RNA–Protein interactions for RNA: ENST00000475491.1

KCNIP3-206, Transcript of potassium voltage-gated channel interacting protein 3, humanhuman

TSL 1 (best)

Gene KCNIP3, Length 3,658 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3-206ENST00000475491 PRM2P04554 102 aa8.69□□□□□ -1.02
KCNIP3-206ENST00000475491 ANK3Q12955 4377 aaKnown RBP8.68□□□□□ -1.02
KCNIP3-206ENST00000475491 TRBV7-1A0A0A6YYK4 115 aa8.68□□□□□ -1.02
KCNIP3-206ENST00000475491 K7EMI3 77 aa8.68□□□□□ -1.02
KCNIP3-206ENST00000475491 M0QXV9 152 aa8.68□□□□□ -1.02
KCNIP3-206ENST00000475491 LY6G6DO95868 133 aa8.68□□□□□ -1.02
KCNIP3-206ENST00000475491 EVI2AP22794 236 aa8.68□□□□□ -1.02
KCNIP3-206ENST00000475491 A0A1B0GUT8 65 aa8.68□□□□□ -1.02
KCNIP3-206ENST00000475491 SNCGO76070 127 aa8.68□□□□□ -1.02
KCNIP3-206ENST00000475491 C20orf173Q96LM9 149 aa8.68□□□□□ -1.02
KCNIP3-206ENST00000475491 TMEM14CQ9P0S9 112 aa8.68□□□□□ -1.02
KCNIP3-206ENST00000475491 MRPS12O15235 138 aaKnown RBP8.68□□□□□ -1.02
KCNIP3-206ENST00000475491 FOXE3Q13461 319 aa8.68□□□□□ -1.02
KCNIP3-206ENST00000475491 FAM106AQ4KMX7 169 aa8.68□□□□□ -1.02
KCNIP3-206ENST00000475491 PRR25Q96S07 402 aa8.68□□□□□ -1.02
KCNIP3-206ENST00000475491 OR9G4Q8NGQ1 327 aa8.67□□□□□ -1.02
KCNIP3-206ENST00000475491 AP5S1Q9NUS5 200 aa8.67□□□□□ -1.02
KCNIP3-206ENST00000475491 C19orf71A6NCJ1 209 aa8.67□□□□□ -1.02
KCNIP3-206ENST00000475491 GAS8-AS1O95177 125 aa8.67□□□□□ -1.02
KCNIP3-206ENST00000475491 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.67□□□□□ -1.02
KCNIP3-206ENST00000475491 TRAV12-2A0A075B6T6 113 aa8.67□□□□□ -1.02
KCNIP3-206ENST00000475491 HOXD3P31249 432 aaPredicted RBP8.67□□□□□ -1.02
KCNIP3-206ENST00000475491 Q6ZSV7 163 aa8.67□□□□□ -1.02
KCNIP3-206ENST00000475491 C2orf91Q6ZV80 131 aa8.67□□□□□ -1.02
KCNIP3-206ENST00000475491 PRELID3AQ96N28 172 aa8.67□□□□□ -1.02
KCNIP3-206ENST00000475491 J3QLI3 93 aa8.66□□□□□ -1.02
KCNIP3-206ENST00000475491 GATA1P15976 413 aaPredicted RBP8.66□□□□□ -1.02
KCNIP3-206ENST00000475491 MGAM2Q2M2H8 2515 aa8.66□□□□□ -1.02
KCNIP3-206ENST00000475491 D6R8Y8 96 aa8.66□□□□□ -1.02
KCNIP3-206ENST00000475491 IGHG4P01861 327 aa8.66□□□□□ -1.02
KCNIP3-206ENST00000475491 CD28P10747 220 aa8.66□□□□□ -1.02
KCNIP3-206ENST00000475491 PSMG4Q5JS54 123 aa8.66□□□□□ -1.02
KCNIP3-206ENST00000475491 TMEM78Q5T7P6 136 aa8.66□□□□□ -1.02
KCNIP3-206ENST00000475491 FAM231DQ6ZW35 169 aa8.66□□□□□ -1.02
KCNIP3-206ENST00000475491 AGPAT4-IT1Q9H0P7 198 aa8.66□□□□□ -1.02
KCNIP3-206ENST00000475491 TNFRSF18Q9Y5U5 241 aa8.66□□□□□ -1.02
KCNIP3-206ENST00000475491 CACNG7P62955 275 aa8.66□□□□□ -1.02
KCNIP3-206ENST00000475491 C18orf15Q96N68 181 aa8.66□□□□□ -1.02
KCNIP3-206ENST00000475491 TRAV26-2A0A0B4J265 109 aa8.65□□□□□ -1.02
KCNIP3-206ENST00000475491 KRTAP1-1Q07627 177 aa8.65□□□□□ -1.02
KCNIP3-206ENST00000475491 Q6ZUT4 128 aa8.65□□□□□ -1.02
KCNIP3-206ENST00000475491 M0R381 172 aa8.65□□□□□ -1.02
KCNIP3-206ENST00000475491 CHCHD1Q96BP2 118 aaKnown RBP8.65□□□□□ -1.02
KCNIP3-206ENST00000475491 FAM223BA6NKX1 122 aa8.65□□□□□ -1.03
KCNIP3-206ENST00000475491 PSMB8P28062 276 aa8.65□□□□□ -1.03
KCNIP3-206ENST00000475491 FAM223AQ8IWN6 122 aa8.65□□□□□ -1.03
KCNIP3-206ENST00000475491 LRRC75A-AS1Q8N1F1 130 aa8.64□□□□□ -1.03
KCNIP3-206ENST00000475491 IFI27P40305 119 aaPredicted RBP8.64□□□□□ -1.03
KCNIP3-206ENST00000475491 MEIG1Q5JSS6 88 aa8.64□□□□□ -1.03
KCNIP3-206ENST00000475491 PCP2Q8IVA1 136 aa8.64□□□□□ -1.03
KCNIP3-206ENST00000475491 TRAV8-2A0A0B4J237 113 aa8.64□□□□□ -1.03
KCNIP3-206ENST00000475491 RNASE4P34096 147 aaKnown RBP8.64□□□□□ -1.03
KCNIP3-206ENST00000475491 PSMB2P49721 201 aa8.64□□□□□ -1.03
KCNIP3-206ENST00000475491 FXYD2P54710 66 aa8.64□□□□□ -1.03
KCNIP3-206ENST00000475491 HIST1H4GQ99525 98 aa8.64□□□□□ -1.03
KCNIP3-206ENST00000475491 CKS2P33552 79 aa8.63□□□□□ -1.03
KCNIP3-206ENST00000475491 CYSRT1A8MQ03 144 aa8.63□□□□□ -1.03
KCNIP3-206ENST00000475491 IGLV1-40P01703 118 aa8.63□□□□□ -1.03
KCNIP3-206ENST00000475491 S100A4P26447 101 aaKnown RBP8.63□□□□□ -1.03
KCNIP3-206ENST00000475491 XGP55808 180 aa8.63□□□□□ -1.03
KCNIP3-206ENST00000475491 RIGQ13278 110 aa8.63□□□□□ -1.03
KCNIP3-206ENST00000475491 DAZ1Q9NQZ3 744 aaKnown RBP8.63□□□□□ -1.03
KCNIP3-206ENST00000475491 IGHV3OR16-12A0A075B7B8 117 aa8.62□□□□□ -1.03
KCNIP3-206ENST00000475491 CCDC179H3BU77 68 aa8.62□□□□□ -1.03
KCNIP3-206ENST00000475491 BRI3O95415 125 aa8.62□□□□□ -1.03
KCNIP3-206ENST00000475491 SCGB1C2P0DMR2 95 aa8.62□□□□□ -1.03
KCNIP3-206ENST00000475491 PKD1L1Q8TDX9 2849 aa8.62□□□□□ -1.03
KCNIP3-206ENST00000475491 KNCNA6PVL3 124 aa8.62□□□□□ -1.03
KCNIP3-206ENST00000475491 FOXI1Q12951 378 aa8.62□□□□□ -1.03
KCNIP3-206ENST00000475491 C19orf54Q5BKX5 351 aa8.62□□□□□ -1.03
KCNIP3-206ENST00000475491 APRG1Q8IVJ8 170 aa8.62□□□□□ -1.03
KCNIP3-206ENST00000475491 DLX4Q92988 240 aaPredicted RBP8.62□□□□□ -1.03
KCNIP3-206ENST00000475491 C11orf21Q9P2W6 132 aa8.62□□□□□ -1.03
KCNIP3-206ENST00000475491 PRSS1P07477 247 aa8.62□□□□□ -1.03
KCNIP3-206ENST00000475491 FOXI2Q6ZQN5 318 aa8.62□□□□□ -1.03
KCNIP3-206ENST00000475491 URB1-AS1Q96HZ7 61 aa8.62□□□□□ -1.03
KCNIP3-206ENST00000475491 USMG5Q96IX5 58 aa8.62□□□□□ -1.03
KCNIP3-206ENST00000475491 MAP1LC3AQ9H492 121 aa8.62□□□□□ -1.03
KCNIP3-206ENST00000475491 A0A1B0GXF2 115 aa8.61□□□□□ -1.03
KCNIP3-206ENST00000475491 FABP5P3A8MUU1 101 aa8.61□□□□□ -1.03
KCNIP3-206ENST00000475491 PDE6HQ13956 83 aa8.61□□□□□ -1.03
KCNIP3-206ENST00000475491 PRR9Q5T870 116 aa8.61□□□□□ -1.03
KCNIP3-206ENST00000475491 SPANXN1Q5VSR9 72 aa8.61□□□□□ -1.03
KCNIP3-206ENST00000475491 TMEM190Q8WZ59 177 aa8.61□□□□□ -1.03
KCNIP3-206ENST00000475491 RAX2Q96IS3 184 aa8.61□□□□□ -1.03
KCNIP3-206ENST00000475491 LINC00477Q96M19 166 aa8.61□□□□□ -1.03
KCNIP3-206ENST00000475491 PPDPFQ9H3Y8 114 aa8.61□□□□□ -1.03
KCNIP3-206ENST00000475491 EMP1P54849 157 aa8.61□□□□□ -1.03
KCNIP3-206ENST00000475491 GPHB5Q86YW7 130 aa8.61□□□□□ -1.03
KCNIP3-206ENST00000475491 IGHV7-4-1A0A0J9YVY3 117 aa8.6□□□□□ -1.03
KCNIP3-206ENST00000475491 KLF5Q13887 457 aaPredicted RBP8.6□□□□□ -1.03
KCNIP3-206ENST00000475491 MRPL23Q16540 153 aaKnown RBP8.6□□□□□ -1.03
KCNIP3-206ENST00000475491 C5orf47Q569G3 176 aa8.6□□□□□ -1.03
KCNIP3-206ENST00000475491 LYPD1Q8N2G4 141 aa8.6□□□□□ -1.03
KCNIP3-206ENST00000475491 ZNF492Q9P255 531 aa8.6□□□□□ -1.03
KCNIP3-206ENST00000475491 NDUFA4O00483 81 aa8.6□□□□□ -1.03
KCNIP3-206ENST00000475491 CHAC1Q9BUX1 264 aa8.6□□□□□ -1.03
KCNIP3-206ENST00000475491 FSHBP01225 129 aa8.6□□□□□ -1.03
KCNIP3-206ENST00000475491 IFITM1P13164 125 aa8.6□□□□□ -1.03
KCNIP3-206ENST00000475491 KLK9Q9UKQ9 250 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms