RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 F8VRH5 84 aa5.16□□□□□ -1.58
UBR4-212ENST00000475973 F8W1H4 67 aa5.16□□□□□ -1.58
UBR4-212ENST00000475973 H7C1H1 209 aa5.16□□□□□ -1.58
UBR4-212ENST00000475973 ATP6V0E1O15342 81 aa5.16□□□□□ -1.58
UBR4-212ENST00000475973 CIDEAO60543 219 aa5.16□□□□□ -1.58
UBR4-212ENST00000475973 IGF1P05019 195 aa5.16□□□□□ -1.58
UBR4-212ENST00000475973 FABP2P12104 132 aa5.16□□□□□ -1.58
UBR4-212ENST00000475973 PLNP26678 52 aa5.16□□□□□ -1.58
UBR4-212ENST00000475973 FXYD7P58549 80 aa5.16□□□□□ -1.58
UBR4-212ENST00000475973 PRR9Q5T870 116 aa5.16□□□□□ -1.58
UBR4-212ENST00000475973 ZC2HC1BQ5TFG8 222 aa5.16□□□□□ -1.58
UBR4-212ENST00000475973 LCNL1Q6ZST4 164 aa5.16□□□□□ -1.58
UBR4-212ENST00000475973 FAM223AQ8IWN6 122 aa5.16□□□□□ -1.58
UBR4-212ENST00000475973 RASL10AQ92737 203 aa5.16□□□□□ -1.58
UBR4-212ENST00000475973 LINC01600Q96MT4 127 aa5.16□□□□□ -1.58
UBR4-212ENST00000475973 TPPP3Q9BW30 176 aa5.16□□□□□ -1.58
UBR4-212ENST00000475973 CUBNO60494 3623 aa5.15□□□□□ -1.58
UBR4-212ENST00000475973 TRAV40A0A0B4J280 105 aa5.15□□□□□ -1.59
UBR4-212ENST00000475973 TRBV6-5A0A0K0K1A5 114 aa5.15□□□□□ -1.59
UBR4-212ENST00000475973 TMEM89A2RUT3 159 aa5.15□□□□□ -1.59
UBR4-212ENST00000475973 H0Y8G0 127 aa5.15□□□□□ -1.59
UBR4-212ENST00000475973 NDUFA4O00483 81 aa5.15□□□□□ -1.59
UBR4-212ENST00000475973 ZNF207O43670 478 aaKnown RBP5.15□□□□□ -1.59
UBR4-212ENST00000475973 FSHBP01225 129 aa5.15□□□□□ -1.59
UBR4-212ENST00000475973 CRYGDP07320 174 aa5.15□□□□□ -1.59
UBR4-212ENST00000475973 PPIFP30405 207 aaKnown RBP5.15□□□□□ -1.59
UBR4-212ENST00000475973 UBE2D1P51668 147 aa5.15□□□□□ -1.59
UBR4-212ENST00000475973 POLR2KP53803 58 aaKnown RBP5.15□□□□□ -1.59
UBR4-212ENST00000475973 HES1Q14469 280 aa5.15□□□□□ -1.59
UBR4-212ENST00000475973 C12orf74Q32Q52 190 aa5.15□□□□□ -1.59
UBR4-212ENST00000475973 ORMDL2Q53FV1 153 aa5.15□□□□□ -1.59
UBR4-212ENST00000475973 TMEM78Q5T7P6 136 aa5.15□□□□□ -1.59
UBR4-212ENST00000475973 RNF182Q8N6D2 247 aa5.15□□□□□ -1.59
UBR4-212ENST00000475973 EEF1AKMT3Q96AZ1 226 aa5.15□□□□□ -1.59
UBR4-212ENST00000475973 C20orf173Q96LM9 149 aa5.15□□□□□ -1.59
UBR4-212ENST00000475973 SPATA25Q9BR10 227 aa5.15□□□□□ -1.59
UBR4-212ENST00000475973 SPANXB1Q9NS25 103 aaPredicted RBP5.15□□□□□ -1.59
UBR4-212ENST00000475973 ANK2Q01484 3957 aa5.14□□□□□ -1.59
UBR4-212ENST00000475973 DNAJC9-AS1A6NH13 148 aa5.14□□□□□ -1.59
UBR4-212ENST00000475973 LINC01548A6NM66 108 aa5.14□□□□□ -1.59
UBR4-212ENST00000475973 NCBP2LA6PVI3 153 aaKnown RBP5.14□□□□□ -1.59
UBR4-212ENST00000475973 TMEM238C9JI98 176 aa5.14□□□□□ -1.59
UBR4-212ENST00000475973 OVOL1O14753 267 aa5.14□□□□□ -1.59
UBR4-212ENST00000475973 PPP1R17O96001 155 aa5.14□□□□□ -1.59
UBR4-212ENST00000475973 IGHV3-23P01764 117 aa5.14□□□□□ -1.59
UBR4-212ENST00000475973 RNASE3P12724 160 aaKnown RBP5.14□□□□□ -1.59
UBR4-212ENST00000475973 NMUP48645 174 aa5.14□□□□□ -1.59
UBR4-212ENST00000475973 SUMO2P61956 95 aaKnown RBP5.14□□□□□ -1.59
UBR4-212ENST00000475973 RRN3P1Q2M238 152 aa5.14□□□□□ -1.59
UBR4-212ENST00000475973 MORN3Q6PF18 240 aaPredicted RBP5.14□□□□□ -1.59
UBR4-212ENST00000475973 GTSCR1Q86UQ5 136 aa5.14□□□□□ -1.59
UBR4-212ENST00000475973 SBSPONQ8IVN8 264 aa5.14□□□□□ -1.59
UBR4-212ENST00000475973 MYOZ3Q8TDC0 251 aa5.14□□□□□ -1.59
UBR4-212ENST00000475973 METTL26Q96S19 204 aa5.14□□□□□ -1.59
UBR4-212ENST00000475973 VPS25Q9BRG1 176 aa5.14□□□□□ -1.59
UBR4-212ENST00000475973 TTTY13Q9BZ97 58 aa5.14□□□□□ -1.59
UBR4-212ENST00000475973 TRAV21A0A0B4J279 112 aa5.13□□□□□ -1.59
UBR4-212ENST00000475973 IGIPA6NJ69 53 aa5.13□□□□□ -1.59
UBR4-212ENST00000475973 KLLNB2CW77 178 aa5.13□□□□□ -1.59
UBR4-212ENST00000475973 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.13□□□□□ -1.59
UBR4-212ENST00000475973 M0QXV9 152 aa5.13□□□□□ -1.59
UBR4-212ENST00000475973 TSHBP01222 138 aa5.13□□□□□ -1.59
UBR4-212ENST00000475973 PRSS1P07477 247 aa5.13□□□□□ -1.59
UBR4-212ENST00000475973 CD7P09564 240 aa5.13□□□□□ -1.59
UBR4-212ENST00000475973 PRB4P10163 310 aaPredicted RBP5.13□□□□□ -1.59
UBR4-212ENST00000475973 SAA4P35542 130 aa5.13□□□□□ -1.59
UBR4-212ENST00000475973 CFHR3Q02985 330 aa5.13□□□□□ -1.59
UBR4-212ENST00000475973 CLEC19AQ6UXS0 136 aa5.13□□□□□ -1.59
UBR4-212ENST00000475973 Q6ZQT7 251 aa5.13□□□□□ -1.59
UBR4-212ENST00000475973 ATP6V0E2Q8NHE4 81 aa5.13□□□□□ -1.59
UBR4-212ENST00000475973 AP1S3Q96PC3 154 aa5.13□□□□□ -1.59
UBR4-212ENST00000475973 DPH3P1Q9H4G8 78 aa5.13□□□□□ -1.59
UBR4-212ENST00000475973 ESM1Q9NQ30 184 aa5.13□□□□□ -1.59
UBR4-212ENST00000475973 IGLV4-69A0A075B6H9 119 aa5.12□□□□□ -1.59
UBR4-212ENST00000475973 IGHV3OR16-10A0A075B7F0 116 aa5.12□□□□□ -1.59
UBR4-212ENST00000475973 MYMXA0A1B0GTQ4 84 aa5.12□□□□□ -1.59
UBR4-212ENST00000475973 TEX48A0A1B0GUV7 120 aa5.12□□□□□ -1.59
UBR4-212ENST00000475973 G3V318 75 aa5.12□□□□□ -1.59
UBR4-212ENST00000475973 K7EMT4 169 aa5.12□□□□□ -1.59
UBR4-212ENST00000475973 NPFFO15130 113 aa5.12□□□□□ -1.59
UBR4-212ENST00000475973 IGHG2P01859 326 aa5.12□□□□□ -1.59
UBR4-212ENST00000475973 LGALS1P09382 135 aaKnown RBP5.12□□□□□ -1.59
UBR4-212ENST00000475973 IGHV4-38-2P0DP08 117 aa5.12□□□□□ -1.59
UBR4-212ENST00000475973 GCSHP23434 173 aa5.12□□□□□ -1.59
UBR4-212ENST00000475973 UBE2D3P61077 147 aa5.12□□□□□ -1.59
UBR4-212ENST00000475973 UBE2D2P62837 147 aa5.12□□□□□ -1.59
UBR4-212ENST00000475973 ATP5G2Q06055 141 aa5.12□□□□□ -1.59
UBR4-212ENST00000475973 RNF151Q2KHN1 245 aa5.12□□□□□ -1.59
UBR4-212ENST00000475973 BAALCQ8WXS3 180 aa5.12□□□□□ -1.59
UBR4-212ENST00000475973 USMG5Q96IX5 58 aa5.12□□□□□ -1.59
UBR4-212ENST00000475973 DUX5Q96PT3 197 aa5.12□□□□□ -1.59
UBR4-212ENST00000475973 ODF3Q96PU9 254 aa5.12□□□□□ -1.59
UBR4-212ENST00000475973 AMELXQ99217 191 aa5.12□□□□□ -1.59
UBR4-212ENST00000475973 EDA2RQ9HAV5 297 aa5.12□□□□□ -1.59
UBR4-212ENST00000475973 MOB4Q9Y3A3 225 aa5.12□□□□□ -1.59
UBR4-212ENST00000475973 ARHGAP32A7KAX9 2087 aa5.11□□□□□ -1.59
UBR4-212ENST00000475973 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.11□□□□□ -1.592e-12■■■■■ 31.1
UBR4-212ENST00000475973 TRAV41A0A0B4J266 112 aa5.11□□□□□ -1.59
UBR4-212ENST00000475973 PRSS29PA6NIE9 313 aa5.11□□□□□ -1.59
UBR4-212ENST00000475973 PLA2G1BP04054 148 aaKnown RBP5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms