RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 HERC1Q15751 4861 aa7.22□□□□□ -1.25
SEC13-214ENST00000476597 TMSB15BA0A087X1C1 80 aa7.22□□□□□ -1.25
SEC13-214ENST00000476597 PSCAO43653 123 aa7.22□□□□□ -1.25
SEC13-214ENST00000476597 S100A9P06702 114 aaKnown RBP7.22□□□□□ -1.25
SEC13-214ENST00000476597 FAM213BQ8TBF2 198 aa7.22□□□□□ -1.25
SEC13-214ENST00000476597 ZNF471Q9BX82 626 aaPredicted RBP7.22□□□□□ -1.25
SEC13-214ENST00000476597 PHLDA3Q9Y5J5 127 aa7.22□□□□□ -1.25
SEC13-214ENST00000476597 KANTRA0A1W2PQU2 76 aa7.21□□□□□ -1.26
SEC13-214ENST00000476597 RHODO00212 210 aa7.21□□□□□ -1.26
SEC13-214ENST00000476597 BCL2L11O43521 198 aa7.21□□□□□ -1.26
SEC13-214ENST00000476597 TPT1P13693 172 aaKnown RBP7.21□□□□□ -1.26
SEC13-214ENST00000476597 GCSHP23434 173 aa7.21□□□□□ -1.26
SEC13-214ENST00000476597 LAGE3Q14657 143 aa7.21□□□□□ -1.26
SEC13-214ENST00000476597 MLST8Q9BVC4 326 aa7.21□□□□□ -1.26
SEC13-214ENST00000476597 A0A087WWC5 75 aa7.2□□□□□ -1.26
SEC13-214ENST00000476597 A0A1B0GV50 99 aa7.2□□□□□ -1.26
SEC13-214ENST00000476597 H2AFB1P0C5Y9 115 aa7.2□□□□□ -1.26
SEC13-214ENST00000476597 EIF5AP63241 154 aaKnown RBP7.2□□□□□ -1.26
SEC13-214ENST00000476597 ZFP82Q8N141 532 aa7.2□□□□□ -1.26
SEC13-214ENST00000476597 Q8N3U1 123 aa7.2□□□□□ -1.26
SEC13-214ENST00000476597 Q9HAA7 133 aa7.2□□□□□ -1.26
SEC13-214ENST00000476597 A0A087WWL8 130 aa7.19□□□□□ -1.26
SEC13-214ENST00000476597 SCO2A0A1W2PP80 73 aa7.19□□□□□ -1.26
SEC13-214ENST00000476597 M0R381 172 aa7.19□□□□□ -1.26
SEC13-214ENST00000476597 FAM74A4Q5TZK3 123 aa7.19□□□□□ -1.26
SEC13-214ENST00000476597 TMUB2Q71RG4 321 aa7.19□□□□□ -1.26
SEC13-214ENST00000476597 BAGE2Q86Y30 109 aa7.19□□□□□ -1.26
SEC13-214ENST00000476597 NTN5Q8WTR8 489 aaPredicted RBP7.19□□□□□ -1.26
SEC13-214ENST00000476597 TM2D2Q9BX73 214 aa7.19□□□□□ -1.26
SEC13-214ENST00000476597 MYCBP2O75592 4640 aa7.18□□□□□ -1.26
SEC13-214ENST00000476597 IGLV5-52A0A0A0MRZ9 124 aa7.18□□□□□ -1.26
SEC13-214ENST00000476597 TRAV8-3A0A0A6YYJ7 113 aa7.18□□□□□ -1.26
SEC13-214ENST00000476597 TRBV10-1A0A0K0K1A3 114 aa7.18□□□□□ -1.26
SEC13-214ENST00000476597 EPM2AB3EWF7 344 aa7.18□□□□□ -1.26
SEC13-214ENST00000476597 PFDN1O60925 122 aa7.18□□□□□ -1.26
SEC13-214ENST00000476597 CXCL1P09341 107 aa7.18□□□□□ -1.26
SEC13-214ENST00000476597 CCL20P78556 96 aa7.18□□□□□ -1.26
SEC13-214ENST00000476597 DAZ4Q86SG3 579 aaKnown RBP7.18□□□□□ -1.26
SEC13-214ENST00000476597 Q8N814 137 aa7.18□□□□□ -1.26
SEC13-214ENST00000476597 SSBP4Q9BWG4 385 aaPredicted RBP7.18□□□□□ -1.26
SEC13-214ENST00000476597 DAZ3Q9NR90 486 aaKnown RBP7.18□□□□□ -1.26
SEC13-214ENST00000476597 TRAV1-1A0A0B4J248 108 aa7.17□□□□□ -1.26
SEC13-214ENST00000476597 SNAI2O43623 268 aa7.17□□□□□ -1.26
SEC13-214ENST00000476597 RPL19P84098 196 aaKnown RBP7.17□□□□□ -1.26
SEC13-214ENST00000476597 TOR2AQ5JU69 321 aa7.17□□□□□ -1.26
SEC13-214ENST00000476597 NIT1Q86X76 327 aa7.17□□□□□ -1.26
SEC13-214ENST00000476597 OR10G8Q8NGN5 311 aa7.17□□□□□ -1.26
SEC13-214ENST00000476597 OR10AG1Q8NH19 301 aa7.17□□□□□ -1.26
SEC13-214ENST00000476597 TRBV7-3A0A075B6L6 115 aa7.16□□□□□ -1.26
SEC13-214ENST00000476597 OR5AL1P0C617 328 aa7.16□□□□□ -1.26
SEC13-214ENST00000476597 RPL35P42766 123 aaKnown RBP7.16□□□□□ -1.26
SEC13-214ENST00000476597 UBE2D3P61077 147 aa7.16□□□□□ -1.26
SEC13-214ENST00000476597 UBE2D2P62837 147 aa7.16□□□□□ -1.26
SEC13-214ENST00000476597 RPL36AP83881 106 aaKnown RBP7.16□□□□□ -1.26
SEC13-214ENST00000476597 PRR27Q6MZM9 219 aa7.16□□□□□ -1.26
SEC13-214ENST00000476597 RPL36ALQ969Q0 106 aaKnown RBP7.16□□□□□ -1.26
SEC13-214ENST00000476597 MANBALQ9NQG1 85 aa7.16□□□□□ -1.26
SEC13-214ENST00000476597 RAB5CP51148 216 aa7.15□□□□□ -1.26
SEC13-214ENST00000476597 RAB4BP61018 213 aa7.15□□□□□ -1.26
SEC13-214ENST00000476597 WFDC2Q14508 124 aa7.15□□□□□ -1.26
SEC13-214ENST00000476597 C11orf52Q96A22 123 aa7.15□□□□□ -1.26
SEC13-214ENST00000476597 TMEM70Q9BUB7 260 aa7.15□□□□□ -1.26
SEC13-214ENST00000476597 GNG13Q9P2W3 67 aa7.15□□□□□ -1.26
SEC13-214ENST00000476597 COX11Q9Y6N1 276 aa7.15□□□□□ -1.26
SEC13-214ENST00000476597 SPANXN1Q5VSR9 72 aa7.14□□□□□ -1.27
SEC13-214ENST00000476597 EIF5AL1Q6IS14 154 aaKnown RBP7.14□□□□□ -1.27
SEC13-214ENST00000476597 NEXN-AS1Q8NBZ9 246 aa7.14□□□□□ -1.27
SEC13-214ENST00000476597 CHCHD7Q9BUK0 85 aa7.14□□□□□ -1.27
SEC13-214ENST00000476597 DERL1Q9BUN8 251 aa7.14□□□□□ -1.27
SEC13-214ENST00000476597 URGCP-MRPS24S4R325 110 aa7.14□□□□□ -1.27
SEC13-214ENST00000476597 A0A087WX48 190 aa7.13□□□□□ -1.27
SEC13-214ENST00000476597 TRBV6-8A0A0A6YYG3 113 aa7.13□□□□□ -1.27
SEC13-214ENST00000476597 MUC21A0A0G2JKD1 596 aa7.13□□□□□ -1.27
SEC13-214ENST00000476597 MUC21A0A140T8X8 626 aa7.13□□□□□ -1.27
SEC13-214ENST00000476597 IGLV2-8P01709 118 aa7.13□□□□□ -1.27
SEC13-214ENST00000476597 C1QBP02746 253 aa7.13□□□□□ -1.27
SEC13-214ENST00000476597 SMR3BP02814 79 aaPredicted RBP7.13□□□□□ -1.27
SEC13-214ENST00000476597 INAFM2P0DMQ5 153 aa7.13□□□□□ -1.27
SEC13-214ENST00000476597 SULT1A2P50226 295 aa7.13□□□□□ -1.27
SEC13-214ENST00000476597 Q5VSD8 79 aa7.13□□□□□ -1.27
SEC13-214ENST00000476597 TCTE3Q8IZS6 198 aa7.13□□□□□ -1.27
SEC13-214ENST00000476597 BAALCQ8WXS3 180 aa7.13□□□□□ -1.27
SEC13-214ENST00000476597 FRZBQ92765 325 aa7.13□□□□□ -1.27
SEC13-214ENST00000476597 RMI2Q96E14 147 aa7.13□□□□□ -1.27
SEC13-214ENST00000476597 DNAJC30Q96LL9 226 aa7.13□□□□□ -1.27
SEC13-214ENST00000476597 FAM30AQ9NZY2 134 aa7.13□□□□□ -1.27
SEC13-214ENST00000476597 KLK12Q9UKR0 248 aa7.13□□□□□ -1.27
SEC13-214ENST00000476597 KIF25-AS1Q9Y6Z4 181 aa7.13□□□□□ -1.27
SEC13-214ENST00000476597 TEX46H3BTG2 121 aa7.12□□□□□ -1.27
SEC13-214ENST00000476597 LECT2O14960 151 aa7.12□□□□□ -1.27
SEC13-214ENST00000476597 ELOBQ15370 118 aa7.12□□□□□ -1.27
SEC13-214ENST00000476597 ZNF56Q15929 161 aa7.12□□□□□ -1.27
SEC13-214ENST00000476597 DMBT1Q9UGM3 2413 aaPredicted RBP7.12□□□□□ -1.27
SEC13-214ENST00000476597 IGKV2D-24A0A075B6R9 120 aa7.11□□□□□ -1.27
SEC13-214ENST00000476597 RAB19A4D1S5 217 aa7.11□□□□□ -1.27
SEC13-214ENST00000476597 C19orf71A6NCJ1 209 aa7.11□□□□□ -1.27
SEC13-214ENST00000476597 TMEM262E9PQX1 116 aa7.11□□□□□ -1.27
SEC13-214ENST00000476597 F5H697 171 aa7.11□□□□□ -1.27
SEC13-214ENST00000476597 IGLC6P0CF74 106 aa7.11□□□□□ -1.27
SEC13-214ENST00000476597 SSTP61278 116 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms