH41 118 aa7.43□□□□□ -1.22
CMC1-209ENST00000477739 CENPVL3A0A0U1RRI6 287 aa7.43□□□□□ -1.22
CMC1-209ENST00000477739 IGLL5B9A064 214 aa7.43□□□□□ -1.22
CMC1-209ENST00000477739 IGLC6P0CF74 106 aa7.43□□□□□ -1.22
CMC1-209ENST00000477739 RAB9AP51151 201 aa7.43□□□□□ -1.22
CMC1-209ENST00000477739 LMO4P61968 165 aa7.43□□□□□ -1.22
CMC1-209ENST00000477739 DAND5Q8N907 189 aa7.43□□□□□ -1.22
CMC1-209ENST00000477739 GCN1Q92616 2671 aaKnown RBP7.43□□□□□ -1.22
CMC1-209ENST00000477739 TRAV21A0A0B4J279 112 aa7.42□□□□□ -1.22
CMC1-209ENST00000477739 LGALS3P17931 250 aaKnown RBP7.42□□□□□ -1.22
CMC1-209ENST00000477739 SYT8Q8NBV8 401 aa7.42□□□□□ -1.22
CMC1-209ENST00000477739 TRAV8-2A0A0B4J237 113 aa7.42□□□□□ -1.22
CMC1-209ENST00000477739 H7C1H1 209 aa7.42□□□□□ -1.22
CMC1-209ENST00000477739 Q8N6K4 173 aa7.42□□□□□ -1.22
CMC1-209ENST00000477739 SIGMAR1Q99720 223 aa7.42□□□□□ -1.22
CMC1-209ENST00000477739 ZNF876PQ49A33 203 aa7.42□□□□□ -1.22
CMC1-209ENST00000477739 GATD1Q8NB37 220 aa7.42□□□□□ -1.22
CMC1-209ENST00000477739 HHLA3Q9XRX5 114 aa7.42□□□□□ -1.22
CMC1-209ENST00000477739 A8MZ25 164 aa7.41□□□□□ -1.22
CMC1-209ENST00000477739 MDFICQ9P1T7 246 aa7.41□□□□□ -1.22
CMC1-209ENST00000477739 ZNF580Q9UK33 172 aa7.41□□□□□ -1.22
CMC1-209ENST00000477739 MOB4Q9Y3A3 225 aa7.41□□□□□ -1.22
CMC1-209ENST00000477739 SDHAF1A6NFY7 115 aa7.41□□□□□ -1.22
CMC1-209ENST00000477739 F8VRH5 84 aa7.41□□□□□ -1.22
CMC1-209ENST00000477739 EBI3Q14213 229 aa7.41□□□□□ -1.22
CMC1-209ENST00000477739 ZNF493Q6ZR52 646 aa7.41□□□□□ -1.22
CMC1-209ENST00000477739 MUC4Q99102 2169 aa7.41□□□□□ -1.22
CMC1-209ENST00000477739 OR5A1Q8NGJ0 315 aa7.41□□□□□ -1.22
CMC1-209ENST00000477739 DPH3P1Q9H4G8 78 aa7.41□□□□□ -1.22
CMC1-209ENST00000477739 IGSF10Q6WRI0 2623 aa7.4□□□□□ -1.22
CMC1-209ENST00000477739 A0A087WX48 190 aa7.4□□□□□ -1.22
CMC1-209ENST00000477739 MYMXA0A1B0GTQ4 84 aa7.4□□□□□ -1.22
CMC1-209ENST00000477739 GAGE12HA6NDE8 117 aa7.4□□□□□ -1.22
CMC1-209ENST00000477739 C11orf86A6NJI1 115 aa7.4□□□□□ -1.22
CMC1-209ENST00000477739 ZNF48Q96MX3 618 aaPredicted RBP7.4□□□□□ -1.22
CMC1-209ENST00000477739 ZFAND3Q9H8U3 227 aa7.4□□□□□ -1.22
CMC1-209ENST00000477739 CLPSL1A2RUU4 121 aa7.4□□□□□ -1.22
CMC1-209ENST00000477739 PROK1P58294 105 aa7.4□□□□□ -1.22
CMC1-209ENST00000477739 FLNAP21333 2647 aaKnown RBP7.4□□□□□ -1.22
CMC1-209ENST00000477739 TRBV7-1A0A0A6YYK4 115 aa7.4□□□□□ -1.23
CMC1-209ENST00000477739 TRBV6-1A0A0K0K1D8 114 aa7.4□□□□□ -1.23
CMC1-209ENST00000477739 G3V4G9 280 aa7.4□□□□□ -1.23
CMC1-209ENST00000477739 HERVK_113P61574 105 aa7.4□□□□□ -1.23
CMC1-209ENST00000477739 C3orf56Q8N813 242 aa7.4□□□□□ -1.23
CMC1-209ENST00000477739 RASL10AQ92737 203 aa7.4□□□□□ -1.23
CMC1-209ENST00000477739 SPAG8Q99932 426 aaPredicted RBP7.4□□□□□ -1.23
CMC1-209ENST00000477739 DGAT2L7PQ6IED9 249 aa7.39□□□□□ -1.23
CMC1-209ENST00000477739 AJUBAQ96IF1 538 aa7.39□□□□□ -1.23
CMC1-209ENST00000477739 IGHV1-69DA0A0B4J2H0 117 aa7.39□□□□□ -1.23
CMC1-209ENST00000477739 C9JAW5 83 aa7.39□□□□□ -1.23
CMC1-209ENST00000477739 NDUFS8O00217 210 aa7.39□□□□□ -1.23
CMC1-209ENST00000477739 IGHV1-69P01742 117 aa7.39□□□□□ -1.23
CMC1-209ENST00000477739 C5orf56Q8N8D9 126 aa7.39□□□□□ -1.23
CMC1-209ENST00000477739 UBE2E2Q96LR5 201 aa7.39□□□□□ -1.23
CMC1-209ENST00000477739 IGHV7-4-1A0A0J9YVY3 117 aa7.39□□□□□ -1.23
CMC1-209ENST00000477739 IGHV4-59P01825 116 aa7.39□□□□□ -1.23
CMC1-209ENST00000477739 BAALCQ8WXS3 180 aa7.39□□□□□ -1.23
CMC1-209ENST00000477739 TRPT1Q86TN4 253 aaKnown RBP7.38□□□□□ -1.23
CMC1-209ENST00000477739 TMEM190Q8WZ59 177 aa7.38□□□□□ -1.23
CMC1-209ENST00000477739 RBAKDNA6NC62 111 aa7.38□□□□□ -1.23
CMC1-209ENST00000477739 ORMDL2Q53FV1 153 aa7.38□□□□□ -1.23
CMC1-209ENST00000477739 IGHV4-30-2A0A087WSY4 118 aa7.38□□□□□ -1.23
CMC1-209ENST00000477739 TRAV8-3A0A0A6YYJ7 113 aa7.38□□□□□ -1.23
CMC1-209ENST00000477739 LGALS1P09382 135 aaKnown RBP7.38□□□□□ -1.23
CMC1-209ENST00000477739 PLNP26678 52 aa7.38□□□□□ -1.23
CMC1-209ENST00000477739 CFHR3Q02985 330 aa7.38□□□□□ -1.23
CMC1-209ENST00000477739 LINC01559Q495D7 138 aa7.38□□□□□ -1.23
CMC1-209ENST00000477739 NRACQ8N912 160 aa7.38□□□□□ -1.23
CMC1-209ENST00000477739 A0A0J9YXV3 536 aa7.37□□□□□ -1.23
CMC1-209ENST00000477739 Q6ZSV7 163 aa7.37□□□□□ -1.23
CMC1-209ENST00000477739 RS1O15537 224 aa7.37□□□□□ -1.23
CMC1-209ENST00000477739 SPINK8P0C7L1 97 aa7.37□□□□□ -1.23
CMC1-209ENST00000477739 SUMO4Q6EEV6 95 aa7.37□□□□□ -1.23
CMC1-209ENST00000477739 FOXI2Q6ZQN5 318 aa7.37□□□□□ -1.23
CMC1-209ENST00000477739 USP24Q9UPU5 2620 aa7.36□□□□□ -1.23
CMC1-209ENST00000477739 CD28P10747 220 aa7.36□□□□□ -1.23
CMC1-209ENST00000477739 RRN3P1Q2M238 152 aa7.36□□□□□ -1.23
CMC1-209ENST00000477739 UFSP1Q6NVU6 142 aa7.36□□□□□ -1.23
CMC1-209ENST00000477739 C9orf139Q6ZV77 190 aa7.36□□□□□ -1.23
CMC1-209ENST00000477739 TRBV20-1A0A075B6N2 111 aa7.36□□□□□ -1.23
CMC1-209ENST00000477739 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.36□□□□□ -1.23
CMC1-209ENST00000477739 IGKV2-29A2NJV5 120 aaPredicted RBP7.36□□□□□ -1.23
CMC1-209ENST00000477739 CKS1BP61024 79 aa7.36□□□□□ -1.23
CMC1-209ENST00000477739 VCX2Q9H322 139 aa7.36□□□□□ -1.23
CMC1-209ENST00000477739 C11orf68Q9H3H3 251 aaKnown RBP7.36□□□□□ -1.23
CMC1-209ENST00000477739 A6NJY4 79 aa7.36□□□□□ -1.23
CMC1-209ENST00000477739 MXRA5Q9NR99 2828 aa7.35□□□□□ -1.23
CMC1-209ENST00000477739 DEFB131AP59861 70 aa7.35□□□□□ -1.23
CMC1-209ENST00000477739 C16orf54Q6UWD8 224 aa7.35□□□□□ -1.23
CMC1-209ENST00000477739 APRG1Q8IVJ8 170 aa7.35□□□□□ -1.23
CMC1-209ENST00000477739 ZFAND2AQ8N6M9 145 aa7.35□□□□□ -1.23
CMC1-209ENST00000477739 PRORYQ9H606 182 aa7.35□□□□□ -1.23
CMC1-209ENST00000477739 U3KQK5 164 aa7.35□□□□□ -1.23
CMC1-209ENST00000477739 TOMM7Q9P0U1 55 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms