RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 Q6ZSN1 163 aa11.71□□□□□ -0.53
SCAF11-206ENST00000474828 UPK3BQ9BT76 320 aa11.71□□□□□ -0.53
SCAF11-206ENST00000474828 ICOSQ9Y6W8 199 aa11.71□□□□□ -0.53
SCAF11-206ENST00000474828 KIF25-AS1Q9Y6Z4 181 aa11.71□□□□□ -0.53
SCAF11-206ENST00000474828 M0R381 172 aa11.7□□□□□ -0.54
SCAF11-206ENST00000474828 RPL23P62829 140 aaKnown RBP11.7□□□□□ -0.54
SCAF11-206ENST00000474828 ESRGQ1W209 222 aa11.7□□□□□ -0.54
SCAF11-206ENST00000474828 GTSF1Q8WW33 167 aa11.7□□□□□ -0.54
SCAF11-206ENST00000474828 ISOC2Q96AB3 205 aa11.7□□□□□ -0.54
SCAF11-206ENST00000474828 NAT8Q9UHE5 227 aa11.7□□□□□ -0.54
SCAF11-206ENST00000474828 LINC00588Q9Y4M8 146 aa11.7□□□□□ -0.54
SCAF11-206ENST00000474828 DNAH2Q9P225 4427 aa11.69□□□□□ -0.54
SCAF11-206ENST00000474828 FAM231BA6NCW3 169 aa11.69□□□□□ -0.54
SCAF11-206ENST00000474828 LINC00694P0DN24 101 aa11.69□□□□□ -0.54
SCAF11-206ENST00000474828 CCL18P55774 89 aa11.69□□□□□ -0.54
SCAF11-206ENST00000474828 TIRAPP58753 221 aa11.69□□□□□ -0.54
SCAF11-206ENST00000474828 LINC00315P59091 139 aa11.69□□□□□ -0.54
SCAF11-206ENST00000474828 CACNG7P62955 275 aa11.69□□□□□ -0.54
SCAF11-206ENST00000474828 RHOHQ15669 191 aa11.69□□□□□ -0.54
SCAF11-206ENST00000474828 SOHLH1Q5JUK2 328 aa11.69□□□□□ -0.54
SCAF11-206ENST00000474828 ZNRF2Q8NHG8 242 aa11.69□□□□□ -0.54
SCAF11-206ENST00000474828 A8MWL6 223 aa11.68□□□□□ -0.54
SCAF11-206ENST00000474828 GATCO43716 136 aaKnown RBP11.68□□□□□ -0.54
SCAF11-206ENST00000474828 GYPEP15421 78 aa11.68□□□□□ -0.54
SCAF11-206ENST00000474828 SH2D6Q7Z4S9 175 aa11.68□□□□□ -0.54
SCAF11-206ENST00000474828 GFRA4Q9GZZ7 299 aa11.68□□□□□ -0.54
SCAF11-206ENST00000474828 MRPS16Q9Y3D3 137 aaKnown RBP11.68□□□□□ -0.54
SCAF11-206ENST00000474828 EPPK1P58107 5090 aaKnown RBP11.67□□□□□ -0.54
SCAF11-206ENST00000474828 ERVFC1-1P60608 527 aa11.67□□□□□ -0.54
SCAF11-206ENST00000474828 SPANXN1Q5VSR9 72 aa11.67□□□□□ -0.54
SCAF11-206ENST00000474828 LYZL1Q6UWQ5 148 aa11.67□□□□□ -0.54
SCAF11-206ENST00000474828 NEGR1Q7Z3B1 354 aa11.67□□□□□ -0.54
SCAF11-206ENST00000474828 DNAH10Q8IVF4 4471 aa11.66□□□□□ -0.54
SCAF11-206ENST00000474828 IGHV3-73A0A0B4J1V6 119 aa11.66□□□□□ -0.54
SCAF11-206ENST00000474828 UQCC3Q6UW78 93 aa11.66□□□□□ -0.54
SCAF11-206ENST00000474828 LYPD5Q6UWN5 251 aa11.66□□□□□ -0.54
SCAF11-206ENST00000474828 PRADC1Q9BSG0 188 aa11.66□□□□□ -0.54
SCAF11-206ENST00000474828 V9GYV3 84 aa11.66□□□□□ -0.54
SCAF11-206ENST00000474828 A0A087WWL8 130 aa11.65□□□□□ -0.54
SCAF11-206ENST00000474828 TRBV10-1A0A0K0K1A3 114 aa11.65□□□□□ -0.54
SCAF11-206ENST00000474828 LOC100131303A0A0U1RQF7 123 aa11.65□□□□□ -0.54
SCAF11-206ENST00000474828 RAB4BP61018 213 aa11.65□□□□□ -0.54
SCAF11-206ENST00000474828 Q6ZR54 194 aa11.65□□□□□ -0.54
SCAF11-206ENST00000474828 TSKUQ8WUA8 353 aa11.65□□□□□ -0.54
SCAF11-206ENST00000474828 AP1S3Q96PC3 154 aa11.65□□□□□ -0.54
SCAF11-206ENST00000474828 MSRB1Q9NZV6 116 aa11.65□□□□□ -0.54
SCAF11-206ENST00000474828 MUC21A0A0G2JKD1 596 aa11.64□□□□□ -0.55
SCAF11-206ENST00000474828 MUC21A0A140T8X8 626 aa11.64□□□□□ -0.55
SCAF11-206ENST00000474828 NTF3P20783 257 aa11.64□□□□□ -0.55
SCAF11-206ENST00000474828 SRIP30626 198 aa11.64□□□□□ -0.55
SCAF11-206ENST00000474828 UBE2DNLQ8IWF7 75 aa11.64□□□□□ -0.55
SCAF11-206ENST00000474828 C14orf178Q8N769 122 aaPredicted RBP11.64□□□□□ -0.55
SCAF11-206ENST00000474828 Q9UF83 564 aa11.64□□□□□ -0.55
SCAF11-206ENST00000474828 LINC00862A6NCI5 91 aa11.63□□□□□ -0.55
SCAF11-206ENST00000474828 C15orf54Q8N8G6 183 aa11.63□□□□□ -0.55
SCAF11-206ENST00000474828 OR10G8Q8NGN5 311 aa11.63□□□□□ -0.55
SCAF11-206ENST00000474828 BIRC6Q9NR09 4857 aa11.63□□□□□ -0.55
SCAF11-206ENST00000474828 FAM74A4Q5TZK3 123 aa11.62□□□□□ -0.55
SCAF11-206ENST00000474828 DNAH17Q9UFH2 4485 aa11.61□□□□□ -0.55
SCAF11-206ENST00000474828 TRGC1P0CF51 173 aa11.61□□□□□ -0.55
SCAF11-206ENST00000474828 PNRC1Q12796 327 aaPredicted RBP11.61□□□□□ -0.55
SCAF11-206ENST00000474828 ADIRFQ15847 76 aa11.61□□□□□ -0.55
SCAF11-206ENST00000474828 TPPP3Q9BW30 176 aa11.61□□□□□ -0.55
SCAF11-206ENST00000474828 FRAS1Q86XX4 4008 aa11.61□□□□□ -0.55
SCAF11-206ENST00000474828 SMIM27A0A1W2PRY6 76 aa11.6□□□□□ -0.55
SCAF11-206ENST00000474828 HIGD1CA8MV81 97 aa11.6□□□□□ -0.55
SCAF11-206ENST00000474828 EVI2AP22794 236 aa11.6□□□□□ -0.55
SCAF11-206ENST00000474828 Q9H8V8 135 aa11.6□□□□□ -0.55
SCAF11-206ENST00000474828 TMEM218A2RU14 115 aa11.59□□□□□ -0.55
SCAF11-206ENST00000474828 FAT2Q9NYQ8 4349 aa11.59□□□□□ -0.55
SCAF11-206ENST00000474828 M0QY20 66 aa11.58□□□□□ -0.56
SCAF11-206ENST00000474828 UBE2D3P61077 147 aa11.58□□□□□ -0.56
SCAF11-206ENST00000474828 UBE2D2P62837 147 aa11.58□□□□□ -0.56
SCAF11-206ENST00000474828 NUP35Q8NFH5 326 aa11.58□□□□□ -0.56
SCAF11-206ENST00000474828 ATP6V0E2Q8NHE4 81 aa11.58□□□□□ -0.56
SCAF11-206ENST00000474828 GTSF1LQ9H1H1 148 aa11.58□□□□□ -0.56
SCAF11-206ENST00000474828 DPH3P1Q9H4G8 78 aa11.58□□□□□ -0.56
SCAF11-206ENST00000474828 TRBV7-3A0A075B6L6 115 aa11.57□□□□□ -0.56
SCAF11-206ENST00000474828 NBDYA0A0U1RRE5 68 aa11.57□□□□□ -0.56
SCAF11-206ENST00000474828 A0A1B0GUT8 65 aa11.57□□□□□ -0.56
SCAF11-206ENST00000474828 SMIM17P0DL12 118 aa11.57□□□□□ -0.56
SCAF11-206ENST00000474828 ADCYAP1P18509 176 aa11.57□□□□□ -0.56
SCAF11-206ENST00000474828 BTF3P20290 206 aaKnown RBP11.57□□□□□ -0.56
SCAF11-206ENST00000474828 TWIST1Q15672 202 aa11.57□□□□□ -0.56
SCAF11-206ENST00000474828 NEXN-AS1Q8NBZ9 246 aa11.57□□□□□ -0.56
SCAF11-206ENST00000474828 FRZBQ92765 325 aa11.57□□□□□ -0.56
SCAF11-206ENST00000474828 PGLYRP4Q96LB8 373 aa11.57□□□□□ -0.56
SCAF11-206ENST00000474828 GAGE12JA6NER3 117 aa11.56□□□□□ -0.56
SCAF11-206ENST00000474828 K7EP13 123 aa11.56□□□□□ -0.56
SCAF11-206ENST00000474828 SSTP61278 116 aa11.56□□□□□ -0.56
SCAF11-206ENST00000474828 GAGE1Q13065 139 aa11.56□□□□□ -0.56
SCAF11-206ENST00000474828 GAGE4Q13068 117 aa11.56□□□□□ -0.56
SCAF11-206ENST00000474828 GAGE5Q13069 117 aa11.56□□□□□ -0.56
SCAF11-206ENST00000474828 ZNF56Q15929 161 aa11.56□□□□□ -0.56
SCAF11-206ENST00000474828 GAGE13Q4V321 117 aa11.56□□□□□ -0.56
SCAF11-206ENST00000474828 C10orf91Q5T1B1 145 aa11.56□□□□□ -0.56
SCAF11-206ENST00000474828 NAT8BQ9UHF3 227 aa11.56□□□□□ -0.56
SCAF11-206ENST00000474828 SIVA1O15304 175 aa11.55□□□□□ -0.56
SCAF11-206ENST00000474828 DNAH10OSP0CZ25 163 aa11.55□□□□□ -0.56
SCAF11-206ENST00000474828 RPL36AP83881 106 aaKnown RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms