RNA–Protein interactions for RNA: ENST00000477552.1

PTPRD-209, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 4

Gene PTPRD, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-209ENST00000477552 PLEKHB2Q96CS7 222 aa6.25□□□□□ -1.41
PTPRD-209ENST00000477552 ZNF479Q96JC4 524 aa6.25□□□□□ -1.41
PTPRD-209ENST00000477552 DNAJC30Q96LL9 226 aa6.25□□□□□ -1.41
PTPRD-209ENST00000477552 SPAG8Q99932 426 aaPredicted RBP6.25□□□□□ -1.41
PTPRD-209ENST00000477552 VPS25Q9BRG1 176 aa6.25□□□□□ -1.41
PTPRD-209ENST00000477552 MDFICQ9P1T7 246 aa6.25□□□□□ -1.41
PTPRD-209ENST00000477552 TP53TG1Q9Y2A0 90 aa6.25□□□□□ -1.41
PTPRD-209ENST00000477552 CHD8Q9HCK8 2581 aa6.25□□□□□ -1.41
PTPRD-209ENST00000477552 AKAP6Q13023 2319 aa6.24□□□□□ -1.41
PTPRD-209ENST00000477552 TRBV7-3A0A075B6L6 115 aa6.24□□□□□ -1.41
PTPRD-209ENST00000477552 ZNF815PA8K554 130 aa6.24□□□□□ -1.41
PTPRD-209ENST00000477552 J3KRW8 73 aa6.24□□□□□ -1.41
PTPRD-209ENST00000477552 M0QY20 66 aa6.24□□□□□ -1.41
PTPRD-209ENST00000477552 ZNF688P0C7X2 276 aa6.24□□□□□ -1.41
PTPRD-209ENST00000477552 HOXD3P31249 432 aaPredicted RBP6.24□□□□□ -1.41
PTPRD-209ENST00000477552 ZNF415Q09FC8 603 aa6.24□□□□□ -1.41
PTPRD-209ENST00000477552 SRSF9Q13242 221 aaKnown RBP eCLIP6.24□□□□□ -1.41
PTPRD-209ENST00000477552 C12orf74Q32Q52 190 aa6.24□□□□□ -1.41
PTPRD-209ENST00000477552 ZNF876PQ49A33 203 aa6.24□□□□□ -1.41
PTPRD-209ENST00000477552 RNASE8Q8TDE3 154 aaKnown RBP6.24□□□□□ -1.41
PTPRD-209ENST00000477552 C4orf3Q8WVX3 66 aa6.24□□□□□ -1.41
PTPRD-209ENST00000477552 RPL39LQ96EH5 51 aaKnown RBP6.24□□□□□ -1.41
PTPRD-209ENST00000477552 PRADC1Q9BSG0 188 aa6.24□□□□□ -1.41
PTPRD-209ENST00000477552 NHP2Q9NX24 153 aaKnown RBP6.24□□□□□ -1.41
PTPRD-209ENST00000477552 PRRC2AP48634 2157 aaKnown RBP6.24□□□□□ -1.41
PTPRD-209ENST00000477552 PIEZO1Q92508 2521 aa6.24□□□□□ -1.41
PTPRD-209ENST00000477552 SMG1Q96Q15 3661 aaKnown RBP6.23□□□□□ -1.41
PTPRD-209ENST00000477552 SPTAN1Q13813 2472 aaKnown RBP6.23□□□□□ -1.41
PTPRD-209ENST00000477552 TRBV20-1A0A075B6N2 111 aa6.23□□□□□ -1.41
PTPRD-209ENST00000477552 IGLL5B9A064 214 aa6.23□□□□□ -1.41
PTPRD-209ENST00000477552 RNF223E7ERA6 249 aa6.23□□□□□ -1.41
PTPRD-209ENST00000477552 F6UB75 175 aa6.23□□□□□ -1.41
PTPRD-209ENST00000477552 M0R2P5 195 aa6.23□□□□□ -1.41
PTPRD-209ENST00000477552 CIDEAO60543 219 aa6.23□□□□□ -1.41
PTPRD-209ENST00000477552 AVPP01185 164 aa6.23□□□□□ -1.41
PTPRD-209ENST00000477552 PCP4P48539 62 aa6.23□□□□□ -1.41
PTPRD-209ENST00000477552 FXYD2P54710 66 aa6.23□□□□□ -1.41
PTPRD-209ENST00000477552 ZNF56Q15929 161 aa6.23□□□□□ -1.41
PTPRD-209ENST00000477552 RRN3P1Q2M238 152 aa6.23□□□□□ -1.41
PTPRD-209ENST00000477552 Q6ZVH6 145 aa6.23□□□□□ -1.41
PTPRD-209ENST00000477552 Q8N1Y9 231 aa6.23□□□□□ -1.41
PTPRD-209ENST00000477552 PHLDA1Q8WV24 401 aaPredicted RBP6.23□□□□□ -1.41
PTPRD-209ENST00000477552 RAX2Q96IS3 184 aa6.23□□□□□ -1.41
PTPRD-209ENST00000477552 ZNF702PQ9H963 129 aa6.23□□□□□ -1.41
PTPRD-209ENST00000477552 PKD1L2Q7Z442 2459 aa6.23□□□□□ -1.41
PTPRD-209ENST00000477552 MUC4Q99102 2169 aa6.23□□□□□ -1.41
PTPRD-209ENST00000477552 IGKV3-7A0A075B6H7 116 aa6.22□□□□□ -1.41
PTPRD-209ENST00000477552 G3V4G9 280 aa6.22□□□□□ -1.41
PTPRD-209ENST00000477552 LEPROTO15243 131 aa6.22□□□□□ -1.41
PTPRD-209ENST00000477552 CRYGDP07320 174 aa6.22□□□□□ -1.41
PTPRD-209ENST00000477552 IGHV4-31P0DP07 118 aa6.22□□□□□ -1.41
PTPRD-209ENST00000477552 PRB4P10163 310 aaPredicted RBP6.22□□□□□ -1.41
PTPRD-209ENST00000477552 LGALS3P17931 250 aaKnown RBP6.22□□□□□ -1.41
PTPRD-209ENST00000477552 SYNJ2BPP57105 145 aa6.22□□□□□ -1.41
PTPRD-209ENST00000477552 COTL1Q14019 142 aa6.22□□□□□ -1.41
PTPRD-209ENST00000477552 DEFB113Q30KQ7 82 aa6.22□□□□□ -1.41
PTPRD-209ENST00000477552 TCTEX1D4Q5JR98 221 aa6.22□□□□□ -1.41
PTPRD-209ENST00000477552 C20orf203Q8NBC4 194 aa6.22□□□□□ -1.41
PTPRD-209ENST00000477552 COPS9Q8WXC6 57 aa6.22□□□□□ -1.41
PTPRD-209ENST00000477552 RAB37Q96AX2 223 aa6.22□□□□□ -1.41
PTPRD-209ENST00000477552 DUX5Q96PT3 197 aa6.22□□□□□ -1.41
PTPRD-209ENST00000477552 SPANXA1Q9NS26 97 aa6.22□□□□□ -1.41
PTPRD-209ENST00000477552 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.21□□□□□ -1.42
PTPRD-209ENST00000477552 TMEM238C9JI98 176 aa6.21□□□□□ -1.42
PTPRD-209ENST00000477552 RPL24P83731 157 aaKnown RBP6.21□□□□□ -1.42
PTPRD-209ENST00000477552 AMTNQ6UX39 209 aa6.21□□□□□ -1.42
PTPRD-209ENST00000477552 SLC25A29Q8N8R3 303 aa6.21□□□□□ -1.42
PTPRD-209ENST00000477552 ATP6V0E2Q8NHE4 81 aa6.21□□□□□ -1.42
PTPRD-209ENST00000477552 TNFRSF18Q9Y5U5 241 aa6.21□□□□□ -1.42
PTPRD-209ENST00000477552 DCHS1Q96JQ0 3298 aa6.21□□□□□ -1.42
PTPRD-209ENST00000477552 ANKRD17O75179 2603 aaKnown RBP6.21□□□□□ -1.42
PTPRD-209ENST00000477552 H3BMM0 161 aa6.2□□□□□ -1.42
PTPRD-209ENST00000477552 J3QQQ9 107 aa6.2□□□□□ -1.42
PTPRD-209ENST00000477552 INSP01308 110 aa6.2□□□□□ -1.42
PTPRD-209ENST00000477552 UBE2D1P51668 147 aa6.2□□□□□ -1.42
PTPRD-209ENST00000477552 TMEM170BQ5T4T1 132 aa6.2□□□□□ -1.42
PTPRD-209ENST00000477552 Q6ZS46 218 aa6.2□□□□□ -1.42
PTPRD-209ENST00000477552 LCNL1Q6ZST4 164 aa6.2□□□□□ -1.42
PTPRD-209ENST00000477552 MAPKAPK5-AS1Q8N8E1 139 aa6.2□□□□□ -1.42
PTPRD-209ENST00000477552 DYNLRB2Q8TF09 96 aa6.2□□□□□ -1.42
PTPRD-209ENST00000477552 DLX4Q92988 240 aaPredicted RBP6.2□□□□□ -1.42
PTPRD-209ENST00000477552 RNF183Q96D59 192 aa6.2□□□□□ -1.42
PTPRD-209ENST00000477552 TIMM21Q9BVV7 248 aa6.2□□□□□ -1.42
PTPRD-209ENST00000477552 ASH1LQ9NR48 2969 aaKnown RBP6.19□□□□□ -1.42
PTPRD-209ENST00000477552 IGLV4-69A0A075B6H9 119 aa6.19□□□□□ -1.42
PTPRD-209ENST00000477552 A0A087WWL8 130 aa6.19□□□□□ -1.42
PTPRD-209ENST00000477552 M0QXV9 152 aa6.19□□□□□ -1.42
PTPRD-209ENST00000477552 SCGB1A1P11684 91 aa6.19□□□□□ -1.42
PTPRD-209ENST00000477552 SRD5A1P18405 259 aa6.19□□□□□ -1.42
PTPRD-209ENST00000477552 TCTAP57738 103 aa6.19□□□□□ -1.42
PTPRD-209ENST00000477552 SPINK13Q1W4C9 94 aa6.19□□□□□ -1.42
PTPRD-209ENST00000477552 RNF151Q2KHN1 245 aa6.19□□□□□ -1.42
PTPRD-209ENST00000477552 GAGE13Q4V321 117 aa6.19□□□□□ -1.42
PTPRD-209ENST00000477552 FAM74A4Q5TZK3 123 aa6.19□□□□□ -1.42
PTPRD-209ENST00000477552 Q6ZQT7 251 aa6.19□□□□□ -1.42
PTPRD-209ENST00000477552 FAM110AQ9BQ89 295 aa6.19□□□□□ -1.42
PTPRD-209ENST00000477552 MRPL16Q9NX20 251 aaKnown RBP6.19□□□□□ -1.42
PTPRD-209ENST00000477552 AGRNO00468 2067 aa6.19□□□□□ -1.42
PTPRD-209ENST00000477552 CFAP46Q8IYW2 2715 aa6.19□□□□□ -1.42
PTPRD-209ENST00000477552 A0A0J9YY99 117 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms