RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 MIAQ16674 131 aa7.2□□□□□ -1.26
BRCA1-213ENST00000476777 ZFP69Q49AA0 526 aa7.2□□□□□ -1.26
BRCA1-213ENST00000476777 MPV17L2Q567V2 206 aa7.2□□□□□ -1.26
BRCA1-213ENST00000476777 FAM74A4Q5TZK3 123 aa7.2□□□□□ -1.26
BRCA1-213ENST00000476777 C5orf17Q8NAS9 161 aa7.2□□□□□ -1.26
BRCA1-213ENST00000476777 IL36BQ9NZH7 164 aa7.2□□□□□ -1.26
BRCA1-213ENST00000476777 A0A087WWL8 130 aa7.19□□□□□ -1.26
BRCA1-213ENST00000476777 A0A087WYN8 130 aa7.19□□□□□ -1.26
BRCA1-213ENST00000476777 TRBV6-8A0A0A6YYG3 113 aa7.19□□□□□ -1.26
BRCA1-213ENST00000476777 TRBV10-1A0A0K0K1A3 114 aa7.19□□□□□ -1.26
BRCA1-213ENST00000476777 CCDC160A6NGH7 325 aa7.19□□□□□ -1.26
BRCA1-213ENST00000476777 K7EQM0 130 aa7.19□□□□□ -1.26
BRCA1-213ENST00000476777 SIX6O95475 246 aa7.19□□□□□ -1.26
BRCA1-213ENST00000476777 ANGP03950 147 aaKnown RBP7.19□□□□□ -1.26
BRCA1-213ENST00000476777 H2AFB2P0C5Z0 115 aa7.19□□□□□ -1.26
BRCA1-213ENST00000476777 FLI1Q01543 452 aaPredicted RBP7.19□□□□□ -1.26
BRCA1-213ENST00000476777 LRRC37A5PQ49AS3 106 aa7.19□□□□□ -1.26
BRCA1-213ENST00000476777 KRTAP26-1Q6PEX3 210 aa7.19□□□□□ -1.26
BRCA1-213ENST00000476777 PRNTQ86SH4 94 aa7.19□□□□□ -1.26
BRCA1-213ENST00000476777 TRBV7-3A0A075B6L6 115 aa7.18□□□□□ -1.26
BRCA1-213ENST00000476777 A0A1W2PPV4 95 aa7.18□□□□□ -1.26
BRCA1-213ENST00000476777 H3BVH4 76 aa7.18□□□□□ -1.26
BRCA1-213ENST00000476777 PHOX2AO14813 284 aa7.18□□□□□ -1.26
BRCA1-213ENST00000476777 HMGB3O15347 200 aaKnown RBP7.18□□□□□ -1.26
BRCA1-213ENST00000476777 CHTF8P0CG12 524 aa7.18□□□□□ -1.26
BRCA1-213ENST00000476777 RAB2AP61019 212 aa7.18□□□□□ -1.26
BRCA1-213ENST00000476777 CNBPP62633 177 aaKnown RBP7.18□□□□□ -1.26
BRCA1-213ENST00000476777 RPL36AP83881 106 aaKnown RBP7.18□□□□□ -1.26
BRCA1-213ENST00000476777 CLRN3Q8NCR9 226 aa7.18□□□□□ -1.26
BRCA1-213ENST00000476777 SCGB1C1Q8TD33 95 aa7.18□□□□□ -1.26
BRCA1-213ENST00000476777 RPL36ALQ969Q0 106 aaKnown RBP7.18□□□□□ -1.26
BRCA1-213ENST00000476777 DPH3Q96FX2 82 aa7.18□□□□□ -1.26
BRCA1-213ENST00000476777 RNF185Q96GF1 192 aa7.18□□□□□ -1.26
BRCA1-213ENST00000476777 LPAP08519 4548 aa7.17□□□□□ -1.26
BRCA1-213ENST00000476777 A0A0J9YXV3 536 aa7.17□□□□□ -1.26
BRCA1-213ENST00000476777 SCO2A0A1W2PP80 73 aa7.17□□□□□ -1.26
BRCA1-213ENST00000476777 A6NJY4 79 aa7.17□□□□□ -1.26
BRCA1-213ENST00000476777 ARL14EPLP0DKL9 152 aa7.17□□□□□ -1.26
BRCA1-213ENST00000476777 KRTAP10-8P60410 259 aa7.17□□□□□ -1.26
BRCA1-213ENST00000476777 SAPCD1Q5SSQ6 148 aa7.17□□□□□ -1.26
BRCA1-213ENST00000476777 OR10G8Q8NGN5 311 aa7.17□□□□□ -1.26
BRCA1-213ENST00000476777 SUN5Q8TC36 379 aa7.17□□□□□ -1.26
BRCA1-213ENST00000476777 SPACA4Q8TDM5 124 aa7.17□□□□□ -1.26
BRCA1-213ENST00000476777 SFRP2Q96HF1 295 aa7.17□□□□□ -1.26
BRCA1-213ENST00000476777 SMIM3Q9BZL3 60 aa7.17□□□□□ -1.26
BRCA1-213ENST00000476777 RBM38Q9H0Z9 239 aaKnown RBP7.17□□□□□ -1.26
BRCA1-213ENST00000476777 PRR34Q9NV39 138 aa7.17□□□□□ -1.26
BRCA1-213ENST00000476777 HSPB11Q9Y547 144 aa7.17□□□□□ -1.26
BRCA1-213ENST00000476777 FABP5P3A8MUU1 101 aa7.16□□□□□ -1.26
BRCA1-213ENST00000476777 ARMS2P0C7Q2 107 aa7.16□□□□□ -1.26
BRCA1-213ENST00000476777 DNLZQ5SXM8 178 aa7.16□□□□□ -1.26
BRCA1-213ENST00000476777 OR11H4Q8NGC9 324 aa7.16□□□□□ -1.26
BRCA1-213ENST00000476777 PLAC8Q9NZF1 115 aa7.16□□□□□ -1.26
BRCA1-213ENST00000476777 EPDR1Q9UM22 224 aa7.16□□□□□ -1.26
BRCA1-213ENST00000476777 KIF25-AS1Q9Y6Z4 181 aa7.16□□□□□ -1.26
BRCA1-213ENST00000476777 IGHV3-64A0A075B6Q5 118 aa7.15□□□□□ -1.26
BRCA1-213ENST00000476777 B4DEV8 164 aa7.15□□□□□ -1.26
BRCA1-213ENST00000476777 PTTG1O95997 202 aa7.15□□□□□ -1.26
BRCA1-213ENST00000476777 SLPIP03973 132 aa7.15□□□□□ -1.26
BRCA1-213ENST00000476777 SUMO1P63165 101 aaKnown RBP7.15□□□□□ -1.26
BRCA1-213ENST00000476777 WDR73Q6P4I2 378 aa7.15□□□□□ -1.26
BRCA1-213ENST00000476777 CLPSL2Q6UWE3 100 aa7.15□□□□□ -1.26
BRCA1-213ENST00000476777 C7orf33Q8WU49 177 aa7.15□□□□□ -1.26
BRCA1-213ENST00000476777 CHCHD5Q9BSY4 110 aa7.15□□□□□ -1.26
BRCA1-213ENST00000476777 WFDC1Q9HC57 220 aa7.15□□□□□ -1.26
BRCA1-213ENST00000476777 TRAV34A0A0B4J273 112 aa7.14□□□□□ -1.27
BRCA1-213ENST00000476777 hDV102S1A0JD36 115 aa7.14□□□□□ -1.27
BRCA1-213ENST00000476777 KRBOX1C9JBD0 128 aa7.14□□□□□ -1.27
BRCA1-213ENST00000476777 STAG3L2P0CL84 134 aa7.14□□□□□ -1.27
BRCA1-213ENST00000476777 STAG3L3P0CL85 134 aa7.14□□□□□ -1.27
BRCA1-213ENST00000476777 GCHFRP30047 84 aa7.14□□□□□ -1.27
BRCA1-213ENST00000476777 PKIAP61925 76 aa7.14□□□□□ -1.27
BRCA1-213ENST00000476777 PRR3P79522 188 aaKnown RBP7.14□□□□□ -1.27
BRCA1-213ENST00000476777 LINC00269Q8N2A0 174 aa7.14□□□□□ -1.27
BRCA1-213ENST00000476777 NEXN-AS1Q8NBZ9 246 aa7.14□□□□□ -1.27
BRCA1-213ENST00000476777 PHLDA3Q9Y5J5 127 aa7.14□□□□□ -1.27
BRCA1-213ENST00000476777 ARL2-SNX15V9GYD0 113 aa7.14□□□□□ -1.27
BRCA1-213ENST00000476777 GRIFINA4D1Z8 144 aa7.13□□□□□ -1.27
BRCA1-213ENST00000476777 M0R036 132 aa7.13□□□□□ -1.27
BRCA1-213ENST00000476777 M0R381 172 aa7.13□□□□□ -1.27
BRCA1-213ENST00000476777 CDC34P49427 236 aaPredicted RBP7.13□□□□□ -1.27
BRCA1-213ENST00000476777 CRIP1P50238 77 aa7.13□□□□□ -1.27
BRCA1-213ENST00000476777 RBX1P62877 108 aa7.13□□□□□ -1.27
BRCA1-213ENST00000476777 CYCSP99999 105 aaKnown RBP7.13□□□□□ -1.27
BRCA1-213ENST00000476777 PPP1R1CQ8WVI7 109 aa7.13□□□□□ -1.27
BRCA1-213ENST00000476777 MUC2Q02817 5179 aa7.13□□□□□ -1.27
BRCA1-213ENST00000476777 FAM240BA0A1B0GVZ2 78 aa7.12□□□□□ -1.27
BRCA1-213ENST00000476777 RPL12P30050 165 aaKnown RBP7.12□□□□□ -1.27
BRCA1-213ENST00000476777 H2BFSP57053 126 aa7.12□□□□□ -1.27
BRCA1-213ENST00000476777 PRR27Q6MZM9 219 aa7.12□□□□□ -1.27
BRCA1-213ENST00000476777 NTM-AS1Q6ZSK4 140 aa7.12□□□□□ -1.27
BRCA1-213ENST00000476777 GTSF1Q8WW33 167 aa7.12□□□□□ -1.27
BRCA1-213ENST00000476777 RAB24Q969Q5 203 aa7.12□□□□□ -1.27
BRCA1-213ENST00000476777 IGLV10-54A0A075B6I4 117 aa7.11□□□□□ -1.27
BRCA1-213ENST00000476777 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.11□□□□□ -1.27
BRCA1-213ENST00000476777 MPC2O95563 127 aa7.11□□□□□ -1.27
BRCA1-213ENST00000476777 TPT1P13693 172 aaKnown RBP7.11□□□□□ -1.27
BRCA1-213ENST00000476777 RAB4BP61018 213 aa7.11□□□□□ -1.27
BRCA1-213ENST00000476777 ZFP82Q8N141 532 aa7.11□□□□□ -1.27
BRCA1-213ENST00000476777 AP5S1Q9NUS5 200 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms