RNA–Protein interactions for RNA: ENST00000475912.1

PRKD3-208, Transcript of protein kinase D3, humanhuman

TSL 3

Gene PRKD3, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-208ENST00000475912 ORM1P02763 201 aa2.48□□□□□ -2.01
PRKD3-208ENST00000475912 RANBP1P43487 201 aa2.48□□□□□ -2.01
PRKD3-208ENST00000475912 TAS2R46P59540 309 aa2.48□□□□□ -2.01
PRKD3-208ENST00000475912 SPCS3P61009 180 aa2.48□□□□□ -2.01
PRKD3-208ENST00000475912 RPL23P62829 140 aaKnown RBP2.48□□□□□ -2.01
PRKD3-208ENST00000475912 CIRBPQ14011 172 aaKnown RBP2.48□□□□□ -2.01
PRKD3-208ENST00000475912 NMSQ5H8A3 153 aa2.48□□□□□ -2.01
PRKD3-208ENST00000475912 DAZ4Q86SG3 579 aaKnown RBP2.48□□□□□ -2.01
PRKD3-208ENST00000475912 IQCF2Q8IXL9 164 aa2.48□□□□□ -2.01
PRKD3-208ENST00000475912 LGI3Q8N145 548 aa2.48□□□□□ -2.01
PRKD3-208ENST00000475912 ZNF555Q8NEP9 628 aa2.48□□□□□ -2.01
PRKD3-208ENST00000475912 ATP6V0E2Q8NHE4 81 aa2.48□□□□□ -2.01
PRKD3-208ENST00000475912 ISOC2Q96AB3 205 aa2.48□□□□□ -2.01
PRKD3-208ENST00000475912 TXNDC17Q9BRA2 123 aa2.48□□□□□ -2.01
PRKD3-208ENST00000475912 RHBDL2Q9NX52 303 aa2.48□□□□□ -2.01
PRKD3-208ENST00000475912 CHTOPQ9Y3Y2 248 aaKnown RBP2.48□□□□□ -2.01
PRKD3-208ENST00000475912 ORM2P19652 201 aa2.47□□□□□ -2.01
PRKD3-208ENST00000475912 PMCHP20382 165 aa2.47□□□□□ -2.01
PRKD3-208ENST00000475912 BTN1A1Q13410 526 aa2.47□□□□□ -2.01
PRKD3-208ENST00000475912 TRAM1Q15629 374 aa2.47□□□□□ -2.01
PRKD3-208ENST00000475912 MPV17L2Q567V2 206 aa2.47□□□□□ -2.01
PRKD3-208ENST00000475912 IBA57Q5T440 356 aaKnown RBP2.47□□□□□ -2.01
PRKD3-208ENST00000475912 SDIM1Q6ZPB5 146 aa2.47□□□□□ -2.01
PRKD3-208ENST00000475912 EIF4E3Q8N5X7 224 aaKnown RBP2.47□□□□□ -2.01
PRKD3-208ENST00000475912 OR5H6Q8NGV6 325 aa2.47□□□□□ -2.01
PRKD3-208ENST00000475912 GPR82Q96P67 336 aa2.47□□□□□ -2.01
PRKD3-208ENST00000475912 SCGB3A2Q96PL1 93 aa2.47□□□□□ -2.01
PRKD3-208ENST00000475912 TRGV9Q99603 122 aa2.47□□□□□ -2.01
PRKD3-208ENST00000475912 ACOT13Q9NPJ3 140 aa2.47□□□□□ -2.01
PRKD3-208ENST00000475912 ANAPC10Q9UM13 185 aa2.47□□□□□ -2.01
PRKD3-208ENST00000475912 TMEM56-RWDD3S4R434 201 aa2.47□□□□□ -2.01
PRKD3-208ENST00000475912 MUC19Q7Z5P9 8384 aa2.47□□□□□ -2.01
PRKD3-208ENST00000475912 TRAV6A0A075B6T7 132 aa2.46□□□□□ -2.02
PRKD3-208ENST00000475912 C7orf71A4D174 169 aa2.46□□□□□ -2.02
PRKD3-208ENST00000475912 CEBPZOSA8MTT3 80 aa2.46□□□□□ -2.02
PRKD3-208ENST00000475912 KRBOX1C9JBD0 128 aa2.46□□□□□ -2.02
PRKD3-208ENST00000475912 NDUFC2-KCTD14E9PQ53 114 aa2.46□□□□□ -2.02
PRKD3-208ENST00000475912 H3BRN7 92 aa2.46□□□□□ -2.02
PRKD3-208ENST00000475912 SLC17A3O00476 420 aa2.46□□□□□ -2.02
PRKD3-208ENST00000475912 ATG12O94817 140 aa2.46□□□□□ -2.02
PRKD3-208ENST00000475912 FABP1P07148 127 aa2.46□□□□□ -2.02
PRKD3-208ENST00000475912 LINC00869P0C866 280 aa2.46□□□□□ -2.02
PRKD3-208ENST00000475912 MYL9P24844 172 aa2.46□□□□□ -2.02
PRKD3-208ENST00000475912 HLA-DMAP28067 261 aa2.46□□□□□ -2.02
PRKD3-208ENST00000475912 MLLT11Q13015 90 aaPredicted RBP2.46□□□□□ -2.02
PRKD3-208ENST00000475912 SP6Q3SY56 376 aa2.46□□□□□ -2.02
PRKD3-208ENST00000475912 C5orf47Q569G3 176 aa2.46□□□□□ -2.02
PRKD3-208ENST00000475912 PRR9Q5T870 116 aa2.46□□□□□ -2.02
PRKD3-208ENST00000475912 SPINK6Q6UWN8 80 aa2.46□□□□□ -2.02
PRKD3-208ENST00000475912 C9orf163Q8N9P6 203 aa2.46□□□□□ -2.02
PRKD3-208ENST00000475912 OR10P1Q8NGE3 313 aa2.46□□□□□ -2.02
PRKD3-208ENST00000475912 OR5H2Q8NGV7 314 aa2.46□□□□□ -2.02
PRKD3-208ENST00000475912 LHFPL5Q8TAF8 219 aa2.46□□□□□ -2.02
PRKD3-208ENST00000475912 SHANK2-AS3Q9BTD1 123 aa2.46□□□□□ -2.02
PRKD3-208ENST00000475912 TMEM243Q9BU79 118 aa2.46□□□□□ -2.02
PRKD3-208ENST00000475912 IFT46Q9NQC8 304 aa2.46□□□□□ -2.02
PRKD3-208ENST00000475912 VAX2Q9UIW0 290 aa2.46□□□□□ -2.02
PRKD3-208ENST00000475912 USH2AO75445 5202 aa2.46□□□□□ -2.02
PRKD3-208ENST00000475912 TRAV8-1A0A0A6YYK1 113 aa2.45□□□□□ -2.02
PRKD3-208ENST00000475912 C3orf85A0A1B0GTC6 90 aa2.45□□□□□ -2.02
PRKD3-208ENST00000475912 GGTLC3B5MD39 225 aa2.45□□□□□ -2.02
PRKD3-208ENST00000475912 GABARAPH6UMI1 98 aa2.45□□□□□ -2.02
PRKD3-208ENST00000475912 PITX3O75364 302 aa2.45□□□□□ -2.02
PRKD3-208ENST00000475912 HLA-DQA1P01909 254 aa2.45□□□□□ -2.02
PRKD3-208ENST00000475912 SLC25A5P05141 298 aaKnown RBP2.45□□□□□ -2.02
PRKD3-208ENST00000475912 RPL7P18124 248 aaKnown RBP2.45□□□□□ -2.02
PRKD3-208ENST00000475912 S100GP29377 79 aa2.45□□□□□ -2.02
PRKD3-208ENST00000475912 RNASE4P34096 147 aaKnown RBP2.45□□□□□ -2.02
PRKD3-208ENST00000475912 PIGPP57054 158 aa2.45□□□□□ -2.02
PRKD3-208ENST00000475912 LPCAT3Q6P1A2 487 aa2.45□□□□□ -2.02
PRKD3-208ENST00000475912 DPPA3Q6W0C5 159 aa2.45□□□□□ -2.02
PRKD3-208ENST00000475912 C8orf59Q8N0T1 100 aaPredicted RBP2.45□□□□□ -2.02
PRKD3-208ENST00000475912 LRRC20Q8TCA0 184 aa2.45□□□□□ -2.02
PRKD3-208ENST00000475912 SPACA4Q8TDM5 124 aa2.45□□□□□ -2.02
PRKD3-208ENST00000475912 ZC2HC1AQ96GY0 325 aa2.45□□□□□ -2.02
PRKD3-208ENST00000475912 FAM19A4Q96LR4 140 aa2.45□□□□□ -2.02
PRKD3-208ENST00000475912 LINC00477Q96M19 166 aa2.45□□□□□ -2.02
PRKD3-208ENST00000475912 ODF3Q96PU9 254 aa2.45□□□□□ -2.02
PRKD3-208ENST00000475912 MGLLQ99685 303 aa2.45□□□□□ -2.02
PRKD3-208ENST00000475912 TMEM147Q9BVK8 224 aa2.45□□□□□ -2.02
PRKD3-208ENST00000475912 DIABLOQ9NR28 239 aa2.45□□□□□ -2.02
PRKD3-208ENST00000475912 C8orf17Q9NRJ1 99 aa2.45□□□□□ -2.02
PRKD3-208ENST00000475912 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.45□□□□□ -2.02
PRKD3-208ENST00000475912 TRAV4A0A0B4J268 109 aa2.44□□□□□ -2.02
PRKD3-208ENST00000475912 MUC21A0A0G2JKD1 596 aa2.44□□□□□ -2.02
PRKD3-208ENST00000475912 TRDV1A0A1B0GX56 115 aa2.44□□□□□ -2.02
PRKD3-208ENST00000475912 A0A1W2PPV4 95 aa2.44□□□□□ -2.02
PRKD3-208ENST00000475912 CRYM-AS1A6NIL9 109 aa2.44□□□□□ -2.02
PRKD3-208ENST00000475912 CFDP00746 253 aaPredicted RBP2.44□□□□□ -2.02
PRKD3-208ENST00000475912 PFN1P07737 140 aaKnown RBP2.44□□□□□ -2.02
PRKD3-208ENST00000475912 CXCL2P19875 107 aa2.44□□□□□ -2.02
PRKD3-208ENST00000475912 TSPAN5P62079 268 aa2.44□□□□□ -2.02
PRKD3-208ENST00000475912 RNASE13Q5GAN3 156 aaKnown RBP2.44□□□□□ -2.02
PRKD3-208ENST00000475912 ZFP1Q6P2D0 407 aa2.44□□□□□ -2.02
PRKD3-208ENST00000475912 IGFL1Q6UW32 110 aa2.44□□□□□ -2.02
PRKD3-208ENST00000475912 SLC25A29Q8N8R3 303 aa2.44□□□□□ -2.02
PRKD3-208ENST00000475912 RNASE11Q8TAA1 199 aaKnown RBP2.44□□□□□ -2.02
PRKD3-208ENST00000475912 DTD1Q8TEA8 209 aa2.44□□□□□ -2.02
PRKD3-208ENST00000475912 RMI2Q96E14 147 aa2.44□□□□□ -2.02
PRKD3-208ENST00000475912 TMEM222Q9H0R3 208 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms