RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 KRTAP10-2P60368 255 aa11.01□□□□□ -0.65
COL1A1-205ENST00000476387 OR10J3Q5JRS4 329 aa11.01□□□□□ -0.65
COL1A1-205ENST00000476387 MAPKAPK5-AS1Q8N8E1 139 aa11.01□□□□□ -0.65
COL1A1-205ENST00000476387 SAMD10Q9BYL1 202 aa11.01□□□□□ -0.65
COL1A1-205ENST00000476387 VAX2Q9UIW0 290 aa11.01□□□□□ -0.65
COL1A1-205ENST00000476387 BOLA1Q9Y3E2 137 aa11.01□□□□□ -0.65
COL1A1-205ENST00000476387 A0A087WWL8 130 aa11□□□□□ -0.65
COL1A1-205ENST00000476387 DNAH10OSP0CZ25 163 aa11□□□□□ -0.65
COL1A1-205ENST00000476387 UFSP1Q6NVU6 142 aa11□□□□□ -0.65
COL1A1-205ENST00000476387 ALKAL2Q6UX46 152 aa11□□□□□ -0.65
COL1A1-205ENST00000476387 ATP6V0E2Q8NHE4 81 aa11□□□□□ -0.65
COL1A1-205ENST00000476387 SFRP2Q96HF1 295 aa11□□□□□ -0.65
COL1A1-205ENST00000476387 MED9Q9NWA0 146 aa11□□□□□ -0.65
COL1A1-205ENST00000476387 GAGE12JA6NER3 117 aa10.99□□□□□ -0.65
COL1A1-205ENST00000476387 GAGE1Q13065 139 aa10.99□□□□□ -0.65
COL1A1-205ENST00000476387 GAGE4Q13068 117 aa10.99□□□□□ -0.65
COL1A1-205ENST00000476387 GAGE5Q13069 117 aa10.99□□□□□ -0.65
COL1A1-205ENST00000476387 GAGE13Q4V321 117 aa10.99□□□□□ -0.65
COL1A1-205ENST00000476387 Q6ZSN1 163 aa10.99□□□□□ -0.65
COL1A1-205ENST00000476387 NFE4Q86UQ8 179 aa10.99□□□□□ -0.65
COL1A1-205ENST00000476387 C10orf126Q8N4M7 172 aa10.99□□□□□ -0.65
COL1A1-205ENST00000476387 DAZAP1Q96EP5 407 aaKnown RBP10.99□□□□□ -0.65
COL1A1-205ENST00000476387 SMIM12Q96EX1 92 aa10.99□□□□□ -0.65
COL1A1-205ENST00000476387 GTSF1LQ9H1H1 148 aa10.99□□□□□ -0.65
COL1A1-205ENST00000476387 IGHV3-38A0A0C4DH36 116 aa10.98□□□□□ -0.65
COL1A1-205ENST00000476387 CRYGDP07320 174 aa10.98□□□□□ -0.65
COL1A1-205ENST00000476387 BLOC1S1P78537 153 aa10.98□□□□□ -0.65
COL1A1-205ENST00000476387 LELP1Q5T871 98 aa10.98□□□□□ -0.65
COL1A1-205ENST00000476387 C14orf178Q8N769 122 aaPredicted RBP10.98□□□□□ -0.65
COL1A1-205ENST00000476387 DNAH5Q8TE73 4624 aa10.97□□□□□ -0.65
COL1A1-205ENST00000476387 RAB19A4D1S5 217 aa10.97□□□□□ -0.65
COL1A1-205ENST00000476387 EREGO14944 169 aa10.97□□□□□ -0.65
COL1A1-205ENST00000476387 OR5AL1P0C617 328 aa10.97□□□□□ -0.65
COL1A1-205ENST00000476387 ERVFC1-1P60608 527 aa10.97□□□□□ -0.65
COL1A1-205ENST00000476387 SPANXN1Q5VSR9 72 aa10.97□□□□□ -0.65
COL1A1-205ENST00000476387 Q8N1X5 172 aa10.97□□□□□ -0.65
COL1A1-205ENST00000476387 OR10AG1Q8NH19 301 aa10.97□□□□□ -0.65
COL1A1-205ENST00000476387 BIN3Q9NQY0 253 aa10.97□□□□□ -0.65
COL1A1-205ENST00000476387 PGPEP1Q9NXJ5 209 aa10.97□□□□□ -0.65
COL1A1-205ENST00000476387 MSRB1Q9NZV6 116 aa10.97□□□□□ -0.65
COL1A1-205ENST00000476387 A0A1B0GVG6 124 aa10.96□□□□□ -0.65
COL1A1-205ENST00000476387 SNAI2O43623 268 aa10.96□□□□□ -0.65
COL1A1-205ENST00000476387 IGLV2-8P01709 118 aa10.96□□□□□ -0.65
COL1A1-205ENST00000476387 LINC00694P0DN24 101 aa10.96□□□□□ -0.65
COL1A1-205ENST00000476387 NKX2-5P52952 324 aaPredicted RBP10.96□□□□□ -0.65
COL1A1-205ENST00000476387 LINC01556Q5JQF7 62 aa10.96□□□□□ -0.65
COL1A1-205ENST00000476387 CDPF1Q6NVV7 123 aa10.96□□□□□ -0.65
COL1A1-205ENST00000476387 APOBP04114 4563 aaKnown RBP10.96□□□□□ -0.66
COL1A1-205ENST00000476387 XKRY2A2RUG3 117 aa10.95□□□□□ -0.66
COL1A1-205ENST00000476387 RPS20P60866 119 aaKnown RBP10.95□□□□□ -0.66
COL1A1-205ENST00000476387 ZNF56Q15929 161 aa10.95□□□□□ -0.66
COL1A1-205ENST00000476387 OR2D3Q8NGH3 330 aa10.95□□□□□ -0.66
COL1A1-205ENST00000476387 MUC21A0A0G2JKD1 596 aa10.94□□□□□ -0.66
COL1A1-205ENST00000476387 TRBV10-1A0A0K0K1A3 114 aa10.94□□□□□ -0.66
COL1A1-205ENST00000476387 MUC21A0A140T8X8 626 aa10.94□□□□□ -0.66
COL1A1-205ENST00000476387 P01737 135 aa10.94□□□□□ -0.66
COL1A1-205ENST00000476387 TPPP3Q9BW30 176 aa10.94□□□□□ -0.66
COL1A1-205ENST00000476387 SSBP4Q9BWG4 385 aaPredicted RBP10.94□□□□□ -0.66
COL1A1-205ENST00000476387 TNFRSF18Q9Y5U5 241 aa10.94□□□□□ -0.66
COL1A1-205ENST00000476387 TRBV20OR9-2A0A075B6H5 130 aa10.93□□□□□ -0.66
COL1A1-205ENST00000476387 A0A087WWC5 75 aa10.93□□□□□ -0.66
COL1A1-205ENST00000476387 C19orf71A6NCJ1 209 aa10.93□□□□□ -0.66
COL1A1-205ENST00000476387 SMIM17P0DL12 118 aa10.93□□□□□ -0.66
COL1A1-205ENST00000476387 RAB4BP61018 213 aa10.93□□□□□ -0.66
COL1A1-205ENST00000476387 SSTP61278 116 aa10.93□□□□□ -0.66
COL1A1-205ENST00000476387 RPL36AP83881 106 aaKnown RBP10.93□□□□□ -0.66
COL1A1-205ENST00000476387 FER1L6-AS1Q8NA97 138 aa10.93□□□□□ -0.66
COL1A1-205ENST00000476387 RPL36ALQ969Q0 106 aaKnown RBP10.93□□□□□ -0.66
COL1A1-205ENST00000476387 AP1S3Q96PC3 154 aa10.93□□□□□ -0.66
COL1A1-205ENST00000476387 Q9UF83 564 aa10.93□□□□□ -0.66
COL1A1-205ENST00000476387 RBFOX3A6NFN3 312 aa10.92□□□□□ -0.66
COL1A1-205ENST00000476387 IGHV3-30P01768 117 aa10.92□□□□□ -0.66
COL1A1-205ENST00000476387 IGHV3-33P01772 117 aa10.92□□□□□ -0.66
COL1A1-205ENST00000476387 IGHV3-30-3P0DP02 117 aa10.92□□□□□ -0.66
COL1A1-205ENST00000476387 IGHV3-30-5P0DP03 117 aa10.92□□□□□ -0.66
COL1A1-205ENST00000476387 GZMBP10144 247 aa10.92□□□□□ -0.66
COL1A1-205ENST00000476387 A0A087WTM6 91 aa10.91□□□□□ -0.66
COL1A1-205ENST00000476387 F5H697 171 aa10.91□□□□□ -0.66
COL1A1-205ENST00000476387 TRBV7-3A0A075B6L6 115 aa10.9□□□□□ -0.66
COL1A1-205ENST00000476387 TMEM250H0YL14 139 aa10.9□□□□□ -0.66
COL1A1-205ENST00000476387 IGLC6P0CF74 106 aa10.9□□□□□ -0.66
COL1A1-205ENST00000476387 CACNG7P62955 275 aa10.9□□□□□ -0.66
COL1A1-205ENST00000476387 LYPD6BQ8NI32 183 aa10.9□□□□□ -0.66
COL1A1-205ENST00000476387 Q9HAA7 133 aa10.9□□□□□ -0.66
COL1A1-205ENST00000476387 IBA57-AS1B1ANH7 110 aa10.89□□□□□ -0.67
COL1A1-205ENST00000476387 PSCAO43653 123 aa10.89□□□□□ -0.67
COL1A1-205ENST00000476387 TOR2AQ5JU69 321 aa10.89□□□□□ -0.67
COL1A1-205ENST00000476387 URGCP-MRPS24S4R325 110 aa10.89□□□□□ -0.67
COL1A1-205ENST00000476387 F2Z2F3 143 aa10.88□□□□□ -0.67
COL1A1-205ENST00000476387 CEBPGP53567 150 aa10.88□□□□□ -0.67
COL1A1-205ENST00000476387 UBE2D3P61077 147 aa10.88□□□□□ -0.67
COL1A1-205ENST00000476387 UBE2D2P62837 147 aa10.88□□□□□ -0.67
COL1A1-205ENST00000476387 LAGE3Q14657 143 aa10.88□□□□□ -0.67
COL1A1-205ENST00000476387 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.88□□□□□ -0.67
COL1A1-205ENST00000476387 OR10G8Q8NGN5 311 aa10.88□□□□□ -0.67
COL1A1-205ENST00000476387 EIF5A2Q9GZV4 153 aaKnown RBP10.88□□□□□ -0.67
COL1A1-205ENST00000476387 MGPP08493 103 aa10.87□□□□□ -0.67
COL1A1-205ENST00000476387 NEXN-AS1Q8NBZ9 246 aa10.87□□□□□ -0.67
COL1A1-205ENST00000476387 NUDT10Q8NFP7 164 aa10.87□□□□□ -0.67
COL1A1-205ENST00000476387 OCC1Q8TAD7 63 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms