RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 ZNF747Q9BV97 191 aa8.51□□□□□ -1.05
VAPB-204ENST00000475243 COX7A2LO14548 114 aa8.51□□□□□ -1.05
VAPB-204ENST00000475243 C10orf91Q5T1B1 145 aa8.51□□□□□ -1.05
VAPB-204ENST00000475243 ORMDL1Q9P0S3 153 aa8.51□□□□□ -1.05
VAPB-204ENST00000475243 TEX48A0A1B0GUV7 120 aa8.51□□□□□ -1.05
VAPB-204ENST00000475243 CCL25O15444 150 aa8.51□□□□□ -1.05
VAPB-204ENST00000475243 MRPL23Q16540 153 aaKnown RBP8.51□□□□□ -1.05
VAPB-204ENST00000475243 Q8N9W7 124 aa8.51□□□□□ -1.05
VAPB-204ENST00000475243 TET2Q6N021 2002 aaPredicted RBP8.51□□□□□ -1.05
VAPB-204ENST00000475243 TIRAPP58753 221 aa8.5□□□□□ -1.05
VAPB-204ENST00000475243 DEFB135Q30KP9 77 aa8.5□□□□□ -1.05
VAPB-204ENST00000475243 ALPK3Q96L96 1907 aa8.5□□□□□ -1.05
VAPB-204ENST00000475243 RPL39P62891 51 aaKnown RBP8.5□□□□□ -1.05
VAPB-204ENST00000475243 Q8N1Y9 231 aa8.5□□□□□ -1.05
VAPB-204ENST00000475243 NUP210LQ5VU65 1888 aa8.5□□□□□ -1.05
VAPB-204ENST00000475243 IGLV11-55A0A075B6I3 123 aa8.5□□□□□ -1.05
VAPB-204ENST00000475243 SEM1Q6ZVN7 128 aa8.5□□□□□ -1.05
VAPB-204ENST00000475243 C8orf31Q8N9H6 132 aa8.5□□□□□ -1.05
VAPB-204ENST00000475243 GAGE12HA6NDE8 117 aa8.5□□□□□ -1.05
VAPB-204ENST00000475243 CTSGP08311 255 aa8.5□□□□□ -1.05
VAPB-204ENST00000475243 PRAC2D3DTV9 90 aa8.49□□□□□ -1.05
VAPB-204ENST00000475243 PROP1O75360 226 aa8.49□□□□□ -1.05
VAPB-204ENST00000475243 CFC1BP0CG36 223 aa8.49□□□□□ -1.05
VAPB-204ENST00000475243 CFC1P0CG37 223 aa8.49□□□□□ -1.05
VAPB-204ENST00000475243 ZFP36P26651 326 aaKnown RBP8.49□□□□□ -1.05
VAPB-204ENST00000475243 DAZ2Q13117 558 aaKnown RBP8.49□□□□□ -1.05
VAPB-204ENST00000475243 CDPF1Q6NVV7 123 aa8.49□□□□□ -1.05
VAPB-204ENST00000475243 DAZ4Q86SG3 579 aaKnown RBP8.49□□□□□ -1.05
VAPB-204ENST00000475243 DAZ3Q9NR90 486 aaKnown RBP8.49□□□□□ -1.05
VAPB-204ENST00000475243 C2orf70A6NJV1 201 aa8.49□□□□□ -1.05
VAPB-204ENST00000475243 C16orf54Q6UWD8 224 aa8.49□□□□□ -1.05
VAPB-204ENST00000475243 LINC00173Q6ZV60 143 aa8.49□□□□□ -1.05
VAPB-204ENST00000475243 TTC28Q96AY4 2481 aa8.49□□□□□ -1.05
VAPB-204ENST00000475243 NCR3O14931 201 aa8.49□□□□□ -1.05
VAPB-204ENST00000475243 SND1-IT1Q9HBX3 110 aa8.48□□□□□ -1.05
VAPB-204ENST00000475243 ACACBO00763 2458 aa8.48□□□□□ -1.05
VAPB-204ENST00000475243 IGKV1-17P01599 117 aa8.48□□□□□ -1.05
VAPB-204ENST00000475243 WFDC11Q8NEX6 87 aa8.48□□□□□ -1.05
VAPB-204ENST00000475243 ZFP2Q6ZN57 461 aa8.48□□□□□ -1.05
VAPB-204ENST00000475243 RBM3P98179 157 aaKnown RBP8.48□□□□□ -1.05
VAPB-204ENST00000475243 SPANXA1Q9NS26 97 aa8.48□□□□□ -1.05
VAPB-204ENST00000475243 E7EUB6 86 aa8.48□□□□□ -1.05
VAPB-204ENST00000475243 ATP5G1P05496 136 aa8.48□□□□□ -1.05
VAPB-204ENST00000475243 LENEPQ9Y5L5 61 aa8.48□□□□□ -1.05
VAPB-204ENST00000475243 HERV-K104P63124 156 aa8.48□□□□□ -1.05
VAPB-204ENST00000475243 C10orf105Q8TEF2 133 aa8.48□□□□□ -1.05
VAPB-204ENST00000475243 A0A0J9YXV3 536 aa8.48□□□□□ -1.05
VAPB-204ENST00000475243 MUSTN1Q8IVN3 82 aa8.48□□□□□ -1.05
VAPB-204ENST00000475243 MUC4Q99102 2169 aa8.47□□□□□ -1.05
VAPB-204ENST00000475243 C5orf47Q569G3 176 aa8.47□□□□□ -1.05
VAPB-204ENST00000475243 IGFL2Q6UWQ7 119 aa8.47□□□□□ -1.05
VAPB-204ENST00000475243 TRBV7-3A0A075B6L6 115 aa8.47□□□□□ -1.05
VAPB-204ENST00000475243 TRBV12-3P01733 135 aa8.47□□□□□ -1.05
VAPB-204ENST00000475243 SH2D6Q7Z4S9 175 aa8.47□□□□□ -1.05
VAPB-204ENST00000475243 WISP2O76076 250 aa8.47□□□□□ -1.05
VAPB-204ENST00000475243 PATE2Q6UY27 113 aa8.47□□□□□ -1.05
VAPB-204ENST00000475243 SIVA1O15304 175 aa8.46□□□□□ -1.05
VAPB-204ENST00000475243 CUL9Q8IWT3 2517 aa8.46□□□□□ -1.05
VAPB-204ENST00000475243 Q8NFD4 153 aa8.46□□□□□ -1.05
VAPB-204ENST00000475243 FUSP35637 526 aaKnown RBP eCLIP8.46□□□□□ -1.06
VAPB-204ENST00000475243 CITED1Q99966 193 aa8.46□□□□□ -1.06
VAPB-204ENST00000475243 KLK12Q9UKR0 248 aa8.46□□□□□ -1.06
VAPB-204ENST00000475243 TDRG1Q3Y452 100 aa8.45□□□□□ -1.06
VAPB-204ENST00000475243 IGKV3D-7A0A0C4DH55 119 aa8.45□□□□□ -1.06
VAPB-204ENST00000475243 IGLL5B9A064 214 aa8.45□□□□□ -1.06
VAPB-204ENST00000475243 UBE2AP49459 152 aa8.45□□□□□ -1.06
VAPB-204ENST00000475243 HIVEP3Q5T1R4 2406 aa8.45□□□□□ -1.06
VAPB-204ENST00000475243 WDR87Q6ZQQ6 2873 aa8.45□□□□□ -1.06
VAPB-204ENST00000475243 NUPR1O60356 82 aa8.45□□□□□ -1.06
VAPB-204ENST00000475243 GTSF1Q8WW33 167 aa8.45□□□□□ -1.06
VAPB-204ENST00000475243 A4D1N5 150 aa8.45□□□□□ -1.06
VAPB-204ENST00000475243 IL15RAQ13261 267 aa8.45□□□□□ -1.06
VAPB-204ENST00000475243 MDFICQ9P1T7 246 aa8.45□□□□□ -1.06
VAPB-204ENST00000475243 MRPL36Q9P0J6 103 aaKnown RBP8.44□□□□□ -1.06
VAPB-204ENST00000475243 C9orf47Q6ZRZ4 202 aa8.44□□□□□ -1.06
VAPB-204ENST00000475243 Q8N7P7 452 aa8.44□□□□□ -1.06
VAPB-204ENST00000475243 BAALCQ8WXS3 180 aa8.44□□□□□ -1.06
VAPB-204ENST00000475243 A0A1W2PNU3 283 aaPredicted RBP8.44□□□□□ -1.06
VAPB-204ENST00000475243 IGHG2P01859 326 aa8.44□□□□□ -1.06
VAPB-204ENST00000475243 UNQ9165/PRO28630Q6UXU0 137 aa8.44□□□□□ -1.06
VAPB-204ENST00000475243 EXPH5Q8NEV8 1989 aa8.43□□□□□ -1.06
VAPB-204ENST00000475243 PRSS47A8MTI9 375 aa8.43□□□□□ -1.06
VAPB-204ENST00000475243 RNF152Q8N8N0 203 aa8.43□□□□□ -1.06
VAPB-204ENST00000475243 ANKRD39Q53RE8 183 aa8.43□□□□□ -1.06
VAPB-204ENST00000475243 TEX22C9J3V5 150 aa8.43□□□□□ -1.06
VAPB-204ENST00000475243 VSIG2Q96IQ7 327 aa8.43□□□□□ -1.06
VAPB-204ENST00000475243 KRTAP27-1Q3LI81 207 aa8.42□□□□□ -1.06
VAPB-204ENST00000475243 C4orf48Q5BLP8 95 aa8.42□□□□□ -1.06
VAPB-204ENST00000475243 FAM167A-AS1Q96KT0 104 aa8.42□□□□□ -1.06
VAPB-204ENST00000475243 DEFB125Q8N687 156 aa8.42□□□□□ -1.06
VAPB-204ENST00000475243 TTTY13Q9BZ97 58 aa8.42□□□□□ -1.06
VAPB-204ENST00000475243 WI2-2373I1.2A0A1W2PRP0 233 aa8.42□□□□□ -1.06
VAPB-204ENST00000475243 CHKB-CPT1BH3BT56 60 aa8.42□□□□□ -1.06
VAPB-204ENST00000475243 OPRPNQ99935 248 aaPredicted RBP8.42□□□□□ -1.06
VAPB-204ENST00000475243 TM2D2Q9BX73 214 aa8.42□□□□□ -1.06
VAPB-204ENST00000475243 MYO18BQ8IUG5 2567 aa8.41□□□□□ -1.06
VAPB-204ENST00000475243 ODF3L1Q8IXM7 274 aa8.41□□□□□ -1.06
VAPB-204ENST00000475243 C4orf3Q8WVX3 66 aa8.41□□□□□ -1.06
VAPB-204ENST00000475243 CACNA1AO00555 2505 aa8.41□□□□□ -1.06
VAPB-204ENST00000475243 LYPD6BQ8NI32 183 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms