RNA–Protein interactions for RNA: ENST00000474323.5

SAMM50-203, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 2,368 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-203ENST00000474323 C11orf86A6NJI1 115 aa11.04□□□□□ -0.64
SAMM50-203ENST00000474323 P0DMU3 169 aa11.04□□□□□ -0.64
SAMM50-203ENST00000474323 FAM231AP0DMU4 169 aa11.04□□□□□ -0.64
SAMM50-203ENST00000474323 FAM231CP0DMU5 169 aa11.04□□□□□ -0.64
SAMM50-203ENST00000474323 Q6ZS46 218 aa11.04□□□□□ -0.64
SAMM50-203ENST00000474323 IGLV4-69A0A075B6H9 119 aa11.04□□□□□ -0.64
SAMM50-203ENST00000474323 M0R381 172 aa11.04□□□□□ -0.64
SAMM50-203ENST00000474323 BUB3O43684 328 aa11.04□□□□□ -0.64
SAMM50-203ENST00000474323 CRIP2P52943 208 aaPredicted RBP11.04□□□□□ -0.64
SAMM50-203ENST00000474323 MRPL53Q96EL3 112 aaKnown RBP11.04□□□□□ -0.64
SAMM50-203ENST00000474323 ASH1LQ9NR48 2969 aaKnown RBP11.03□□□□□ -0.64
SAMM50-203ENST00000474323 IGHV1-69DA0A0B4J2H0 117 aa11.03□□□□□ -0.64
SAMM50-203ENST00000474323 PPP1R17O96001 155 aa11.03□□□□□ -0.64
SAMM50-203ENST00000474323 PRB1P04280 392 aa11.03□□□□□ -0.64
SAMM50-203ENST00000474323 RPL13AP40429 203 aaKnown RBP11.03□□□□□ -0.64
SAMM50-203ENST00000474323 DPH3P1Q9H4G8 78 aa11.03□□□□□ -0.64
SAMM50-203ENST00000474323 IGHV3-33P01772 117 aa11.03□□□□□ -0.64
SAMM50-203ENST00000474323 C9orf47Q6ZRZ4 202 aa11.03□□□□□ -0.64
SAMM50-203ENST00000474323 TRPT1Q86TN4 253 aaKnown RBP11.03□□□□□ -0.64
SAMM50-203ENST00000474323 OR10J6PQ8NGY7 276 aa11.03□□□□□ -0.64
SAMM50-203ENST00000474323 NTN5Q8WTR8 489 aaPredicted RBP11.03□□□□□ -0.64
SAMM50-203ENST00000474323 RPL39LQ96EH5 51 aaKnown RBP11.03□□□□□ -0.64
SAMM50-203ENST00000474323 RNF223E7ERA6 249 aa11.02□□□□□ -0.65
SAMM50-203ENST00000474323 TIRAPP58753 221 aa11.02□□□□□ -0.65
SAMM50-203ENST00000474323 ATXN8Q156A1 80 aa11.02□□□□□ -0.65
SAMM50-203ENST00000474323 C11orf71Q6IPW1 123 aa11.02□□□□□ -0.65
SAMM50-203ENST00000474323 ODF3Q96PU9 254 aa11.02□□□□□ -0.65
SAMM50-203ENST00000474323 IGHV3OR16-8A0A075B7F1 116 aa11.01□□□□□ -0.65
SAMM50-203ENST00000474323 TRAV8-4A0A0B4J246 113 aa11.01□□□□□ -0.65
SAMM50-203ENST00000474323 A0A0B4J2C4 111 aa11.01□□□□□ -0.65
SAMM50-203ENST00000474323 SEC61GP60059 68 aa11.01□□□□□ -0.65
SAMM50-203ENST00000474323 PMVKQ15126 192 aa11.01□□□□□ -0.65
SAMM50-203ENST00000474323 FAM159AQ6UWV7 190 aa11.01□□□□□ -0.65
SAMM50-203ENST00000474323 DPM3Q9P2X0 92 aa11.01□□□□□ -0.65
SAMM50-203ENST00000474323 LRRK2Q5S007 2527 aa11.01□□□□□ -0.65
SAMM50-203ENST00000474323 DUSP14O95147 198 aaKnown RBP11.01□□□□□ -0.65
SAMM50-203ENST00000474323 BBC3Q96PG8 261 aaPredicted RBP11.01□□□□□ -0.65
SAMM50-203ENST00000474323 UBTD1Q9HAC8 227 aa11.01□□□□□ -0.65
SAMM50-203ENST00000474323 MRPL23Q16540 153 aaKnown RBP11□□□□□ -0.65
SAMM50-203ENST00000474323 C15orf53Q8NAA6 179 aa11□□□□□ -0.65
SAMM50-203ENST00000474323 TMEM263Q8WUH6 116 aaKnown RBP11□□□□□ -0.65
SAMM50-203ENST00000474323 TSHBP01222 138 aa10.99□□□□□ -0.65
SAMM50-203ENST00000474323 TSPEAR-AS2P59090 65 aa10.99□□□□□ -0.65
SAMM50-203ENST00000474323 LINC01620Q4KN68 170 aa10.99□□□□□ -0.65
SAMM50-203ENST00000474323 Q6ZQT7 251 aa10.99□□□□□ -0.65
SAMM50-203ENST00000474323 AMELXQ99217 191 aa10.99□□□□□ -0.65
SAMM50-203ENST00000474323 FAM208BQ5VWN6 2430 aa10.99□□□□□ -0.65
SAMM50-203ENST00000474323 ARHGAP32A7KAX9 2087 aa10.99□□□□□ -0.65
SAMM50-203ENST00000474323 IGHV3-35A0A0C4DH35 117 aa10.99□□□□□ -0.65
SAMM50-203ENST00000474323 IGIPA6NJ69 53 aa10.99□□□□□ -0.65
SAMM50-203ENST00000474323 NDPQ00604 133 aa10.99□□□□□ -0.65
SAMM50-203ENST00000474323 HES1Q14469 280 aa10.99□□□□□ -0.65
SAMM50-203ENST00000474323 C14orf178Q8N769 122 aaPredicted RBP10.99□□□□□ -0.65
SAMM50-203ENST00000474323 TMEM141Q96I45 108 aa10.99□□□□□ -0.65
SAMM50-203ENST00000474323 ZFAND3Q9H8U3 227 aa10.99□□□□□ -0.65
SAMM50-203ENST00000474323 MDFICQ9P1T7 246 aa10.99□□□□□ -0.65
SAMM50-203ENST00000474323 LENEPQ9Y5L5 61 aa10.99□□□□□ -0.65
SAMM50-203ENST00000474323 MED13LQ71F56 2210 aa10.99□□□□□ -0.65
SAMM50-203ENST00000474323 TRBV10-2A0A0K0K1G8 114 aa10.98□□□□□ -0.65
SAMM50-203ENST00000474323 J3QQQ9 107 aa10.98□□□□□ -0.65
SAMM50-203ENST00000474323 SPG11Q96JI7 2443 aa10.98□□□□□ -0.65
SAMM50-203ENST00000474323 CRYBG3Q68DQ2 2970 aa10.98□□□□□ -0.65
SAMM50-203ENST00000474323 TMEM170BQ5T4T1 132 aa10.98□□□□□ -0.65
SAMM50-203ENST00000474323 GPHB5Q86YW7 130 aa10.98□□□□□ -0.65
SAMM50-203ENST00000474323 LRRC75A-AS1Q8N1F1 130 aa10.98□□□□□ -0.65
SAMM50-203ENST00000474323 CENPEQ02224 2701 aa10.98□□□□□ -0.65
SAMM50-203ENST00000474323 MAP1AP78559 2803 aaPredicted RBP10.97□□□□□ -0.65
SAMM50-203ENST00000474323 TEX49A0A1B0GTD5 131 aa10.97□□□□□ -0.65
SAMM50-203ENST00000474323 LGALS3P17931 250 aaKnown RBP10.97□□□□□ -0.65
SAMM50-203ENST00000474323 EMP1P54849 157 aa10.97□□□□□ -0.65
SAMM50-203ENST00000474323 MEIG1Q5JSS6 88 aa10.97□□□□□ -0.65
SAMM50-203ENST00000474323 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.97□□□□□ -0.65
SAMM50-203ENST00000474323 LGALS9O00182 355 aa10.97□□□□□ -0.65
SAMM50-203ENST00000474323 EIF4EBP3O60516 100 aaPredicted RBP10.97□□□□□ -0.65
SAMM50-203ENST00000474323 TIMM17AQ99595 171 aa10.97□□□□□ -0.65
SAMM50-203ENST00000474323 TP53TG1Q9Y2A0 90 aa10.97□□□□□ -0.65
SAMM50-203ENST00000474323 PHLDA3Q9Y5J5 127 aa10.97□□□□□ -0.65
SAMM50-203ENST00000474323 MGPP08493 103 aa10.96□□□□□ -0.65
SAMM50-203ENST00000474323 S100A4P26447 101 aaKnown RBP10.96□□□□□ -0.65
SAMM50-203ENST00000474323 TRAV2A0A0B4J234 112 aa10.96□□□□□ -0.66
SAMM50-203ENST00000474323 H3BMM0 161 aa10.96□□□□□ -0.66
SAMM50-203ENST00000474323 MED14OSP0DP75 135 aa10.96□□□□□ -0.66
SAMM50-203ENST00000474323 UBE2WQ96B02 151 aa10.96□□□□□ -0.66
SAMM50-203ENST00000474323 TMEM126AQ9H061 195 aa10.96□□□□□ -0.66
SAMM50-203ENST00000474323 IGHV3-66A0A0C4DH42 116 aa10.95□□□□□ -0.66
SAMM50-203ENST00000474323 TRBV30A0A0K0K1B3 111 aa10.95□□□□□ -0.66
SAMM50-203ENST00000474323 CLPSL1A2RUU4 121 aa10.95□□□□□ -0.66
SAMM50-203ENST00000474323 ZNF876PQ49A33 203 aa10.95□□□□□ -0.66
SAMM50-203ENST00000474323 PRR9Q5T870 116 aa10.95□□□□□ -0.66
SAMM50-203ENST00000474323 POM121L12Q8N7R1 296 aa10.95□□□□□ -0.66
SAMM50-203ENST00000474323 WNK2Q9Y3S1 2297 aa10.95□□□□□ -0.66
SAMM50-203ENST00000474323 ZNRF2Q8NHG8 242 aa10.95□□□□□ -0.66
SAMM50-203ENST00000474323 UBR5O95071 2799 aaPredicted RBP10.94□□□□□ -0.66
SAMM50-203ENST00000474323 IGHV4OR15-8A0A075B7B6 117 aa10.94□□□□□ -0.66
SAMM50-203ENST00000474323 A0A087WW49 117 aa10.94□□□□□ -0.66
SAMM50-203ENST00000474323 TRAV21A0A0B4J279 112 aa10.94□□□□□ -0.66
SAMM50-203ENST00000474323 H7C2G1 150 aa10.94□□□□□ -0.66
SAMM50-203ENST00000474323 LY6G5BQ8NDX9 201 aa10.94□□□□□ -0.66
SAMM50-203ENST00000474323 Q1RN00 199 aa10.94□□□□□ -0.66
SAMM50-203ENST00000474323 MUSTN1Q8IVN3 82 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms