RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 SFRP2Q96HF1 295 aa8.57□□□□□ -1.04
MRPL55-228ENST00000476267 CTXND1A0A1B0GTU2 59 aa8.56□□□□□ -1.04
MRPL55-228ENST00000476267 FAM74A7A6NL05 159 aa8.56□□□□□ -1.04
MRPL55-228ENST00000476267 RPL7L1Q6DKI1 246 aaKnown RBP8.56□□□□□ -1.04
MRPL55-228ENST00000476267 Q8N976 141 aa8.56□□□□□ -1.04
MRPL55-228ENST00000476267 CHCHD7Q9BUK0 85 aa8.56□□□□□ -1.04
MRPL55-228ENST00000476267 CHAC1Q9BUX1 264 aa8.56□□□□□ -1.04
MRPL55-228ENST00000476267 UBR4Q5T4S7 5183 aa8.56□□□□□ -1.04
MRPL55-228ENST00000476267 M0R036 132 aa8.55□□□□□ -1.04
MRPL55-228ENST00000476267 SH2D1AO60880 128 aa8.55□□□□□ -1.04
MRPL55-228ENST00000476267 UBE2G2P60604 165 aa8.55□□□□□ -1.04
MRPL55-228ENST00000476267 ZNF674Q2M3X9 581 aa8.55□□□□□ -1.04
MRPL55-228ENST00000476267 LINC01559Q495D7 138 aa8.55□□□□□ -1.04
MRPL55-228ENST00000476267 OR11H4Q8NGC9 324 aa8.55□□□□□ -1.04
MRPL55-228ENST00000476267 CIRBP-AS1Q8TBR5 109 aa8.55□□□□□ -1.04
MRPL55-228ENST00000476267 HIST1H2BAQ96A08 127 aa8.55□□□□□ -1.04
MRPL55-228ENST00000476267 RMI2Q96E14 147 aa8.55□□□□□ -1.04
MRPL55-228ENST00000476267 KLK12Q9UKR0 248 aa8.55□□□□□ -1.04
MRPL55-228ENST00000476267 IGKV2D-24A0A075B6R9 120 aa8.54□□□□□ -1.04
MRPL55-228ENST00000476267 A0A087WWL8 130 aa8.54□□□□□ -1.04
MRPL55-228ENST00000476267 TRBV10-1A0A0K0K1A3 114 aa8.54□□□□□ -1.04
MRPL55-228ENST00000476267 TRBV6-1A0A0K0K1D8 114 aa8.54□□□□□ -1.04
MRPL55-228ENST00000476267 GRIFINA4D1Z8 144 aa8.54□□□□□ -1.04
MRPL55-228ENST00000476267 IFNA7P01567 189 aa8.54□□□□□ -1.04
MRPL55-228ENST00000476267 UBE2D3P61077 147 aa8.54□□□□□ -1.04
MRPL55-228ENST00000476267 UBE2D2P62837 147 aa8.54□□□□□ -1.04
MRPL55-228ENST00000476267 FAM74A4Q5TZK3 123 aa8.54□□□□□ -1.04
MRPL55-228ENST00000476267 SYT8Q8NBV8 401 aa8.54□□□□□ -1.04
MRPL55-228ENST00000476267 NKX6-2Q9C056 277 aaPredicted RBP8.54□□□□□ -1.04
MRPL55-228ENST00000476267 ZFP30Q9Y2G7 519 aa8.54□□□□□ -1.04
MRPL55-228ENST00000476267 RBFOX3A6NFN3 312 aa8.53□□□□□ -1.04
MRPL55-228ENST00000476267 LTAP01374 205 aa8.53□□□□□ -1.04
MRPL55-228ENST00000476267 SEC11BP0C7V7 166 aa8.53□□□□□ -1.04
MRPL55-228ENST00000476267 FAM162BQ5T6X4 162 aa8.53□□□□□ -1.04
MRPL55-228ENST00000476267 OR10G8Q8NGN5 311 aa8.53□□□□□ -1.04
MRPL55-228ENST00000476267 URGCP-MRPS24S4R325 110 aa8.53□□□□□ -1.04
MRPL55-228ENST00000476267 G3V3Q6 166 aa8.52□□□□□ -1.05
MRPL55-228ENST00000476267 PTTG1O95997 202 aa8.52□□□□□ -1.05
MRPL55-228ENST00000476267 GIPP09681 153 aaPredicted RBP8.52□□□□□ -1.05
MRPL55-228ENST00000476267 ENHOQ6UWT2 76 aa8.52□□□□□ -1.05
MRPL55-228ENST00000476267 UBE2WQ96B02 151 aa8.52□□□□□ -1.05
MRPL55-228ENST00000476267 FMC1Q96HJ9 113 aa8.52□□□□□ -1.05
MRPL55-228ENST00000476267 MED28Q9H204 178 aa8.52□□□□□ -1.05
MRPL55-228ENST00000476267 PHLDA3Q9Y5J5 127 aa8.52□□□□□ -1.05
MRPL55-228ENST00000476267 TRBV7-3A0A075B6L6 115 aa8.51□□□□□ -1.05
MRPL55-228ENST00000476267 M0R381 172 aa8.51□□□□□ -1.05
MRPL55-228ENST00000476267 IGLV2-8P01709 118 aa8.51□□□□□ -1.05
MRPL55-228ENST00000476267 ELOBQ15370 118 aa8.51□□□□□ -1.05
MRPL55-228ENST00000476267 PRR27Q6MZM9 219 aa8.51□□□□□ -1.05
MRPL55-228ENST00000476267 ZFP82Q8N141 532 aa8.51□□□□□ -1.05
MRPL55-228ENST00000476267 A0A087WX48 190 aa8.5□□□□□ -1.05
MRPL55-228ENST00000476267 TMSB15BA0A087X1C1 80 aa8.5□□□□□ -1.05
MRPL55-228ENST00000476267 TRBV6-8A0A0A6YYG3 113 aa8.5□□□□□ -1.05
MRPL55-228ENST00000476267 BORCS7-ASMTA0A0B4J1R7 106 aa8.5□□□□□ -1.05
MRPL55-228ENST00000476267 MAP1LC3B2A6NCE7 125 aa8.5□□□□□ -1.05
MRPL55-228ENST00000476267 OXTP01178 125 aa8.5□□□□□ -1.05
MRPL55-228ENST00000476267 TPT1P13693 172 aaKnown RBP8.5□□□□□ -1.05
MRPL55-228ENST00000476267 FHITP49789 147 aa8.5□□□□□ -1.05
MRPL55-228ENST00000476267 RPL36AP83881 106 aaKnown RBP8.5□□□□□ -1.05
MRPL55-228ENST00000476267 Q0VG73 95 aa8.5□□□□□ -1.05
MRPL55-228ENST00000476267 INO80EQ8NBZ0 244 aaPredicted RBP8.5□□□□□ -1.05
MRPL55-228ENST00000476267 RPL36ALQ969Q0 106 aaKnown RBP8.5□□□□□ -1.05
MRPL55-228ENST00000476267 TCEAL7Q9BRU2 100 aa8.5□□□□□ -1.05
MRPL55-228ENST00000476267 MAP1LC3BQ9GZQ8 125 aa8.5□□□□□ -1.05
MRPL55-228ENST00000476267 CYTL1Q9NRR1 136 aa8.5□□□□□ -1.05
MRPL55-228ENST00000476267 UBE2G1P62253 170 aa8.49□□□□□ -1.05
MRPL55-228ENST00000476267 MPV17L2Q567V2 206 aa8.49□□□□□ -1.05
MRPL55-228ENST00000476267 NEXN-AS1Q8NBZ9 246 aa8.49□□□□□ -1.05
MRPL55-228ENST00000476267 FXYD6-FXYD2A0A087WZ82 144 aa8.48□□□□□ -1.05
MRPL55-228ENST00000476267 CXCL1P09341 107 aa8.48□□□□□ -1.05
MRPL55-228ENST00000476267 RAB4BP61018 213 aa8.48□□□□□ -1.05
MRPL55-228ENST00000476267 AKR1C8PQ5T2L2 129 aa8.48□□□□□ -1.05
MRPL55-228ENST00000476267 SERTAD4-AS1Q5TG53 156 aa8.48□□□□□ -1.05
MRPL55-228ENST00000476267 MLST8Q9BVC4 326 aa8.48□□□□□ -1.05
MRPL55-228ENST00000476267 C1orf43Q9BWL3 253 aa8.48□□□□□ -1.05
MRPL55-228ENST00000476267 SNAI2O43623 268 aa8.47□□□□□ -1.05
MRPL55-228ENST00000476267 HNRNPA3P51991 378 aaKnown RBP8.47□□□□□ -1.05
MRPL55-228ENST00000476267 C14orf177Q52M58 125 aa8.47□□□□□ -1.05
MRPL55-228ENST00000476267 KRTAP26-1Q6PEX3 210 aa8.47□□□□□ -1.05
MRPL55-228ENST00000476267 NTM-AS1Q6ZSK4 140 aa8.47□□□□□ -1.05
MRPL55-228ENST00000476267 OR10AG1Q8NH19 301 aa8.47□□□□□ -1.05
MRPL55-228ENST00000476267 SSBP4Q9BWG4 385 aaPredicted RBP8.47□□□□□ -1.05
MRPL55-228ENST00000476267 RPL19P84098 196 aaKnown RBP8.46□□□□□ -1.06
MRPL55-228ENST00000476267 C15orf54Q8N8G6 183 aa8.46□□□□□ -1.06
MRPL55-228ENST00000476267 PRR34Q9NV39 138 aa8.46□□□□□ -1.06
MRPL55-228ENST00000476267 VAX2Q9UIW0 290 aa8.46□□□□□ -1.06
MRPL55-228ENST00000476267 KIF25-AS1Q9Y6Z4 181 aa8.46□□□□□ -1.06
MRPL55-228ENST00000476267 USP17L23D6RBM5 183 aa8.45□□□□□ -1.06
MRPL55-228ENST00000476267 PRSS1P07477 247 aa8.45□□□□□ -1.06
MRPL55-228ENST00000476267 AKR1C3P42330 323 aa8.45□□□□□ -1.06
MRPL55-228ENST00000476267 KCNIP4Q6PIL6 250 aa8.45□□□□□ -1.06
MRPL55-228ENST00000476267 DAZAP1Q96EP5 407 aaKnown RBP8.45□□□□□ -1.06
MRPL55-228ENST00000476267 TMEM262E9PQX1 116 aa8.44□□□□□ -1.06
MRPL55-228ENST00000476267 PAGE4O60829 102 aa8.44□□□□□ -1.06
MRPL55-228ENST00000476267 CRPP02741 224 aa8.44□□□□□ -1.06
MRPL55-228ENST00000476267 OR5AL1P0C617 328 aa8.44□□□□□ -1.06
MRPL55-228ENST00000476267 ZNF56Q15929 161 aa8.44□□□□□ -1.06
MRPL55-228ENST00000476267 MIAQ16674 131 aa8.44□□□□□ -1.06
MRPL55-228ENST00000476267 CST9LP1Q5W188 147 aa8.44□□□□□ -1.06
MRPL55-228ENST00000476267 C9orf163Q8N9P6 203 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms