RNA–Protein interactions for RNA: ENST00000474637.5

GAPVD1-216, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 2,545 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-216ENST00000474637 Q8TAT8 98 aa3.15□□□□□ -1.91
GAPVD1-216ENST00000474637 PRR25Q96S07 402 aa3.15□□□□□ -1.91
GAPVD1-216ENST00000474637 MS4A6AQ9H2W1 248 aa3.15□□□□□ -1.91
GAPVD1-216ENST00000474637 SMPXQ9UHP9 88 aa3.15□□□□□ -1.91
GAPVD1-216ENST00000474637 IGHV3-66A0A0C4DH42 116 aa3.14□□□□□ -1.91
GAPVD1-216ENST00000474637 D6R8Y8 96 aa3.14□□□□□ -1.91
GAPVD1-216ENST00000474637 K7ERJ3 54 aa3.14□□□□□ -1.91
GAPVD1-216ENST00000474637 CD300EQ496F6 205 aaPredicted RBP3.14□□□□□ -1.91
GAPVD1-216ENST00000474637 PET117Q6UWS5 81 aa3.14□□□□□ -1.91
GAPVD1-216ENST00000474637 ADAMTSL5Q6ZMM2 481 aa3.14□□□□□ -1.91
GAPVD1-216ENST00000474637 AMN1Q8IY45 258 aa3.14□□□□□ -1.91
GAPVD1-216ENST00000474637 AP5S1Q9NUS5 200 aa3.14□□□□□ -1.91
GAPVD1-216ENST00000474637 HSPB8Q9UJY1 196 aa3.14□□□□□ -1.91
GAPVD1-216ENST00000474637 A0A1B0GW15 77 aa3.14□□□□□ -1.91
GAPVD1-216ENST00000474637 PRAC2D3DTV9 90 aa3.14□□□□□ -1.91
GAPVD1-216ENST00000474637 K7EMT4 169 aa3.14□□□□□ -1.91
GAPVD1-216ENST00000474637 ORM1P02763 201 aa3.14□□□□□ -1.91
GAPVD1-216ENST00000474637 SMIM17P0DL12 118 aa3.14□□□□□ -1.91
GAPVD1-216ENST00000474637 GCSHP23434 173 aa3.14□□□□□ -1.91
GAPVD1-216ENST00000474637 WFDC2Q14508 124 aa3.14□□□□□ -1.91
GAPVD1-216ENST00000474637 TWIST1Q15672 202 aa3.14□□□□□ -1.91
GAPVD1-216ENST00000474637 ETDBQ3ZM63 59 aa3.14□□□□□ -1.91
GAPVD1-216ENST00000474637 FAM104BQ5XKR9 115 aa3.14□□□□□ -1.91
GAPVD1-216ENST00000474637 Q6AWC8 147 aa3.14□□□□□ -1.91
GAPVD1-216ENST00000474637 ZNF493Q6ZR52 646 aa3.14□□□□□ -1.91
GAPVD1-216ENST00000474637 FA2HQ7L5A8 372 aa3.14□□□□□ -1.91
GAPVD1-216ENST00000474637 PCP2Q8IVA1 136 aa3.14□□□□□ -1.91
GAPVD1-216ENST00000474637 RNF182Q8N6D2 247 aa3.14□□□□□ -1.91
GAPVD1-216ENST00000474637 OR5A1Q8NGJ0 315 aa3.14□□□□□ -1.91
GAPVD1-216ENST00000474637 GEMIN7Q9H840 131 aaKnown RBP3.14□□□□□ -1.91
GAPVD1-216ENST00000474637 MSRB1Q9NZV6 116 aa3.14□□□□□ -1.91
GAPVD1-216ENST00000474637 IGHV3-49A0A0A0MS15 119 aa3.13□□□□□ -1.91
GAPVD1-216ENST00000474637 SMKR1H3BMG3 65 aa3.13□□□□□ -1.91
GAPVD1-216ENST00000474637 H3BMG7 143 aa3.13□□□□□ -1.91
GAPVD1-216ENST00000474637 BUB3O43684 328 aa3.13□□□□□ -1.91
GAPVD1-216ENST00000474637 IGLV1-51P01701 117 aa3.13□□□□□ -1.91
GAPVD1-216ENST00000474637 KRTAP10-11P60412 298 aa3.13□□□□□ -1.91
GAPVD1-216ENST00000474637 LINC01545Q5VT33 79 aa3.13□□□□□ -1.91
GAPVD1-216ENST00000474637 AMTNQ6UX39 209 aa3.13□□□□□ -1.91
GAPVD1-216ENST00000474637 WFDC3Q8IUB2 231 aa3.13□□□□□ -1.91
GAPVD1-216ENST00000474637 DYNLRB2Q8TF09 96 aa3.13□□□□□ -1.91
GAPVD1-216ENST00000474637 TMEM190Q8WZ59 177 aa3.13□□□□□ -1.91
GAPVD1-216ENST00000474637 PRELID3AQ96N28 172 aa3.13□□□□□ -1.91
GAPVD1-216ENST00000474637 TTTY13Q9BZ97 58 aa3.13□□□□□ -1.91
GAPVD1-216ENST00000474637 DAZ1Q9NQZ3 744 aaKnown RBP3.13□□□□□ -1.91
GAPVD1-216ENST00000474637 ZNF256Q9Y2P7 627 aaPredicted RBP3.13□□□□□ -1.91
GAPVD1-216ENST00000474637 FBN3Q75N90 2809 aa3.13□□□□□ -1.91
GAPVD1-216ENST00000474637 TRAV25A0A0B4J276 109 aa3.13□□□□□ -1.91
GAPVD1-216ENST00000474637 FABP5P3A8MUU1 101 aa3.13□□□□□ -1.91
GAPVD1-216ENST00000474637 FGF6P10767 208 aa3.13□□□□□ -1.91
GAPVD1-216ENST00000474637 SCGB1A1P11684 91 aa3.13□□□□□ -1.91
GAPVD1-216ENST00000474637 CKS2P33552 79 aa3.13□□□□□ -1.91
GAPVD1-216ENST00000474637 CACNG7P62955 275 aa3.13□□□□□ -1.91
GAPVD1-216ENST00000474637 MRPL51Q4U2R6 128 aaKnown RBP3.13□□□□□ -1.91
GAPVD1-216ENST00000474637 LCE2CQ5TA81 110 aa3.13□□□□□ -1.91
GAPVD1-216ENST00000474637 COX8CQ7Z4L0 72 aa3.13□□□□□ -1.91
GAPVD1-216ENST00000474637 ORMDL3Q8N138 153 aa3.13□□□□□ -1.91
GAPVD1-216ENST00000474637 GATD1Q8NB37 220 aa3.13□□□□□ -1.91
GAPVD1-216ENST00000474637 C18orf15Q96N68 181 aa3.13□□□□□ -1.91
GAPVD1-216ENST00000474637 VWFP04275 2813 aa3.12□□□□□ -1.91
GAPVD1-216ENST00000474637 PKD1L1Q8TDX9 2849 aa3.12□□□□□ -1.91
GAPVD1-216ENST00000474637 A0A096LNJ9 63 aa3.12□□□□□ -1.91
GAPVD1-216ENST00000474637 J3QR89 54 aa3.12□□□□□ -1.91
GAPVD1-216ENST00000474637 GAS8-AS1O95177 125 aa3.12□□□□□ -1.91
GAPVD1-216ENST00000474637 SMIM13P0DJ93 91 aa3.12□□□□□ -1.91
GAPVD1-216ENST00000474637 FXYD2P54710 66 aa3.12□□□□□ -1.91
GAPVD1-216ENST00000474637 CFAP161Q6P656 301 aa3.12□□□□□ -1.91
GAPVD1-216ENST00000474637 BOD1L2Q8IYS8 172 aa3.12□□□□□ -1.91
GAPVD1-216ENST00000474637 MRAPQ8TCY5 172 aa3.12□□□□□ -1.91
GAPVD1-216ENST00000474637 SPAG8Q99932 426 aaPredicted RBP3.12□□□□□ -1.91
GAPVD1-216ENST00000474637 AGPAT4-IT1Q9H0P7 198 aa3.12□□□□□ -1.91
GAPVD1-216ENST00000474637 NHP2Q9NX24 153 aaKnown RBP3.12□□□□□ -1.91
GAPVD1-216ENST00000474637 SS18L2Q9UHA2 77 aa3.12□□□□□ -1.91
GAPVD1-216ENST00000474637 U3KQK5 164 aa3.12□□□□□ -1.91
GAPVD1-216ENST00000474637 IGLC6P0CF74 106 aa3.12□□□□□ -1.91
GAPVD1-216ENST00000474637 DEFB114Q30KQ6 69 aa3.12□□□□□ -1.91
GAPVD1-216ENST00000474637 UNQ9165/PRO28630Q6UXU0 137 aa3.12□□□□□ -1.91
GAPVD1-216ENST00000474637 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.12□□□□□ -1.91
GAPVD1-216ENST00000474637 METTL26Q96S19 204 aa3.12□□□□□ -1.91
GAPVD1-216ENST00000474637 IGKV3D-20A0A0C4DH25 116 aa3.11□□□□□ -1.91
GAPVD1-216ENST00000474637 IGHV7-4-1A0A0J9YVY3 117 aa3.11□□□□□ -1.91
GAPVD1-216ENST00000474637 NPYP01303 97 aa3.11□□□□□ -1.91
GAPVD1-216ENST00000474637 CMC4P56277 68 aaPredicted RBP3.11□□□□□ -1.91
GAPVD1-216ENST00000474637 Q6ZQT7 251 aa3.11□□□□□ -1.91
GAPVD1-216ENST00000474637 GTSCR1Q86UQ5 136 aa3.11□□□□□ -1.91
GAPVD1-216ENST00000474637 MRAP2Q96G30 205 aa3.11□□□□□ -1.91
GAPVD1-216ENST00000474637 RNF185Q96GF1 192 aa3.11□□□□□ -1.91
GAPVD1-216ENST00000474637 C20orf78Q9BR46 151 aa3.11□□□□□ -1.91
GAPVD1-216ENST00000474637 SPANXB1Q9NS25 103 aaPredicted RBP3.11□□□□□ -1.91
GAPVD1-216ENST00000474637 WNK1Q9H4A3 2382 aa3.11□□□□□ -1.91
GAPVD1-216ENST00000474637 TRAV8-2A0A0B4J237 113 aa3.11□□□□□ -1.91
GAPVD1-216ENST00000474637 K7EIL1 84 aa3.11□□□□□ -1.91
GAPVD1-216ENST00000474637 GATA1P15976 413 aaPredicted RBP3.11□□□□□ -1.91
GAPVD1-216ENST00000474637 EVI2AP22794 236 aa3.11□□□□□ -1.91
GAPVD1-216ENST00000474637 SPATA25Q9BR10 227 aa3.11□□□□□ -1.91
GAPVD1-216ENST00000474637 C11orf21Q9P2W6 132 aa3.11□□□□□ -1.91
GAPVD1-216ENST00000474637 DKK2Q9UBU2 259 aa3.11□□□□□ -1.91
GAPVD1-216ENST00000474637 MGAM2Q2M2H8 2515 aa3.1□□□□□ -1.91
GAPVD1-216ENST00000474637 TRAV2A0A0B4J234 112 aa3.1□□□□□ -1.91
GAPVD1-216ENST00000474637 RBAKDNA6NC62 111 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms