RNA–Protein interactions for RNA: ENST00000477087.1

CDKN1B-204, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

TSL 3

Gene CDKN1B, Length 453 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-204ENST00000477087 TRAPPC1Q9Y5R8 145 aa4.23□□□□□ -1.73
CDKN1B-204ENST00000477087 CA1P00915 261 aaPredicted RBP4.22□□□□□ -1.73
CDKN1B-204ENST00000477087 ORM1P02763 201 aa4.22□□□□□ -1.73
CDKN1B-204ENST00000477087 PPBPP02775 128 aa4.22□□□□□ -1.73
CDKN1B-204ENST00000477087 ZNF688P0C7X2 276 aa4.22□□□□□ -1.73
CDKN1B-204ENST00000477087 TRGC1P0CF51 173 aa4.22□□□□□ -1.73
CDKN1B-204ENST00000477087 DEFB131AP59861 70 aa4.22□□□□□ -1.73
CDKN1B-204ENST00000477087 NUTF2P61970 127 aaKnown RBP4.22□□□□□ -1.73
CDKN1B-204ENST00000477087 HBBP68871 147 aa4.22□□□□□ -1.73
CDKN1B-204ENST00000477087 OR10J3Q5JRS4 329 aa4.22□□□□□ -1.73
CDKN1B-204ENST00000477087 Q8TAT8 98 aa4.22□□□□□ -1.73
CDKN1B-204ENST00000477087 BORCS7Q96B45 105 aa4.22□□□□□ -1.73
CDKN1B-204ENST00000477087 TMEM191AQ9H0A3 160 aa4.22□□□□□ -1.73
CDKN1B-204ENST00000477087 NF1P21359 2839 aa4.22□□□□□ -1.73
CDKN1B-204ENST00000477087 NOTCH3Q9UM47 2321 aa4.21□□□□□ -1.74
CDKN1B-204ENST00000477087 LOC105371267A0A1B0GV96 52 aa4.21□□□□□ -1.74
CDKN1B-204ENST00000477087 C7orf71A4D174 169 aa4.21□□□□□ -1.74
CDKN1B-204ENST00000477087 SNURFLB1AK76 121 aa4.21□□□□□ -1.74
CDKN1B-204ENST00000477087 OR11H12B2RN74 326 aa4.21□□□□□ -1.74
CDKN1B-204ENST00000477087 UBE2CO00762 179 aa4.21□□□□□ -1.74
CDKN1B-204ENST00000477087 CRXO43186 299 aaPredicted RBP4.21□□□□□ -1.74
CDKN1B-204ENST00000477087 CIDEAO60543 219 aa4.21□□□□□ -1.74
CDKN1B-204ENST00000477087 NXPH4O95158 308 aa4.21□□□□□ -1.74
CDKN1B-204ENST00000477087 S100A6P06703 90 aa4.21□□□□□ -1.74
CDKN1B-204ENST00000477087 FABP9Q0Z7S8 132 aa4.21□□□□□ -1.74
CDKN1B-204ENST00000477087 FAM104BQ5XKR9 115 aa4.21□□□□□ -1.74
CDKN1B-204ENST00000477087 CFAP161Q6P656 301 aa4.21□□□□□ -1.74
CDKN1B-204ENST00000477087 MORN3Q6PF18 240 aaPredicted RBP4.21□□□□□ -1.74
CDKN1B-204ENST00000477087 TRPT1Q86TN4 253 aaKnown RBP4.21□□□□□ -1.74
CDKN1B-204ENST00000477087 TMEM256Q8N2U0 113 aa4.21□□□□□ -1.74
CDKN1B-204ENST00000477087 POM121L12Q8N7R1 296 aa4.21□□□□□ -1.74
CDKN1B-204ENST00000477087 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.21□□□□□ -1.74
CDKN1B-204ENST00000477087 FER1L6-AS1Q8NA97 138 aa4.21□□□□□ -1.74
CDKN1B-204ENST00000477087 LAMTOR2Q9Y2Q5 125 aa4.21□□□□□ -1.74
CDKN1B-204ENST00000477087 U3KQK5 164 aa4.21□□□□□ -1.74
CDKN1B-204ENST00000477087 IGKV3-7A0A075B6H7 116 aa4.2□□□□□ -1.74
CDKN1B-204ENST00000477087 IGHV1OR15-1A0A075B7D0 117 aa4.2□□□□□ -1.74
CDKN1B-204ENST00000477087 F6UB75 175 aa4.2□□□□□ -1.74
CDKN1B-204ENST00000477087 SAP30O75446 220 aa4.2□□□□□ -1.74
CDKN1B-204ENST00000477087 APCSP02743 223 aa4.2□□□□□ -1.74
CDKN1B-204ENST00000477087 NSUN5P1Q3KNT7 163 aa4.2□□□□□ -1.74
CDKN1B-204ENST00000477087 PRR9Q5T870 116 aa4.2□□□□□ -1.74
CDKN1B-204ENST00000477087 GDF5OSQ5U4N7 250 aa4.2□□□□□ -1.74
CDKN1B-204ENST00000477087 LYZL1Q6UWQ5 148 aa4.2□□□□□ -1.74
CDKN1B-204ENST00000477087 FAM159AQ6UWV7 190 aa4.2□□□□□ -1.74
CDKN1B-204ENST00000477087 PGLYRP4Q96LB8 373 aa4.2□□□□□ -1.74
CDKN1B-204ENST00000477087 JMJD1CQ15652 2540 aa4.2□□□□□ -1.74
CDKN1B-204ENST00000477087 LOC102724200A0A096LPH7 203 aaPredicted RBP4.19□□□□□ -1.74
CDKN1B-204ENST00000477087 KIR2DL5BA0A0G2JN68 375 aa4.19□□□□□ -1.74
CDKN1B-204ENST00000477087 KIR2DL5BA0A0G2JPC4 375 aa4.19□□□□□ -1.74
CDKN1B-204ENST00000477087 A8MZ25 164 aa4.19□□□□□ -1.74
CDKN1B-204ENST00000477087 PPP1R17O96001 155 aa4.19□□□□□ -1.74
CDKN1B-204ENST00000477087 ARMS2P0C7Q2 107 aa4.19□□□□□ -1.74
CDKN1B-204ENST00000477087 FRMD6-AS1P0C7T7 363 aa4.19□□□□□ -1.74
CDKN1B-204ENST00000477087 ZNF705DP0CH99 300 aaPredicted RBP4.19□□□□□ -1.74
CDKN1B-204ENST00000477087 ZNF705BP0CI00 300 aaPredicted RBP4.19□□□□□ -1.74
CDKN1B-204ENST00000477087 RNASE3P12724 160 aaKnown RBP4.19□□□□□ -1.74
CDKN1B-204ENST00000477087 NTF3P20783 257 aa4.19□□□□□ -1.74
CDKN1B-204ENST00000477087 RNASE4P34096 147 aaKnown RBP4.19□□□□□ -1.74
CDKN1B-204ENST00000477087 ASIPP42127 132 aa4.19□□□□□ -1.74
CDKN1B-204ENST00000477087 TFPI2P48307 235 aa4.19□□□□□ -1.74
CDKN1B-204ENST00000477087 TCL1AP56279 114 aa4.19□□□□□ -1.74
CDKN1B-204ENST00000477087 MRPL54Q6P161 138 aaKnown RBP4.19□□□□□ -1.74
CDKN1B-204ENST00000477087 SMIM15Q7Z3B0 74 aa4.19□□□□□ -1.74
CDKN1B-204ENST00000477087 KIR2DL5AQ8N109 375 aa4.19□□□□□ -1.74
CDKN1B-204ENST00000477087 KIR2DL5BQ8NHK3 375 aa4.19□□□□□ -1.74
CDKN1B-204ENST00000477087 C9orf85Q96MD7 179 aa4.19□□□□□ -1.74
CDKN1B-204ENST00000477087 ALKBH7Q9BT30 221 aaPredicted RBP4.19□□□□□ -1.74
CDKN1B-204ENST00000477087 SETXQ7Z333 2677 aaKnown RBP4.18□□□□□ -1.74
CDKN1B-204ENST00000477087 SETD2Q9BYW2 2564 aaPredicted RBP4.18□□□□□ -1.74
CDKN1B-204ENST00000477087 IGHV3-16A0A0C4DH30 117 aa4.18□□□□□ -1.74
CDKN1B-204ENST00000477087 LINC01546A6NGU7 62 aa4.18□□□□□ -1.74
CDKN1B-204ENST00000477087 K7EMI3 77 aa4.18□□□□□ -1.74
CDKN1B-204ENST00000477087 GZMBP10144 247 aa4.18□□□□□ -1.74
CDKN1B-204ENST00000477087 RAB4AP20338 218 aa4.18□□□□□ -1.74
CDKN1B-204ENST00000477087 PMCHP20382 165 aa4.18□□□□□ -1.74
CDKN1B-204ENST00000477087 CAMPP49913 170 aa4.18□□□□□ -1.74
CDKN1B-204ENST00000477087 SNRPEP62304 92 aaKnown RBP4.18□□□□□ -1.74
CDKN1B-204ENST00000477087 SLAQ13239 276 aa4.18□□□□□ -1.74
CDKN1B-204ENST00000477087 STHQ8IWL8 128 aa4.18□□□□□ -1.74
CDKN1B-204ENST00000477087 ZFP82Q8N141 532 aa4.18□□□□□ -1.74
CDKN1B-204ENST00000477087 CSNK1G2-AS1Q8NCQ2 148 aa4.18□□□□□ -1.74
CDKN1B-204ENST00000477087 SPXQ9BT56 116 aa4.18□□□□□ -1.74
CDKN1B-204ENST00000477087 EDA2RQ9HAV5 297 aa4.18□□□□□ -1.74
CDKN1B-204ENST00000477087 GSN-AS1Q9NRJ2 163 aa4.18□□□□□ -1.74
CDKN1B-204ENST00000477087 NAGKQ9UJ70 344 aa4.18□□□□□ -1.74
CDKN1B-204ENST00000477087 TRAV12-3A0A0B4J271 114 aa4.17□□□□□ -1.74
CDKN1B-204ENST00000477087 RBMY1BA6NDE4 496 aaKnown RBP4.17□□□□□ -1.74
CDKN1B-204ENST00000477087 RBMY1EA6NEQ0 496 aaKnown RBP4.17□□□□□ -1.74
CDKN1B-204ENST00000477087 SMIM9A6NGZ8 99 aa4.17□□□□□ -1.74
CDKN1B-204ENST00000477087 KNCNA6PVL3 124 aa4.17□□□□□ -1.74
CDKN1B-204ENST00000477087 M0R381 172 aa4.17□□□□□ -1.74
CDKN1B-204ENST00000477087 GNRH2O43555 120 aa4.17□□□□□ -1.74
CDKN1B-204ENST00000477087 SPINK4O60575 86 aa4.17□□□□□ -1.74
CDKN1B-204ENST00000477087 INSP01308 110 aa4.17□□□□□ -1.74
CDKN1B-204ENST00000477087 RBMY1DP0C7P1 496 aaKnown RBP4.17□□□□□ -1.74
CDKN1B-204ENST00000477087 S100A4P26447 101 aaKnown RBP4.17□□□□□ -1.74
CDKN1B-204ENST00000477087 NDUFA6P56556 154 aa4.17□□□□□ -1.74
CDKN1B-204ENST00000477087 DEFB1P60022 68 aa4.17□□□□□ -1.74
CDKN1B-204ENST00000477087 RAB4BP61018 213 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms